functional categories (each PHROG annotation is associated to a category) | Notes | ||
head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
tail | lysis | other | - Scroll to zoom |
unknown function | - Click on a protein to see its PHROG |
Locus |
NC_004685 |
Definition |
Mycobacterium phage Corndog, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Corndogvirus. |
DB of origin |
REFSEQ |
Length |
69777 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
122 |
%GC |
65.38 |
Number of singletons |
6 |
Number of paralogs |
0 |
NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
---|---|---|---|---|---|---|---|---|
NP_817943.1 | NC_004685_p92 | protein of an unannotated phage | phrog_11147 | unknown function | unknown function | -1 | 56311 | 56760 |
NP_817852.1 | NC_004685_p1 | protein of an unannotated phage | phrog_4307 | unknown function | unknown function | -1 | 170 | 439 |
NP_817918.1 | NC_004685_p67 | protein of an unannotated phage | phrog_553 | minor tail protein | tail | 1 | 42385 | 43071 |
NP_817967.1 | NC_004685_p116 | protein of an unannotated phage | phrog_11387 | unknown function | unknown function | -1 | 66178 | 66357 |
NP_817905.1 | NC_004685_p54 | protein of an unannotated phage | phrog_621 | tail assembly chaperone | tail | 1 | 26207 | 26761 |
NP_817961.1 | NC_004685_p110 | protein of an unannotated phage | phrog_2164 | unknown function | unknown function | -1 | 64647 | 65213 |
NP_817862.1 | NC_004685_p11 | protein of an unannotated phage | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | -1 | 3308 | 3793 |
NP_817938.1 | NC_004685_p87 | protein of an unannotated phage | phrog_4873 | Ku-like DNA end binding | DNA, RNA and nucleotide metabolism | -1 | 52829 | 53683 |
NP_817913.1 | NC_004685_p62 | protein of an unannotated phage | phrog_382 | minor tail protein with lysin activity | tail | 1 | 39642 | 41132 |
NP_817935.1 | NC_004685_p84 | protein of an unannotated phage | phrog_947 | DNA polymerase processivity factor | DNA, RNA and nucleotide metabolism | -1 | 51112 | 52290 |
NP_817888.1 | NC_004685_p37 | protein of an unannotated phage | phrog_1721 | galactosyl transferase | moron, auxiliary metabolic gene and host takeover | 1 | 18218 | 18910 |
NP_817863.1 | NC_004685_p12 | protein of an unannotated phage | phrog_11799 | unknown function | unknown function | -1 | 3790 | 4524 |
NP_817903.1 | NC_004685_p52 | protein of an unannotated phage | phrog_11719 | unknown function | unknown function | -1 | 25493 | 25684 |
NP_817900.1 | NC_004685_p49 | protein of an unannotated phage | phrog_476 | major tail protein | tail | 1 | 24316 | 25131 |
NP_817902.1 | NC_004685_p51 | protein of an unannotated phage | phrog_2906 | unknown function | unknown function | -1 | 25320 | 25493 |
NP_817932.1 | NC_004685_p81 | protein of an unannotated phage | phrog_762 | unknown function | unknown function | -1 | 49097 | 49528 |
NP_817953.1 | NC_004685_p102 | protein of an unannotated phage | phrog_6351 | unknown function | unknown function | -1 | 62086 | 62493 |
NP_817869.1 | NC_004685_p18 | protein of an unannotated phage | phrog_10414 | unknown function | unknown function | 1 | 7098 | 7472 |
NP_817906.1 | NC_004685_p55 | protein of an unannotated phage | phrog_25273 | tail assembly chaperone | tail | 1 | 26715 | 27158 |
NP_817915.1 | NC_004685_p64 | protein of an unannotated phage | phrog_8501 | minor tail protein | tail | 1 | 41549 | 41950 |
NP_817928.1 | NC_004685_p77 | protein of an unannotated phage | phrog_5798 | unknown function | unknown function | -1 | 47954 | 48193 |
NP_817894.1 | NC_004685_p43 | protein of an unannotated phage | phrog_442 | head-tail adaptor | connector | 1 | 22037 | 22642 |
NP_817870.1 | NC_004685_p19 | protein of an unannotated phage | phrog_10983 | unknown function | unknown function | 1 | 7393 | 7776 |
NP_817879.1 | NC_004685_p28 | protein of an unannotated phage | phrog_1385 | unknown function | unknown function | 1 | 12146 | 12382 |
NP_817947.1 | NC_004685_p96 | protein of an unannotated phage | phrog_8638 | unknown function | unknown function | -1 | 58355 | 60055 |
NP_817942.1 | NC_004685_p91 | protein of an unannotated phage | phrog_10921 | unknown function | unknown function | -1 | 55929 | 56267 |
NP_817964.1 | NC_004685_p113 | protein of an unannotated phage | phrog_11863 | unknown function | unknown function | -1 | 65731 | 65886 |
NP_817890.1 | NC_004685_p39 | protein of an unannotated phage | phrog_80 | head maturation protease | head and packaging | 1 | 19596 | 20261 |
NP_817892.1 | NC_004685_p41 | protein of an unannotated phage | phrog_2263 | major head protein | head and packaging | 1 | 20547 | 21779 |
NP_817945.1 | NC_004685_p94 | protein of an unannotated phage | phrog_11085 | unknown function | unknown function | -1 | 57197 | 57457 |
NP_817853.1 | NC_004685_p2 | protein of an unannotated phage | phrog_10880 | unknown function | unknown function | -1 | 439 | 651 |
NP_817966.1 | NC_004685_p115 | protein of an unannotated phage | phrog_11514 | unknown function | unknown function | -1 | 65981 | 66181 |
NP_817882.1 | NC_004685_p31 | protein of an unannotated phage | phrog_1459 | terminase small subunit | head and packaging | 1 | 13270 | 13569 |
NP_817868.1 | NC_004685_p17 | protein of an unannotated phage | phrog_1911 | unknown function | unknown function | 1 | 6409 | 7074 |
NP_817965.1 | NC_004685_p114 | protein of an unannotated phage | phrog_10868 | unknown function | unknown function | -1 | 65883 | 65984 |
NP_817963.1 | NC_004685_p112 | protein of an unannotated phage | phrog_8253 | unknown function | unknown function | -1 | 65462 | 65734 |
NP_817917.1 | NC_004685_p66 | protein of an unannotated phage | phrog_1560 | unknown function | unknown function | 1 | 42197 | 42385 |
NP_817927.1 | NC_004685_p76 | protein of an unannotated phage | phrog_664 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 47488 | 47895 |
NP_817934.1 | NC_004685_p83 | protein of an unannotated phage | phrog_11268 | unknown function | unknown function | -1 | 50364 | 50996 |
NP_817930.1 | NC_004685_p79 | protein of an unannotated phage | phrog_20435 | unknown function | unknown function | -1 | 48625 | 48879 |
NP_817887.1 | NC_004685_p36 | protein of an unannotated phage | phrog_4447 | glycosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 17352 | 18221 |
NP_817916.1 | NC_004685_p65 | protein of an unannotated phage | phrog_8357 | unknown function | unknown function | 1 | 41960 | 42184 |
NP_817904.1 | NC_004685_p53 | protein of an unannotated phage | phrog_11503 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 25681 | 26136 |
NP_817858.1 | NC_004685_p7 | protein of an unannotated phage | phrog_363 | DNA methyltransferase | other | -1 | 1933 | 2523 |
NP_817910.1 | NC_004685_p59 | protein of an unannotated phage | phrog_110 | minor tail protein | tail | 1 | 34518 | 36254 |
NP_817973.1 | NC_004685_p122 | protein of an unannotated phage | phrog_11142 | unknown function | unknown function | 1 | 68942 | 69664 |
NP_817899.1 | NC_004685_p48 | protein of an unannotated phage | phrog_813 | head-tail adaptor | connector | 1 | 23835 | 24287 |
NP_817962.1 | NC_004685_p111 | protein of an unannotated phage | phrog_12168 | unknown function | unknown function | -1 | 65210 | 65458 |
NP_817939.1 | NC_004685_p88 | protein of an unannotated phage | phrog_12859 | unknown function | unknown function | -1 | 53737 | 53964 |
NP_817881.1 | NC_004685_p30 | protein of an unannotated phage | phrog_11114 | unknown function | unknown function | 1 | 12798 | 13268 |
NP_817872.1 | NC_004685_p21 | protein of an unannotated phage | phrog_11004 | unknown function | unknown function | 1 | 7997 | 8227 |
NP_817949.1 | NC_004685_p98 | protein of an unannotated phage | phrog_889 | unknown function | unknown function | -1 | 60820 | 61248 |
NP_817929.1 | NC_004685_p78 | protein of an unannotated phage | phrog_549 | unknown function | unknown function | -1 | 48190 | 48615 |
NP_817874.1 | NC_004685_p23 | protein of an unannotated phage | phrog_4656 | unknown function | unknown function | 1 | 10580 | 10780 |
NP_817951.1 | NC_004685_p100 | protein of an unannotated phage | phrog_11545 | unknown function | unknown function | -1 | 61585 | 61767 |
NP_817908.1 | NC_004685_p57 | protein of an unannotated phage | phrog_2337 | tail length tape measure protein | tail | 1 | 28380 | 32765 |
NP_817911.1 | NC_004685_p60 | protein of an unannotated phage | phrog_732 | minor tail protein | tail | 1 | 36294 | 37142 |
NP_817866.1 | NC_004685_p15 | protein of an unannotated phage | phrog_1674 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 5422 | 6171 |
NP_817923.1 | NC_004685_p72 | protein of an unannotated phage | phrog_3888 | unknown function | unknown function | 1 | 45808 | 46107 |
NP_817856.1 | NC_004685_p5 | protein of an unannotated phage | phrog_6910 | unknown function | unknown function | -1 | 1111 | 1581 |
NP_817946.1 | NC_004685_p95 | protein of an unannotated phage | phrog_11021 | unknown function | unknown function | -1 | 57466 | 58266 |
NP_817861.1 | NC_004685_p10 | protein of an unannotated phage | phrog_18603 | unknown function | unknown function | -1 | 3042 | 3305 |
NP_817955.1 | NC_004685_p104 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 62940 | 63107 |
NP_817880.1 | NC_004685_p29 | protein of an unannotated phage | phrog_338 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 12449 | 12778 |
NP_817968.1 | NC_004685_p117 | protein of an unannotated phage | phrog_11310 | unknown function | unknown function | -1 | 66360 | 66803 |
NP_817933.1 | NC_004685_p82 | protein of an unannotated phage | phrog_4776 | unknown function | unknown function | -1 | 49596 | 50321 |
NP_817875.1 | NC_004685_p24 | protein of an unannotated phage | phrog_5892 | unknown function | unknown function | 1 | 10777 | 10983 |
NP_817884.1 | NC_004685_p33 | protein of an unannotated phage | phrog_826 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 15066 | 15548 |
NP_817926.1 | NC_004685_p75 | protein of an unannotated phage | phrog_11086 | unknown function | unknown function | 1 | 47079 | 47519 |
NP_817921.1 | NC_004685_p70 | protein of an unannotated phage | phrog_102 | endolysin | lysis | 1 | 44462 | 45502 |
NP_817970.1 | NC_004685_p119 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 67101 | 67505 |
NP_817893.1 | NC_004685_p42 | protein of an unannotated phage | phrog_11246 | unknown function | unknown function | 1 | 21779 | 22027 |
NP_817936.1 | NC_004685_p85 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 52318 | 52539 |
NP_817920.1 | NC_004685_p69 | protein of an unannotated phage | phrog_700 | endolysin | lysis | 1 | 43240 | 44460 |
NP_817871.1 | NC_004685_p20 | protein of an unannotated phage | phrog_11308 | unknown function | unknown function | 1 | 7773 | 8000 |
NP_817876.1 | NC_004685_p25 | protein of an unannotated phage | phrog_1900 | mobile element MPME | moron, auxiliary metabolic gene and host takeover | 1 | 11029 | 11334 |
NP_817886.1 | NC_004685_p35 | protein of an unannotated phage | phrog_6608 | methyltransferase | other | 1 | 16775 | 17359 |
NP_817924.1 | NC_004685_p73 | protein of an unannotated phage | phrog_11815 | unknown function | unknown function | 1 | 46118 | 46594 |
NP_817867.1 | NC_004685_p16 | protein of an unannotated phage | phrog_11773 | unknown function | unknown function | 1 | 6171 | 6326 |
NP_817909.1 | NC_004685_p58 | protein of an unannotated phage | phrog_106 | minor tail protein | tail | 1 | 32770 | 34521 |
NP_817944.1 | NC_004685_p93 | protein of an unannotated phage | phrog_11784 | unknown function | unknown function | -1 | 56866 | 57207 |
NP_817937.1 | NC_004685_p86 | protein of an unannotated phage | phrog_11365 | unknown function | unknown function | -1 | 52540 | 52812 |
NP_817873.1 | NC_004685_p22 | protein of an unannotated phage | phrog_11515 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 8227 | 10587 |
NP_817922.1 | NC_004685_p71 | protein of an unannotated phage | phrog_11087 | holin | lysis | 1 | 45515 | 45811 |
NP_817885.1 | NC_004685_p34 | protein of an unannotated phage | phrog_12 | portal protein | head and packaging | 1 | 15549 | 16778 |
NP_817864.1 | NC_004685_p13 | protein of an unannotated phage | phrog_1956 | unknown function | unknown function | 1 | 5024 | 5311 |
NP_817891.1 | NC_004685_p40 | protein of an unannotated phage | phrog_5492 | unknown function | unknown function | 1 | 20258 | 20395 |
NP_817914.1 | NC_004685_p63 | protein of an unannotated phage | phrog_644 | unknown function | unknown function | 1 | 41144 | 41545 |
NP_817940.1 | NC_004685_p89 | protein of an unannotated phage | phrog_13372 | unknown function | unknown function | -1 | 53972 | 54247 |
NP_817958.1 | NC_004685_p107 | protein of an unannotated phage | phrog_11340 | unknown function | unknown function | -1 | 63815 | 64147 |
NP_817898.1 | NC_004685_p47 | protein of an unannotated phage | phrog_2325 | minor tail protein | tail | 1 | 23417 | 23842 |
NP_817897.1 | NC_004685_p46 | protein of an unannotated phage | phrog_11597 | unknown function | unknown function | 1 | 23152 | 23472 |
NP_817907.1 | NC_004685_p56 | protein of an unannotated phage | phrog_3593 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 27158 | 27757 |
NP_817956.1 | NC_004685_p105 | protein of an unannotated phage | phrog_3207 | unknown function | unknown function | -1 | 63246 | 63515 |
NP_817919.1 | NC_004685_p68 | protein of an unannotated phage | phrog_12052 | unknown function | unknown function | 1 | 43071 | 43190 |
NP_817901.1 | NC_004685_p50 | protein of an unannotated phage | phrog_14205 | unknown function | unknown function | -1 | 25228 | 25338 |
NP_817896.1 | NC_004685_p45 | protein of an unannotated phage | phrog_1531 | head closure | connector | 1 | 22796 | 23155 |
NP_817971.1 | NC_004685_p120 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 67517 | 68122 |
NP_817954.1 | NC_004685_p103 | protein of an unannotated phage | phrog_11675 | unknown function | unknown function | -1 | 62493 | 62897 |
NP_817854.1 | NC_004685_p3 | protein of an unannotated phage | phrog_11270 | unknown function | unknown function | -1 | 651 | 968 |
NP_817878.1 | NC_004685_p27 | protein of an unannotated phage | phrog_1186 | unknown function | unknown function | 1 | 11715 | 12149 |
NP_817925.1 | NC_004685_p74 | protein of an unannotated phage | phrog_5552 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 46585 | 47082 |
NP_817960.1 | NC_004685_p109 | protein of an unannotated phage | phrog_11392 | unknown function | unknown function | -1 | 64439 | 64660 |
NP_817931.1 | NC_004685_p80 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 48872 | 49051 |
NP_817948.1 | NC_004685_p97 | protein of an unannotated phage | phrog_2939 | unknown function | unknown function | -1 | 60185 | 60487 |
NP_817877.1 | NC_004685_p26 | protein of an unannotated phage | phrog_11069 | transcriptional regulator WhiB-like | transcription regulation | -1 | 11362 | 11670 |
NP_817889.1 | NC_004685_p38 | protein of an unannotated phage | phrog_854 | glucosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 18907 | 19527 |
NP_817895.1 | NC_004685_p44 | protein of an unannotated phage | phrog_11160 | unknown function | unknown function | 1 | 22656 | 22793 |
NP_817941.1 | NC_004685_p90 | protein of an unannotated phage | phrog_6218 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | -1 | 54424 | 55932 |
NP_817857.1 | NC_004685_p6 | protein of an unannotated phage | phrog_1008 | DNA methyltransferase | other | -1 | 1578 | 2141 |
NP_817972.1 | NC_004685_p121 | protein of an unannotated phage | phrog_13622 | unknown function | unknown function | -1 | 68067 | 68705 |
NP_817865.1 | NC_004685_p14 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 5304 | 5429 |
NP_817859.1 | NC_004685_p8 | protein of an unannotated phage | phrog_11562 | unknown function | unknown function | -1 | 2520 | 2714 |
NP_817952.1 | NC_004685_p101 | protein of an unannotated phage | phrog_11120 | unknown function | unknown function | -1 | 61760 | 62089 |
NP_817855.1 | NC_004685_p4 | protein of an unannotated phage | phrog_10119 | unknown function | unknown function | -1 | 971 | 1111 |
NP_817883.1 | NC_004685_p32 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 13529 | 15040 |
NP_817957.1 | NC_004685_p106 | protein of an unannotated phage | phrog_13095 | unknown function | unknown function | -1 | 63603 | 63818 |
NP_817860.1 | NC_004685_p9 | protein of an unannotated phage | phrog_6074 | unknown function | unknown function | -1 | 2707 | 3042 |
NP_817950.1 | NC_004685_p99 | protein of an unannotated phage | phrog_11313 | unknown function | unknown function | -1 | 61298 | 61588 |
NP_817912.1 | NC_004685_p61 | protein of an unannotated phage | phrog_346 | minor tail protein | tail | 1 | 37139 | 39649 |
NP_817959.1 | NC_004685_p108 | protein of an unannotated phage | phrog_11047 | unknown function | unknown function | -1 | 64188 | 64442 |
NP_817969.1 | NC_004685_p118 | protein of an unannotated phage | phrog_11204 | unknown function | unknown function | -1 | 66817 | 67104 |