| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_004820 |
Definition |
Bacillus prophage phBC6A51, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
61395 |
Host Name |
Bacillus cereus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
75 |
%GC |
37.68 |
Number of singletons |
6 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_852551.1 | NC_004820_p71 | hypothetical protein | phrog_4616 | unknown function | unknown function | 1 | 56575 | 56877 |
| NP_852489.1 | NC_004820_p9 | Chromosome segregation ATPases | phrog_15167 | ATPase | other | 1 | 5816 | 6451 |
| NP_852515.1 | NC_004820_p35 | hypothetical protein | phrog_5765 | unknown function | unknown function | 1 | 25758 | 25904 |
| NP_852481.1 | NC_004820_p1 | Transcriptional regulator, MerR family | phrog_8 | transcriptional regulator | transcription regulation | -1 | 119 | 463 |
| NP_852550.1 | NC_004820_p70 | hypothetical protein | phrog_4616 | unknown function | unknown function | 1 | 56309 | 56578 |
| NP_852484.1 | NC_004820_p4 | Transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | -1 | 2463 | 2801 |
| NP_852490.1 | NC_004820_p10 | hypothetical protein | phrog_23683 | unknown function | unknown function | 1 | 6468 | 6845 |
| NP_852498.1 | NC_004820_p18 | DNA polymerase I | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 15181 | 17589 |
| NP_852491.1 | NC_004820_p11 | Exonuclease SbcD | phrog_100 | SbcD-like subunit of palindrome specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 6891 | 7874 |
| NP_852539.1 | NC_004820_p59 | hypothetical protein | phrog_20654 | unknown function | unknown function | 1 | 39730 | 40023 |
| NP_852552.1 | NC_004820_p72 | hypothetical protein | phrog_5703 | unknown function | unknown function | 1 | 56874 | 57056 |
| NP_852527.1 | NC_004820_p47 | Scaffold protein | phrog_2303 | head scaffolding protein | head and packaging | 1 | 33570 | 34343 |
| NP_852533.1 | NC_004820_p53 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 37360 | 37719 |
| NP_852549.1 | NC_004820_p69 | Transcriptional regulator, PBSX family | phrog_3 | transcriptional repressor | transcription regulation | -1 | 55923 | 56123 |
| NP_852524.1 | NC_004820_p44 | hypothetical protein | phrog_7344 | terminase small subunit | head and packaging | 1 | 29769 | 30236 |
| NP_852508.1 | NC_004820_p28 | hypothetical protein | phrog_2044 | RNA polymerase beta subunit | DNA, RNA and nucleotide metabolism | 1 | 22377 | 22607 |
| NP_852494.1 | NC_004820_p14 | hypothetical protein | phrog_843 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 8727 | 9245 |
| NP_852511.1 | NC_004820_p31 | hypothetical protein | singleton | unknown function | unknown function | 1 | 23642 | 24286 |
| NP_852547.1 | NC_004820_p67 | hypothetical protein | phrog_10121 | unknown function | unknown function | -1 | 54340 | 54666 |
| NP_852535.1 | NC_004820_p55 | hypothetical protein | phrog_1407 | major tail protein | tail | 1 | 38143 | 38649 |
| NP_852496.1 | NC_004820_p16 | hypothetical protein | phrog_17870 | unknown function | unknown function | 1 | 11248 | 12033 |
| NP_852501.1 | NC_004820_p21 | hypothetical protein | phrog_23406 | unknown function | unknown function | 1 | 18492 | 18794 |
| NP_852513.1 | NC_004820_p33 | Transglycosylase | phrog_1315 | unknown function | unknown function | 1 | 24480 | 24797 |
| NP_852521.1 | NC_004820_p41 | hypothetical protein | phrog_33579 | unknown function | unknown function | 1 | 27565 | 28092 |
| NP_852507.1 | NC_004820_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22086 | 22331 |
| NP_852531.1 | NC_004820_p51 | hypothetical protein | phrog_115 | minor head protein | head and packaging | 1 | 36176 | 36982 |
| NP_852486.1 | NC_004820_p6 | Exonuclease SbcC | phrog_16465 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 3697 | 5253 |
| NP_852518.1 | NC_004820_p38 | Transcription state regulatory protein abrB | phrog_4681 | antitoxin from a toxin-antitoxin system | moron, auxiliary metabolic gene and host takeover | 1 | 26629 | 26910 |
| NP_852487.1 | NC_004820_p7 | hypothetical protein | phrog_24690 | unknown function | unknown function | 1 | 5267 | 5569 |
| NP_852514.1 | NC_004820_p34 | hypothetical protein | phrog_32557 | unknown function | unknown function | 1 | 24814 | 25755 |
| NP_852529.1 | NC_004820_p49 | hypothetical protein | phrog_18880 | unknown function | unknown function | 1 | 35577 | 35801 |
| NP_852536.1 | NC_004820_p56 | hypothetical protein | phrog_8488 | unknown function | unknown function | 1 | 38673 | 39032 |
| NP_852541.1 | NC_004820_p61 | hypothetical protein | phrog_12552 | tail protein | tail | 1 | 44950 | 45468 |
| NP_852555.1 | NC_004820_p75 | Site-specific recombinase | phrog_95 | integrase | integration and excision | 1 | 59895 | 61367 |
| NP_852497.1 | NC_004820_p17 | MCM domain family protein | phrog_18685 | unknown function | unknown function | 1 | 12053 | 15139 |
| NP_852523.1 | NC_004820_p43 | hypothetical protein | phrog_23784 | unknown function | unknown function | 1 | 28714 | 29094 |
| NP_852485.1 | NC_004820_p5 | Transcriptional regulator | singleton | unknown function | unknown function | 1 | 2974 | 3291 |
| NP_852522.1 | NC_004820_p42 | hypothetical protein | phrog_31064 | unknown function | unknown function | 1 | 28129 | 28458 |
| NP_852493.1 | NC_004820_p13 | hypothetical protein | phrog_18033 | unknown function | unknown function | 1 | 8148 | 8717 |
| NP_852526.1 | NC_004820_p46 | hypothetical protein | phrog_64 | portal protein | head and packaging | 1 | 31985 | 33502 |
| NP_852505.1 | NC_004820_p25 | hypothetical protein | phrog_98 | unknown function | unknown function | 1 | 20983 | 21384 |
| NP_852540.1 | NC_004820_p60 | hypothetical protein | phrog_58 | tail length tape measure protein | tail | 1 | 40309 | 43956 |
| NP_852509.1 | NC_004820_p29 | hypothetical protein | phrog_1891 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 22610 | 23197 |
| NP_852538.1 | NC_004820_p58 | hypothetical protein | phrog_183 | tail chaperone protein | tail | 1 | 39302 | 39679 |
| NP_852525.1 | NC_004820_p45 | hypothetical protein | phrog_38 | terminase large subunit | head and packaging | 1 | 30253 | 31968 |
| NP_852504.1 | NC_004820_p24 | hypothetical protein | phrog_29245 | unknown function | unknown function | 1 | 20336 | 20590 |
| NP_852516.1 | NC_004820_p36 | hypothetical protein | phrog_18708 | unknown function | unknown function | 1 | 26030 | 26227 |
| NP_852530.1 | NC_004820_p50 | hypothetical protein | phrog_20081 | unknown function | unknown function | 1 | 35836 | 36171 |
| NP_852492.1 | NC_004820_p12 | hypothetical protein | phrog_16958 | unknown function | unknown function | 1 | 7871 | 8173 |
| NP_852488.1 | NC_004820_p8 | hypothetical Cytosolic Protein | phrog_18563 | unknown function | unknown function | 1 | 5569 | 5802 |
| NP_852542.1 | NC_004820_p62 | hypothetical protein | phrog_1775 | minor head protein | head and packaging | 1 | 45465 | 50441 |
| NP_852546.1 | NC_004820_p66 | hypothetical protein | phrog_2695 | unknown function | unknown function | -1 | 52651 | 54267 |
| NP_852503.1 | NC_004820_p23 | hypothetical protein | phrog_323 | transcriptional regulator, D5-like | transcription regulation | 1 | 19346 | 20122 |
| NP_852532.1 | NC_004820_p52 | hypothetical protein | phrog_15248 | unknown function | unknown function | 1 | 36986 | 37360 |
| NP_852499.1 | NC_004820_p19 | hypothetical protein | phrog_23763 | unknown function | unknown function | 1 | 17828 | 18085 |
| NP_852537.1 | NC_004820_p57 | hypothetical protein | phrog_2395 | unknown function | unknown function | 1 | 39019 | 39234 |
| NP_852506.1 | NC_004820_p26 | hypothetical protein | phrog_8017 | unknown function | unknown function | 1 | 21551 | 21859 |
| NP_852483.1 | NC_004820_p3 | hypothetical protein | phrog_19674 | unknown function | unknown function | 1 | 2267 | 2440 |
| NP_852500.1 | NC_004820_p20 | hypothetical protein | phrog_24365 | unknown function | unknown function | 1 | 18164 | 18475 |
| NP_852543.1 | NC_004820_p63 | XpaF1 protein | phrog_1193 | hemolysin | other | 1 | 50533 | 50769 |
| NP_852545.1 | NC_004820_p65 | N-acetylmuramoyl-L-alanine amidase | phrog_2338 | endolysin | lysis | 1 | 51005 | 52069 |
| NP_852520.1 | NC_004820_p40 | hypothetical protein | phrog_37014 | unknown function | unknown function | 1 | 27136 | 27303 |
| NP_852548.1 | NC_004820_p68 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 54743 | 54982 |
| NP_852554.1 | NC_004820_p74 | hypothetical protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 58297 | 58920 |
| NP_852528.1 | NC_004820_p48 | hypothetical protein | phrog_1328 | major head protein | head and packaging | 1 | 34403 | 35527 |
| NP_852534.1 | NC_004820_p54 | hypothetical protein | phrog_17565 | unknown function | unknown function | 1 | 37722 | 38129 |
| NP_852544.1 | NC_004820_p64 | holin | phrog_1299 | holin | lysis | 1 | 50769 | 51008 |
| NP_852510.1 | NC_004820_p30 | hypothetical protein | phrog_22662 | unknown function | unknown function | 1 | 23230 | 23655 |
| NP_852553.1 | NC_004820_p73 | hypothetical protein | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 57561 | 58355 |
| NP_852519.1 | NC_004820_p39 | hypothetical protein | phrog_26408 | unknown function | unknown function | 1 | 26912 | 27109 |
| NP_852482.1 | NC_004820_p2 | Prophage helix-turn-helix protein | phrog_1728 | transcriptional regulator | transcription regulation | 1 | 898 | 1995 |
| NP_852502.1 | NC_004820_p22 | hypothetical protein | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 18791 | 19126 |
| NP_852517.1 | NC_004820_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26252 | 26632 |
| NP_852512.1 | NC_004820_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 24301 | 24483 |
| NP_852495.1 | NC_004820_p15 | DNA/RNA helicase (DEAD/DEAH box family) | singleton | unknown function | unknown function | 1 | 9227 | 10420 |