Genomic map of Mycobacterium virus Che8 (NC_004680)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004680
Definition
Mycobacterium phage Che8, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
REFSEQ
Length
59471
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
112
%GC
61.3
Number of singletons
4
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_817369.1 NC_004680_p31 protein of an unannotated phage phrog_747 unknown function unknown function 1 26452 26685
NP_817385.1 NC_004680_p47 protein of an unannotated phage phrog_1948 unknown function unknown function -1 34349 34798
NP_817435.1 NC_004680_p97 protein of an unannotated phage phrog_35961 unknown function unknown function 1 52534 52749
NP_817434.1 NC_004680_p96 protein of an unannotated phage phrog_1545 unknown function unknown function 1 52400 52537
NP_817436.1 NC_004680_p98 protein of an unannotated phage phrog_2278 unknown function unknown function 1 52840 53139
NP_817396.1 NC_004680_p58 protein of an unannotated phage phrog_1849 unknown function unknown function 1 40131 40412
NP_817432.1 NC_004680_p94 protein of an unannotated phage phrog_722 unknown function unknown function 1 51967 52191
NP_817391.1 NC_004680_p53 protein of an unannotated phage phrog_35596 unknown function unknown function 1 37841 38122
NP_817371.1 NC_004680_p33 protein of an unannotated phage phrog_102 endolysin lysis 1 27956 28957
NP_817386.1 NC_004680_p48 protein of an unannotated phage phrog_2838 transcriptional repressor transcription regulation -1 35062 35754
NP_817424.1 NC_004680_p86 protein of an unannotated phage phrog_647 unknown function unknown function 1 49873 50157
NP_817348.1 NC_004680_p10 protein of an unannotated phage phrog_813 head-tail adaptor connector 1 7099 7503
NP_817393.1 NC_004680_p55 protein of an unannotated phage phrog_780 unknown function unknown function 1 38307 38549
NP_817392.1 NC_004680_p54 protein of an unannotated phage phrog_1816 unknown function unknown function 1 38119 38310
NP_817450.1 NC_004680_p112 protein of an unannotated phage phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 58973 59299
NP_817339.1 NC_004680_p1 protein of an unannotated phage phrog_226 minor tail protein tail 1 108 563
NP_817400.1 NC_004680_p62 protein of an unannotated phage phrog_1333 unknown function unknown function 1 41667 42161
NP_817426.1 NC_004680_p88 protein of an unannotated phage phrog_5892 unknown function unknown function 1 50515 50670
NP_817389.1 NC_004680_p51 protein of an unannotated phage phrog_2025 unknown function unknown function 1 37302 37517
NP_817441.1 NC_004680_p103 protein of an unannotated phage phrog_1694 unknown function unknown function 1 54897 55055
NP_817417.1 NC_004680_p79 protein of an unannotated phage phrog_4296 unknown function unknown function 1 47586 47948
NP_817431.1 NC_004680_p93 protein of an unannotated phage singleton unknown function unknown function 1 51824 51970
NP_817411.1 NC_004680_p73 protein of an unannotated phage phrog_2704 unknown function unknown function 1 45889 46035
NP_817429.1 NC_004680_p91 protein of an unannotated phage phrog_1901 unknown function unknown function 1 51256 51447
NP_817406.1 NC_004680_p68 protein of an unannotated phage phrog_2060 DNA methyltransferase other 1 43878 44219
NP_817405.1 NC_004680_p67 protein of an unannotated phage phrog_1834 unknown function unknown function 1 43651 43881
NP_817423.1 NC_004680_p85 protein of an unannotated phage phrog_722 unknown function unknown function 1 49487 49876
NP_817419.1 NC_004680_p81 protein of an unannotated phage phrog_7196 unknown function unknown function 1 48149 48442
NP_817403.1 NC_004680_p65 protein of an unannotated phage phrog_1333 unknown function unknown function 1 42852 43499
NP_817363.1 NC_004680_p25 protein of an unannotated phage phrog_754 minor tail protein tail 1 24294 25256
NP_817445.1 NC_004680_p107 protein of an unannotated phage phrog_2057 unknown function unknown function 1 55992 56153
NP_817384.1 NC_004680_p46 protein of an unannotated phage phrog_1 integrase integration and excision 1 32977 34287
NP_817421.1 NC_004680_p83 protein of an unannotated phage phrog_1573 DNA methyltransferase other 1 48983 49318
NP_817425.1 NC_004680_p87 protein of an unannotated phage phrog_2021 unknown function unknown function 1 50150 50518
NP_817410.1 NC_004680_p72 protein of an unannotated phage phrog_6573 unknown function unknown function 1 45785 45889
NP_817358.1 NC_004680_p20 protein of an unannotated phage phrog_382 minor tail protein with lysin activity tail 1 19961 21847
NP_817360.1 NC_004680_p22 protein of an unannotated phage phrog_240 head protein head and packaging 1 23028 23369
NP_817430.1 NC_004680_p92 protein of an unannotated phage phrog_1573 DNA methyltransferase other 1 51444 51827
NP_817440.1 NC_004680_p102 protein of an unannotated phage phrog_1869 unknown function unknown function 1 54727 54891
NP_817444.1 NC_004680_p106 protein of an unannotated phage phrog_1385 unknown function unknown function 1 55704 55970
NP_817422.1 NC_004680_p84 protein of an unannotated phage phrog_2740 unknown function unknown function 1 49311 49490
NP_817378.1 NC_004680_p40 protein of an unannotated phage phrog_21631 unknown function unknown function -1 31138 31407
NP_817447.1 NC_004680_p109 protein of an unannotated phage phrog_1721 galactosyl transferase moron, auxiliary metabolic gene and host takeover 1 57342 58040
NP_817428.1 NC_004680_p90 protein of an unannotated phage phrog_6727 unknown function unknown function 1 51074 51259
NP_817359.1 NC_004680_p21 protein of an unannotated phage phrog_2106 minor tail protein tail 1 21844 23010
NP_817439.1 NC_004680_p101 protein of an unannotated phage phrog_2259 Rnase H DNA, RNA and nucleotide metabolism 1 54030 54587
NP_817415.1 NC_004680_p77 protein of an unannotated phage phrog_5500 unknown function unknown function 1 46469 46687
NP_817370.1 NC_004680_p32 protein of an unannotated phage phrog_700 endolysin lysis 1 26682 27956
NP_817404.1 NC_004680_p66 protein of an unannotated phage phrog_2078 unknown function unknown function 1 43499 43651
NP_817353.1 NC_004680_p15 protein of an unannotated phage phrog_106 minor tail protein tail 1 13036 14745
NP_817345.1 NC_004680_p7 protein of an unannotated phage phrog_2377 head-tail adaptor Ad1 connector 1 5881 6450
NP_817443.1 NC_004680_p105 protein of an unannotated phage phrog_1186 unknown function unknown function 1 55306 55707
NP_817449.1 NC_004680_p111 protein of an unannotated phage singleton unknown function unknown function 1 58693 58989
NP_817438.1 NC_004680_p100 protein of an unannotated phage phrog_1467 unknown function unknown function 1 53401 54033
NP_817399.1 NC_004680_p61 protein of an unannotated phage phrog_658 unknown function unknown function 1 41322 41666
NP_817350.1 NC_004680_p12 protein of an unannotated phage phrog_621 tail assembly chaperone tail 1 8536 9087
NP_817383.1 NC_004680_p45 protein of an unannotated phage phrog_32039 unknown function unknown function -1 32379 32597
NP_817375.1 NC_004680_p37 protein of an unannotated phage phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29821 30642
NP_817352.1 NC_004680_p14 protein of an unannotated phage phrog_1942 tail length tape measure protein tail 1 9469 13035
NP_817401.1 NC_004680_p63 protein of an unannotated phage phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 42158 42505
NP_817357.1 NC_004680_p19 protein of an unannotated phage phrog_346 minor tail protein tail 1 18453 19964
NP_817418.1 NC_004680_p80 protein of an unannotated phage phrog_2080 unknown function unknown function 1 47941 48165
NP_817412.1 NC_004680_p74 protein of an unannotated phage phrog_2070 unknown function unknown function 1 46032 46193
NP_817342.1 NC_004680_p4 protein of an unannotated phage phrog_1522 head maturation protease head and packaging 1 3596 4351
NP_817380.1 NC_004680_p42 protein of an unannotated phage phrog_10332 unknown function unknown function -1 31754 31948
NP_817397.1 NC_004680_p59 protein of an unannotated phage phrog_15773 unknown function unknown function 1 40409 41215
NP_817408.1 NC_004680_p70 protein of an unannotated phage phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 45094 45456
NP_817448.1 NC_004680_p110 protein of an unannotated phage phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 58037 58672
NP_817354.1 NC_004680_p16 protein of an unannotated phage phrog_110 minor tail protein tail 1 14833 16542
NP_817351.1 NC_004680_p13 protein of an unannotated phage phrog_15976 tail assembly chaperone tail 1 8969 9472
NP_817346.1 NC_004680_p8 protein of an unannotated phage phrog_763 head-tail adaptor connector 1 6447 6776
NP_817347.1 NC_004680_p9 protein of an unannotated phage phrog_1929 head-tail connector protein connector 1 6783 7109
NP_817373.1 NC_004680_p35 protein of an unannotated phage phrog_404 minor tail protein tail 1 29203 29577
NP_817420.1 NC_004680_p82 protein of an unannotated phage phrog_3032 unknown function unknown function 1 48630 48986
NP_817364.1 NC_004680_p26 protein of an unannotated phage phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25253 25432
NP_817394.1 NC_004680_p56 protein of an unannotated phage phrog_1797 unknown function unknown function 1 38546 39160
NP_817355.1 NC_004680_p17 protein of an unannotated phage phrog_732 minor tail protein tail 1 16584 17429
NP_817381.1 NC_004680_p43 protein of an unannotated phage phrog_5648 unknown function unknown function -1 31950 32186
NP_817374.1 NC_004680_p36 protein of an unannotated phage phrog_2004 unknown function unknown function 1 29574 29834
NP_817361.1 NC_004680_p23 protein of an unannotated phage phrog_2005 minor tail protein tail 1 23388 23645
NP_817416.1 NC_004680_p78 protein of an unannotated phage phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 46684 47589
NP_817376.1 NC_004680_p38 protein of an unannotated phage phrog_1791 unknown function unknown function 1 30658 30948
NP_817341.1 NC_004680_p3 protein of an unannotated phage phrog_104 portal protein head and packaging 1 2239 3609
NP_817433.1 NC_004680_p95 protein of an unannotated phage phrog_1091 unknown function unknown function 1 52188 52400
NP_817367.1 NC_004680_p29 protein of an unannotated phage phrog_932 unknown function unknown function 1 26100 26249
NP_817390.1 NC_004680_p52 protein of an unannotated phage phrog_66 excisionase and transcriptional regulator integration and excision 1 37603 37800
NP_817382.1 NC_004680_p44 protein of an unannotated phage phrog_5497 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 32188 32382
NP_817409.1 NC_004680_p71 protein of an unannotated phage phrog_6938 unknown function unknown function 1 45453 45788
NP_817395.1 NC_004680_p57 protein of an unannotated phage phrog_3416 unknown function unknown function 1 39190 40053
NP_817343.1 NC_004680_p5 protein of an unannotated phage phrog_2592 head scaffolding protein head and packaging 1 4397 5032
NP_817388.1 NC_004680_p50 protein of an unannotated phage phrog_5253 unknown function unknown function 1 37006 37305
NP_817365.1 NC_004680_p27 protein of an unannotated phage phrog_411 unknown function unknown function 1 25601 25897
NP_817446.1 NC_004680_p108 protein of an unannotated phage phrog_8858 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 56170 57345
NP_817402.1 NC_004680_p64 protein of an unannotated phage phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 42502 42855
NP_817349.1 NC_004680_p11 protein of an unannotated phage phrog_476 major tail protein tail 1 7613 8422
NP_817379.1 NC_004680_p41 protein of an unannotated phage phrog_7977 unknown function unknown function -1 31492 31761
NP_817442.1 NC_004680_p104 protein of an unannotated phage phrog_3813 unknown function unknown function 1 55052 55309
NP_817407.1 NC_004680_p69 protein of an unannotated phage phrog_1366 unknown function unknown function 1 44216 45097
NP_817427.1 NC_004680_p89 protein of an unannotated phage phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 50716 51087
NP_817366.1 NC_004680_p28 protein of an unannotated phage phrog_9026 unknown function unknown function 1 25894 26103
NP_817372.1 NC_004680_p34 protein of an unannotated phage phrog_443 holin lysis 1 28973 29206
NP_817344.1 NC_004680_p6 protein of an unannotated phage phrog_267 major head protein head and packaging 1 5051 5872
NP_817340.1 NC_004680_p2 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 571 2208
NP_817398.1 NC_004680_p60 protein of an unannotated phage singleton unknown function unknown function 1 41212 41319
NP_817356.1 NC_004680_p18 protein of an unannotated phage singleton unknown function unknown function 1 17426 18448
NP_817377.1 NC_004680_p39 protein of an unannotated phage phrog_1839 unknown function unknown function 1 30938 31033
NP_817387.1 NC_004680_p49 protein of an unannotated phage phrog_130 anti-repressor Ant transcription regulation 1 36143 37009
NP_817362.1 NC_004680_p24 protein of an unannotated phage phrog_2012 minor tail protein tail 1 23659 24297
NP_817413.1 NC_004680_p75 protein of an unannotated phage phrog_1311 unknown function unknown function 1 46186 46350
NP_817368.1 NC_004680_p30 protein of an unannotated phage phrog_1172 unknown function unknown function 1 26246 26386
NP_817437.1 NC_004680_p99 protein of an unannotated phage phrog_2247 unknown function unknown function 1 53132 53404
NP_817414.1 NC_004680_p76 protein of an unannotated phage phrog_6193 unknown function unknown function 1 46350 46472