Genomic map of Yersinia phage L-413C (NC_004745)

functional categories (each PHROG annotation is associated to a category)             Notes   
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG

More about this genome

Yersinia phage L-413C, complete genome.
Molecule type
Genome structure
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Peduovirinae; Peduovirus.
DB of origin
Host Name
Yersinia pestis
Host domain
Is prophage?
Number of proteins
Number of singletons
Number of paralogs

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_839851.1 NC_004745_p2 terminase ATPase subunit phrog_2 terminase large subunit head and packaging -1 1223 2995
NP_839857.1 NC_004745_p8 hypothetical protein phrog_175 holin lysis 1 6718 6999
NP_839850.1 NC_004745_p1 portal vertex protein phrog_68 portal protein head and packaging -1 189 1223
NP_839880.1 NC_004745_p31 Cox phrog_272 Cox-like excisionase and repressor integration and excision 1 24807 25094
NP_839852.1 NC_004745_p3 capsid-scaffolding protein phrog_73 head scaffolding protein head and packaging 1 3169 4023
NP_839885.1 NC_004745_p36 DksA-like zinc finger domain containing protein phrog_54 DksA-like zinc-finger protein other 1 26354 26578
NP_839864.1 NC_004745_p15 baseplate wedge subunit phrog_43 baseplate wedge subunit tail 1 10068 10415
NP_839854.1 NC_004745_p5 terminase endonuclease subunit phrog_74 terminase small subunit head and packaging 1 5159 5902
NP_839881.1 NC_004745_p32 hypothetical protein phrog_273 unknown function unknown function 1 25097 25267
NP_839871.1 NC_004745_p22 major tail tube protein phrog_55 head closure connector 1 17669 18187
NP_839889.1 NC_004745_p40 hypothetical protein phrog_3694 unknown function unknown function -1 29530 30522
NP_839869.1 NC_004745_p20 hypothetical protein phrog_7729 unknown function unknown function -1 15286 16065
NP_839875.1 NC_004745_p26 hypothetical protein phrog_76 tail protein tail 1 21127 21606
NP_839876.1 NC_004745_p27 tail protein phrog_52 tail protein tail 1 21606 22769
NP_839877.1 NC_004745_p28 Ogr phrog_603 transcriptional regulator transcription regulation 1 22769 23068
NP_839868.1 NC_004745_p19 hypothetical protein phrog_136 tail fiber assembly protein tail 1 14607 15134
NP_839862.1 NC_004745_p13 hypothetical protein phrog_26 tail completion or Neck1 protein connector 1 8917 9369
NP_839872.1 NC_004745_p23 gpE+E' phrog_103 tail protein tail 1 18245 18672
NP_839861.1 NC_004745_p12 hypothetical protein phrog_65 tail terminator connector 1 8457 8924
NP_839870.1 NC_004745_p21 major tail sheath protein phrog_23 tail sheath tail 1 16466 17656
NP_839879.1 NC_004745_p30 hypothetical protein phrog_147 transcriptional regulator transcription regulation -1 24392 24685
NP_839863.1 NC_004745_p14 hypothetical protein phrog_11 baseplate spike tail 1 9436 10071
NP_839855.1 NC_004745_p6 hypothetical protein phrog_71 head-tail adaptor Ad1 connector 1 6002 6511
NP_839874.1 NC_004745_p25 hypothetical protein phrog_28 tail length tape measure protein tail 1 18665 21112
NP_839888.1 NC_004745_p39 hypothetical protein phrog_1812 unknown function unknown function 1 29122 29574
NP_839882.1 NC_004745_p33 hypothetical protein phrog_235 unknown function unknown function 1 25264 25764
NP_839866.1 NC_004745_p17 hypothetical protein phrog_48 tail protein tail 1 11321 11851
NP_839860.1 NC_004745_p11 LysB phrog_89 Rz-like spanin lysis 1 7924 8349
NP_839859.1 NC_004745_p10 LysA phrog_162 endolysin lysis 1 7511 7936
NP_839878.1 NC_004745_p29 integrase phrog_1 integrase integration and excision -1 23342 24322
NP_839856.1 NC_004745_p7 hypothetical protein phrog_46 baseplate hub tail 1 6511 6714
NP_839886.1 NC_004745_p37 hypothetical protein phrog_154 replication initiation protein DNA, RNA and nucleotide metabolism 1 26575 26850
NP_839883.1 NC_004745_p34 hypothetical protein phrog_128 unknown function unknown function 1 25828 26052
NP_839887.1 NC_004745_p38 hypothetical protein phrog_91 nicking at origin of replication DNA, RNA and nucleotide metabolism 1 26840 29125
NP_839867.1 NC_004745_p18 hypothetical protein phrog_381 tail fiber protein tail 1 11862 14603
NP_839873.1 NC_004745_p24 hypothetical protein phrog_103 tail protein tail 1 18245 18520
NP_839853.1 NC_004745_p4 capsid protein phrog_70 major head protein head and packaging 1 4082 5155
NP_839858.1 NC_004745_p9 hypothetical protein phrog_90 endolysin lysis 1 6999 7496
NP_839884.1 NC_004745_p35 hypothetical protein phrog_265 replication initiation protein DNA, RNA and nucleotide metabolism 1 26052 26351
NP_839865.1 NC_004745_p16 baseplate assembly protein phrog_6 baseplate wedge subunit tail 1 10420 11328