Genomic map of Mycobacterium phage Rosebush (NC_004684)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004684
Definition
Mycobacterium phage Rosebush, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus.
DB of origin
REFSEQ
Length
67480
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
90
%GC
68.95
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_817805.1 NC_004684_p44 protein of an unannotated phage phrog_955 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 39588 39977
NP_817762.1 NC_004684_p1 protein of an unannotated phage phrog_723 ParB-like partition protein DNA, RNA and nucleotide metabolism 1 1 792
NP_817820.1 NC_004684_p59 protein of an unannotated phage phrog_3835 unknown function unknown function -1 53496 53936
NP_817776.1 NC_004684_p15 protein of an unannotated phage phrog_777 major head protein head and packaging 1 12528 14555
NP_817834.1 NC_004684_p73 protein of an unannotated phage phrog_7463 unknown function unknown function -1 60155 60463
NP_817814.1 NC_004684_p53 protein of an unannotated phage phrog_1371 unknown function unknown function -1 47278 47769
NP_817782.1 NC_004684_p21 protein of an unannotated phage phrog_792 major tail protein tail 1 17693 18772
NP_817786.1 NC_004684_p25 protein of an unannotated phage phrog_810 unknown function unknown function 1 20029 20589
NP_817825.1 NC_004684_p64 protein of an unannotated phage phrog_7544 unknown function unknown function 1 55868 56209
NP_817835.1 NC_004684_p74 protein of an unannotated phage phrog_7367 unknown function unknown function -1 60460 60771
NP_817839.1 NC_004684_p78 protein of an unannotated phage phrog_8500 unknown function unknown function -1 61957 62118
NP_817778.1 NC_004684_p17 protein of an unannotated phage phrog_970 unknown function unknown function 1 15467 16216
NP_817766.1 NC_004684_p5 protein of an unannotated phage phrog_2076 QueE-like radical SAM domain moron, auxiliary metabolic gene and host takeover 1 3075 3788
NP_817793.1 NC_004684_p32 protein of an unannotated phage phrog_346 minor tail protein tail 1 30088 32808
NP_817846.1 NC_004684_p85 protein of an unannotated phage phrog_7689 unknown function unknown function -1 65303 65449
NP_817821.1 NC_004684_p60 protein of an unannotated phage phrog_982 unknown function unknown function -1 54189 54491
NP_817843.1 NC_004684_p82 protein of an unannotated phage phrog_1010 unknown function unknown function -1 63221 63817
NP_817806.1 NC_004684_p45 protein of an unannotated phage phrog_636 unknown function unknown function -1 40052 40816
NP_817791.1 NC_004684_p30 protein of an unannotated phage phrog_838 unknown function unknown function 1 27603 29039
NP_817824.1 NC_004684_p63 protein of an unannotated phage phrog_1016 unknown function unknown function 1 55576 55836
NP_817767.1 NC_004684_p6 protein of an unannotated phage phrog_2197 GTP cyclohydrolase other 1 3788 4363
NP_817849.1 NC_004684_p88 protein of an unannotated phage phrog_9162 unknown function unknown function -1 65909 66271
NP_817818.1 NC_004684_p57 protein of an unannotated phage phrog_3025 unknown function unknown function -1 52634 53017
NP_817807.1 NC_004684_p46 protein of an unannotated phage phrog_317 endolysin lysis 1 40912 42423
NP_817837.1 NC_004684_p76 protein of an unannotated phage phrog_7525 unknown function unknown function -1 61177 61494
NP_817797.1 NC_004684_p36 protein of an unannotated phage phrog_282 unknown function unknown function 1 34804 35448
NP_817770.1 NC_004684_p9 protein of an unannotated phage phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 6678 7166
NP_817830.1 NC_004684_p69 protein of an unannotated phage phrog_960 HNH endonuclease DNA, RNA and nucleotide metabolism -1 58760 59062
NP_817789.1 NC_004684_p28 protein of an unannotated phage phrog_6941 unknown function unknown function 1 21435 21920
NP_817794.1 NC_004684_p33 protein of an unannotated phage phrog_416 minor tail protein tail 1 32811 33974
NP_817772.1 NC_004684_p11 protein of an unannotated phage phrog_781 unknown function unknown function 1 7480 7818
NP_817815.1 NC_004684_p54 protein of an unannotated phage phrog_906 DNA polymerase/primase DNA, RNA and nucleotide metabolism -1 47834 50596
NP_817774.1 NC_004684_p13 protein of an unannotated phage phrog_859 portal protein head and packaging 1 9734 12181
NP_817784.1 NC_004684_p23 protein of an unannotated phage phrog_1318 unknown function unknown function -1 18945 19346
NP_817768.1 NC_004684_p7 protein of an unannotated phage phrog_38 terminase large subunit head and packaging 1 4347 6041
NP_817836.1 NC_004684_p75 protein of an unannotated phage phrog_8341 unknown function unknown function -1 60834 61079
NP_817826.1 NC_004684_p65 protein of an unannotated phage phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 56206 56859
NP_817845.1 NC_004684_p84 protein of an unannotated phage phrog_2972 unknown function unknown function -1 64973 65230
NP_817811.1 NC_004684_p50 protein of an unannotated phage phrog_16 DNA helicase DNA, RNA and nucleotide metabolism -1 44994 46709
NP_817779.1 NC_004684_p18 protein of an unannotated phage phrog_2272 unknown function unknown function 1 16253 16795
NP_817803.1 NC_004684_p42 protein of an unannotated phage phrog_2804 virion structural protein head and packaging 1 38659 39354
NP_817840.1 NC_004684_p79 protein of an unannotated phage phrog_1933 unknown function unknown function -1 62120 62332
NP_817795.1 NC_004684_p34 protein of an unannotated phage phrog_240 head protein head and packaging 1 34005 34394
NP_817842.1 NC_004684_p81 protein of an unannotated phage phrog_7394 unknown function unknown function -1 62890 63111
NP_817790.1 NC_004684_p29 protein of an unannotated phage phrog_934 tail length tape measure protein tail 1 21946 27594
NP_817769.1 NC_004684_p8 protein of an unannotated phage phrog_5935 unknown function unknown function -1 6038 6508
NP_817783.1 NC_004684_p22 protein of an unannotated phage phrog_7051 unknown function unknown function -1 18832 18945
NP_817765.1 NC_004684_p4 protein of an unannotated phage phrog_2389 QueD-like 6-pyruvoyl-tetrahydropterin synthase moron, auxiliary metabolic gene and host takeover 1 2647 3078
NP_817848.1 NC_004684_p87 protein of an unannotated phage phrog_7256 unknown function unknown function -1 65580 65912
NP_817838.1 NC_004684_p77 protein of an unannotated phage phrog_7479 unknown function unknown function -1 61542 61967
NP_817777.1 NC_004684_p16 protein of an unannotated phage phrog_779 unknown function unknown function 1 14649 15467
NP_817813.1 NC_004684_p52 protein of an unannotated phage phrog_3892 unknown function unknown function -1 46943 47278
NP_817833.1 NC_004684_p72 protein of an unannotated phage phrog_8177 unknown function unknown function -1 59880 60158
NP_817801.1 NC_004684_p40 protein of an unannotated phage phrog_941 unknown function unknown function 1 37851 38216
NP_817841.1 NC_004684_p80 protein of an unannotated phage phrog_6719 unknown function unknown function -1 62329 62823
NP_817816.1 NC_004684_p55 protein of an unannotated phage phrog_2526 unknown function unknown function -1 50641 50805
NP_817850.1 NC_004684_p89 protein of an unannotated phage phrog_6718 unknown function unknown function -1 66274 66465
NP_817822.1 NC_004684_p61 protein of an unannotated phage phrog_8754 unknown function unknown function 1 54609 54878
NP_817817.1 NC_004684_p56 protein of an unannotated phage phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 50808 52637
NP_817785.1 NC_004684_p24 protein of an unannotated phage phrog_783 head-tail adaptor connector 1 19415 20032
NP_817809.1 NC_004684_p48 protein of an unannotated phage phrog_870 unknown function unknown function -1 43076 43615
NP_817808.1 NC_004684_p47 protein of an unannotated phage phrog_526 holin lysis 1 42423 42959
NP_817829.1 NC_004684_p68 protein of an unannotated phage phrog_928 unknown function unknown function 1 57816 58529
NP_817771.1 NC_004684_p10 protein of an unannotated phage phrog_7710 unknown function unknown function 1 7163 7483
NP_817798.1 NC_004684_p37 protein of an unannotated phage phrog_282 unknown function unknown function 1 35594 36193
NP_817804.1 NC_004684_p43 protein of an unannotated phage phrog_597 DNA binding protein DNA, RNA and nucleotide metabolism -1 39351 39530
NP_817847.1 NC_004684_p86 protein of an unannotated phage phrog_8227 unknown function unknown function -1 65446 65583
NP_817810.1 NC_004684_p49 protein of an unannotated phage phrog_466 exonuclease DNA, RNA and nucleotide metabolism -1 43630 44997
NP_817787.1 NC_004684_p26 protein of an unannotated phage phrog_901 unknown function unknown function 1 20598 20951
NP_817764.1 NC_004684_p3 protein of an unannotated phage phrog_1550 QueC-like queuosine biosynthesis moron, auxiliary metabolic gene and host takeover 1 1943 2650
NP_817832.1 NC_004684_p71 protein of an unannotated phage phrog_7876 unknown function unknown function -1 59371 59865
NP_817799.1 NC_004684_p38 protein of an unannotated phage phrog_3329 unknown function unknown function 1 36190 37503
NP_817819.1 NC_004684_p58 protein of an unannotated phage phrog_993 unknown function unknown function -1 53011 53499
NP_817828.1 NC_004684_p67 protein of an unannotated phage phrog_7186 unknown function unknown function 1 57436 57819
NP_817773.1 NC_004684_p12 protein of an unannotated phage phrog_776 portal protein head and packaging 1 7845 9734
NP_817763.1 NC_004684_p2 protein of an unannotated phage phrog_7068 queuine tRNA-ribosyltransferase moron, auxiliary metabolic gene and host takeover 1 789 1946
NP_817812.1 NC_004684_p51 protein of an unannotated phage phrog_7912 unknown function unknown function -1 46780 46941
NP_817800.1 NC_004684_p39 protein of an unannotated phage phrog_915 unknown function unknown function 1 37534 37890
NP_817780.1 NC_004684_p19 protein of an unannotated phage phrog_2344 unknown function unknown function 1 16792 17274
NP_817844.1 NC_004684_p83 protein of an unannotated phage phrog_1221 unknown function unknown function -1 63828 64898
NP_817792.1 NC_004684_p31 protein of an unannotated phage phrog_837 minor tail protein tail 1 29042 30091
NP_817796.1 NC_004684_p35 protein of an unannotated phage phrog_948 unknown function unknown function 1 34403 34792
NP_817827.1 NC_004684_p66 protein of an unannotated phage phrog_1031 unknown function unknown function 1 56870 57394
NP_817788.1 NC_004684_p27 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 20951 21379
NP_817831.1 NC_004684_p70 protein of an unannotated phage phrog_2089 unknown function unknown function -1 59150 59374
NP_817775.1 NC_004684_p14 protein of an unannotated phage phrog_2069 unknown function unknown function 1 12181 12354
NP_817781.1 NC_004684_p20 protein of an unannotated phage phrog_2525 unknown function unknown function 1 17271 17603
NP_817823.1 NC_004684_p62 protein of an unannotated phage phrog_996 unknown function unknown function 1 54865 55566
NP_817851.1 NC_004684_p90 protein of an unannotated phage phrog_7435 unknown function unknown function -1 66561 67316
NP_817802.1 NC_004684_p41 protein of an unannotated phage phrog_892 tail fiber protein tail 1 38254 38658