Genomic map of Staphylococcus phage P68 (NC_004679)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004679
Definition
Staphylococcus phage phiP68, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rakietenvirinae; Rosenblumvirus; unclassified Rosenblumvirus.
DB of origin
REFSEQ
Length
18227
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
22
%GC
29.32
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_817317.1 NC_004679_p1 hypothetical protein phrog_10178 unknown function unknown function 1 342 539
NP_817327.1 NC_004679_p11 hypothetical protein phrog_5979 unknown function unknown function -1 6477 7916
NP_817330.1 NC_004679_p14 minor tail protein phrog_9604 tail protein tail -1 10136 11581
NP_817321.1 NC_004679_p5 hypothetical protein phrog_7019 unknown function unknown function 1 1529 1705
NP_817329.1 NC_004679_p13 tail protein phrog_2248 tail protein tail -1 8315 10078
NP_817331.1 NC_004679_p15 holin phrog_20374 holin lysis -1 11619 11897
NP_817336.1 NC_004679_p20 major capsid protein phrog_2006 major head protein head and packaging -1 16111 17337
NP_817337.1 NC_004679_p21 hypothetical protein phrog_6289 unknown function unknown function -1 17344 17526
NP_817323.1 NC_004679_p7 hypothetical protein phrog_8543 unknown function unknown function 1 2111 2278
NP_817324.1 NC_004679_p8 hypothetical protein phrog_6099 unknown function unknown function 1 2284 2766
NP_817328.1 NC_004679_p12 holin phrog_199 holin lysis -1 7891 8313
NP_817320.1 NC_004679_p4 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 1111 1479
NP_817325.1 NC_004679_p9 encapsidation protein phrog_2150 terminase head and packaging 1 2925 4061
NP_817326.1 NC_004679_p10 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 4095 6362
NP_817322.1 NC_004679_p6 hypothetical protein phrog_7529 unknown function unknown function 1 1708 2118
NP_817334.1 NC_004679_p18 lower collar protein phrog_3225 adaptor Ad4 connector -1 14365 15120
NP_817335.1 NC_004679_p19 upper collar protein phrog_2038 upper collar connector connector -1 15113 15862
NP_817338.1 NC_004679_p22 hypothetical protein phrog_7102 unknown function unknown function -1 17540 17941
NP_817333.1 NC_004679_p17 minor structural protein phrog_287 minor tail protein tail -1 12408 14351
NP_817319.1 NC_004679_p3 hypothetical protein phrog_6346 unknown function unknown function 1 852 1088
NP_817332.1 NC_004679_p16 amidase phrog_635 endolysin lysis -1 11644 12396
NP_817318.1 NC_004679_p2 hypothetical protein phrog_6274 unknown function unknown function 1 532 834