| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_004588 |
Definition |
Streptococcus prophage 315.5, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales. |
DB of origin |
REFSEQ |
Length |
38206 |
Host Name |
Streptococcus pyogenes |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
38.08 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_795622.1 | NC_004588_p18 | hypothetical protein | phrog_1921 | unknown function | unknown function | 1 | 10514 | 10870 |
| NP_795626.1 | NC_004588_p22 | hypothetical protein | phrog_13581 | unknown function | unknown function | 1 | 12257 | 12592 |
| NP_795635.1 | NC_004588_p31 | hypothetical protein | phrog_903 | unknown function | unknown function | 1 | 19081 | 19347 |
| NP_795615.1 | NC_004588_p11 | hypothetical protein | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 5195 | 5875 |
| NP_795653.1 | NC_004588_p49 | cell wall hydrolase, lysin | phrog_1309 | endolysin | lysis | 1 | 33787 | 34551 |
| NP_795631.1 | NC_004588_p27 | terminase large subunit | phrog_8711 | terminase large subunit | head and packaging | 1 | 15574 | 15864 |
| NP_795619.1 | NC_004588_p15 | DNA primase | phrog_12939 | DNA primase | DNA, RNA and nucleotide metabolism | 1 | 8485 | 9039 |
| NP_795637.1 | NC_004588_p33 | hypothetical protein | phrog_544 | major head protein | head and packaging | 1 | 20087 | 20977 |
| NP_795651.1 | NC_004588_p47 | hypothetical protein | phrog_1382 | unknown function | unknown function | 1 | 32953 | 33117 |
| NP_795659.1 | NC_004588_p55 | hypothetical protein | phrog_2133 | unknown function | unknown function | 1 | 37936 | 38118 |
| NP_795606.1 | NC_004588_p2 | hypothetical protein | phrog_17596 | unknown function | unknown function | -1 | 1490 | 2080 |
| NP_795641.1 | NC_004588_p37 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 21958 | 22341 |
| NP_795652.1 | NC_004588_p48 | holin | phrog_608 | holin | lysis | 1 | 33453 | 33785 |
| NP_795621.1 | NC_004588_p17 | hypothetical protein | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 10210 | 10530 |
| NP_795646.1 | NC_004588_p42 | platlet-binding protein, minor tail fiber protein | phrog_3981 | tail length tape measure protein | tail | 1 | 24025 | 25830 |
| NP_795639.1 | NC_004588_p35 | hypothetical protein | phrog_132 | head-tail adaptor | connector | 1 | 21297 | 21641 |
| NP_795611.1 | NC_004588_p7 | hypothetical protein | phrog_668 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 3734 | 3985 |
| NP_795605.1 | NC_004588_p1 | phage integrase | phrog_1 | integrase | integration and excision | -1 | 150 | 1316 |
| NP_795632.1 | NC_004588_p28 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 16051 | 16872 |
| NP_795643.1 | NC_004588_p39 | hypothetical protein | phrog_1407 | major tail protein | tail | 1 | 22765 | 23271 |
| NP_795633.1 | NC_004588_p29 | hypothetical protein | phrog_64 | portal protein | head and packaging | 1 | 16908 | 18197 |
| NP_795618.1 | NC_004588_p14 | hypothetical protein | phrog_695 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 7692 | 8495 |
| NP_795650.1 | NC_004588_p46 | hypothetical protein | phrog_1060 | unknown function | unknown function | 1 | 32634 | 32981 |
| NP_795649.1 | NC_004588_p45 | minor structural protein | phrog_372 | tail protein | tail | 1 | 30854 | 32623 |
| NP_795634.1 | NC_004588_p30 | hypothetical protein | phrog_115 | minor head protein | head and packaging | 1 | 18166 | 19074 |
| NP_795608.1 | NC_004588_p4 | cI-like repressor, metallo-prtoeinase motif | phrog_87 | metallo-protease | other | -1 | 2512 | 2889 |
| NP_795609.1 | NC_004588_p5 | cI-like repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2873 | 3232 |
| NP_795644.1 | NC_004588_p40 | hypothetical protein | phrog_2115 | tail protein | tail | 1 | 23284 | 23601 |
| NP_795647.1 | NC_004588_p43 | minor structural protein | phrog_202 | distal tail protein Dit | tail | 1 | 25831 | 27315 |
| NP_795656.1 | NC_004588_p52 | hypothetical protein | phrog_10259 | unknown function | unknown function | 1 | 35959 | 36180 |
| NP_795624.1 | NC_004588_p20 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 11393 | 11806 |
| NP_795638.1 | NC_004588_p34 | hypothetical protein | phrog_390 | Arc-like repressor | transcription regulation | 1 | 20990 | 21283 |
| NP_795616.1 | NC_004588_p12 | helicase | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 5977 | 7206 |
| NP_795636.1 | NC_004588_p32 | hypothetical protein | phrog_172 | head scaffolding protein | head and packaging | 1 | 19497 | 20069 |
| NP_795655.1 | NC_004588_p51 | hypothetical protein | phrog_8309 | unknown function | unknown function | 1 | 35176 | 35949 |
| NP_795654.1 | NC_004588_p50 | hypothetical protein | phrog_10272 | unknown function | unknown function | 1 | 34563 | 35165 |
| NP_795642.1 | NC_004588_p38 | hypothetical protein | phrog_176 | tail terminator | connector | 1 | 22343 | 22753 |
| NP_795657.1 | NC_004588_p53 | hypothetical protein | phrog_5239 | unknown function | unknown function | 1 | 36180 | 36839 |
| NP_795625.1 | NC_004588_p21 | hypothetical protein | phrog_2625 | unknown function | unknown function | 1 | 11803 | 11973 |
| NP_795627.1 | NC_004588_p23 | hypothetical protein | phrog_11337 | unknown function | unknown function | 1 | 12758 | 12943 |
| NP_795607.1 | NC_004588_p3 | hypothetical protein | phrog_19909 | unknown function | unknown function | -1 | 2349 | 2501 |
| NP_795617.1 | NC_004588_p13 | hypothetical protein | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 7222 | 7680 |
| NP_795648.1 | NC_004588_p44 | tail protein | phrog_588 | tail fiber protein and host specificity | tail | 1 | 27316 | 30756 |
| NP_795645.1 | NC_004588_p41 | hypothetical protein | phrog_7423 | unknown function | unknown function | 1 | 23574 | 24032 |
| NP_795630.1 | NC_004588_p26 | hypothetical protein | phrog_2538 | terminase small subunit | head and packaging | 1 | 15252 | 15608 |
| NP_795658.1 | NC_004588_p54 | exotoxin type A precursor | phrog_1753 | enterotoxin type A / speL | moron, auxiliary metabolic gene and host takeover | -1 | 36961 | 37716 |
| NP_795610.1 | NC_004588_p6 | Cro-like repressor | phrog_3 | transcriptional repressor | transcription regulation | 1 | 3421 | 3639 |
| NP_795613.1 | NC_004588_p9 | hypothetical protein | phrog_8 | transcriptional regulator | transcription regulation | 1 | 4169 | 4483 |
| NP_795623.1 | NC_004588_p19 | hypothetical protein | phrog_236 | nucleotide kinase | other | 1 | 11112 | 11396 |
| NP_795640.1 | NC_004588_p36 | hypothetical protein | phrog_793 | head-tail adaptor | connector | 1 | 21638 | 21949 |
| NP_795612.1 | NC_004588_p8 | hypothetical protein | phrog_1022 | unknown function | unknown function | 1 | 4016 | 4153 |
| NP_795620.1 | NC_004588_p16 | DNA primase | phrog_7601 | unknown function | unknown function | 1 | 9087 | 9965 |
| NP_795629.1 | NC_004588_p25 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 14184 | 14618 |
| NP_795614.1 | NC_004588_p10 | hypothetical protein | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 4712 | 5194 |
| NP_795628.1 | NC_004588_p24 | hypothetical protein | phrog_121 | unknown function | unknown function | 1 | 13230 | 13733 |