Genomic map of Streptococcus phage C1 (NC_004814)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004814
Definition
Streptococcus phage C1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Caudovirales; Podoviridae; Picovirinae; Rosenblumvirus.
DB of origin
REFSEQ
Length
16687
Host Name
Streptococcus sp.
Host domain
Bacteria
Is prophage?
undef
Number of proteins
20
%GC
34.62
Number of singletons
11
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_852011.1 NC_004814_p5 hypothetical protein singleton unknown function unknown function 1 2927 3550
NP_852020.1 NC_004814_p14 lower collar protein phrog_3225 adaptor Ad4 connector -1 12660 13370
NP_852017.2 NC_004814_p11 PlyCA phrog_5979 unknown function unknown function 1 8045 9442
NP_852024.1 NC_004814_p18 hypothetical protein singleton unknown function unknown function -1 15743 15913
NP_852023.1 NC_004814_p17 hypothetical protein singleton unknown function unknown function -1 15583 15738
NP_852022.1 NC_004814_p16 major capsid protein phrog_2006 major head protein head and packaging -1 14367 15545
NP_852025.1 NC_004814_p19 hypothetical protein singleton unknown function unknown function -1 16102 16296
NP_852009.1 NC_004814_p3 hypothetical protein singleton unknown function unknown function 1 1934 2470
NP_852008.1 NC_004814_p2 phage protien singleton unknown function unknown function 1 1746 1934
NP_852016.1 NC_004814_p10 lil phrog_959 HNH endonuclease DNA, RNA and nucleotide metabolism 1 7735 8052
NP_852012.1 NC_004814_p6 encapsidation protein phrog_2150 terminase head and packaging 1 3550 4776
NP_852019.1 NC_004814_p13 hypothetical protein singleton unknown function unknown function -1 11381 12673
NP_852007.1 NC_004814_p1 hypothetical protein singleton unknown function unknown function 1 572 1093
NP_852014.1 NC_004814_p8 holin phrog_199 holin lysis 1 7204 7530
NP_852021.1 NC_004814_p15 upper collar protein phrog_2038 upper collar connector connector -1 13367 14320
NP_852026.1 NC_004814_p20 hypothetical protein singleton unknown function unknown function -1 16380 16547
NP_852013.1 NC_004814_p7 DNA polymerase phrog_1907 DNA polymerase DNA, RNA and nucleotide metabolism 1 4806 7160
NP_852010.1 NC_004814_p4 hypothetical protein singleton unknown function unknown function 1 2601 2918
NP_852015.1 NC_004814_p9 PlyCB singleton unknown function unknown function 1 7517 7735
NP_852018.1 NC_004814_p12 tail protein phrog_2248 tail protein tail -1 9471 11195