| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_004821 |
Definition |
Bacillus prophage phBC6A52, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
38472 |
Host Name |
Bacillus cereus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
34.72 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_852568.1 | NC_004821_p12 | replication protein | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 8465 | 9211 |
| NP_852566.1 | NC_004821_p10 | hypothetical protein | phrog_11686 | unknown function | unknown function | 1 | 8090 | 8254 |
| NP_852562.1 | NC_004821_p6 | helix-turn-helix protein | phrog_1728 | transcriptional regulator | transcription regulation | 1 | 5127 | 6335 |
| NP_852572.1 | NC_004821_p16 | hypothetical protein | phrog_2521 | unknown function | unknown function | 1 | 10449 | 10703 |
| NP_852575.1 | NC_004821_p19 | Collagen triple helix repeat protein | phrog_30509 | collagen like minor tail | tail | -1 | 13455 | 14159 |
| NP_852578.1 | NC_004821_p22 | hypothetical protein | phrog_3928 | unknown function | unknown function | 1 | 16080 | 16250 |
| NP_852589.1 | NC_004821_p33 | hypothetical protein | phrog_37821 | unknown function | unknown function | 1 | 23133 | 23639 |
| NP_852580.1 | NC_004821_p24 | DNA integration/recombination/invertion protein | phrog_216 | integrase | integration and excision | 1 | 16760 | 17302 |
| NP_852564.1 | NC_004821_p8 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | 1 | 7312 | 7608 |
| NP_852557.1 | NC_004821_p1 | hypothetical protein | phrog_18551 | unknown function | unknown function | 1 | 394 | 657 |
| NP_852587.1 | NC_004821_p31 | Terminase small subunit | phrog_361 | terminase small subunit | head and packaging | 1 | 20914 | 21345 |
| NP_852560.1 | NC_004821_p4 | hypothetical protein | phrog_20953 | unknown function | unknown function | 1 | 2630 | 3331 |
| NP_852586.1 | NC_004821_p30 | endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 20443 | 20835 |
| NP_852570.1 | NC_004821_p14 | hypothetical protein | phrog_3407 | unknown function | unknown function | 1 | 10041 | 10235 |
| NP_852561.1 | NC_004821_p5 | DNA integration/recombination/invertion protein | phrog_1 | integrase | integration and excision | -1 | 3370 | 4479 |
| NP_852581.1 | NC_004821_p25 | hypothetical protein | phrog_19740 | unknown function | unknown function | 1 | 17600 | 17944 |
| NP_852563.1 | NC_004821_p7 | Transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | -1 | 6778 | 7128 |
| NP_852588.1 | NC_004821_p32 | Terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 21342 | 23066 |
| NP_852599.1 | NC_004821_p43 | hypothetical protein | phrog_58 | tail length tape measure protein | tail | 1 | 29274 | 32798 |
| NP_852597.1 | NC_004821_p41 | hypothetical protein | phrog_11502 | tail protein | tail | 1 | 27997 | 28632 |
| NP_852602.1 | NC_004821_p46 | hypothetical protein | phrog_17524 | tail protein | tail | 1 | 35061 | 35831 |
| NP_852605.1 | NC_004821_p49 | N-acetylmuramoyl-L-alanine amidase | phrog_291 | endolysin | lysis | 1 | 37597 | 38415 |
| NP_852582.1 | NC_004821_p26 | hypothetical protein | phrog_8726 | unknown function | unknown function | 1 | 18247 | 18465 |
| NP_852585.1 | NC_004821_p29 | hypothetical protein | phrog_3281 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 20159 | 20446 |
| NP_852584.1 | NC_004821_p28 | Cytosolic Protein | singleton | unknown function | unknown function | 1 | 19438 | 20076 |
| NP_852598.1 | NC_004821_p42 | hypothetical protein | phrog_4888 | tail assembly chaperone | tail | 1 | 28644 | 29030 |
| NP_852559.1 | NC_004821_p3 | hypothetical protein | phrog_18822 | unknown function | unknown function | 1 | 1833 | 2318 |
| NP_852590.1 | NC_004821_p34 | Portal protein | phrog_12 | portal protein | head and packaging | 1 | 23656 | 24840 |
| NP_852604.1 | NC_004821_p48 | holin | phrog_199 | holin | lysis | 1 | 37172 | 37597 |
| NP_852571.1 | NC_004821_p15 | hypothetical protein | phrog_4556 | unknown function | unknown function | 1 | 10261 | 10434 |
| NP_852600.1 | NC_004821_p44 | Gp13 protein | phrog_33 | distal tail protein Dit | tail | 1 | 32799 | 33482 |
| NP_852591.1 | NC_004821_p35 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 24803 | 25411 |
| NP_852593.1 | NC_004821_p37 | hypothetical protein | phrog_4609 | unknown function | unknown function | 1 | 26719 | 26979 |
| NP_852603.1 | NC_004821_p47 | hypothetical protein | phrog_3639 | minor tail protein | tail | 1 | 35956 | 37122 |
| NP_852577.1 | NC_004821_p21 | hypothetical protein | phrog_33846 | unknown function | unknown function | 1 | 15793 | 15981 |
| NP_852579.1 | NC_004821_p23 | hypothetical protein | phrog_248 | transcriptional activator | transcription regulation | 1 | 16278 | 16760 |
| NP_852574.1 | NC_004821_p18 | Collagen triple helix repeat protein | phrog_5073 | tail fiber protein | tail | -1 | 11112 | 12722 |
| NP_852558.1 | NC_004821_p2 | hypothetical protein | phrog_31552 | unknown function | unknown function | 1 | 1013 | 1339 |
| NP_852594.1 | NC_004821_p38 | hypothetical protein | phrog_4014 | head-tail adaptor | connector | 1 | 26954 | 27289 |
| NP_852592.1 | NC_004821_p36 | prohead protease | phrog_10 | major head protein | head and packaging | 1 | 25413 | 26717 |
| NP_852595.1 | NC_004821_p39 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 27279 | 27608 |
| NP_852565.1 | NC_004821_p9 | hypothetical protein | phrog_7338 | unknown function | unknown function | 1 | 7824 | 8090 |
| NP_852569.1 | NC_004821_p13 | hypothetical protein | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 9150 | 10025 |
| NP_852573.1 | NC_004821_p17 | hypothetical protein | phrog_7384 | unknown function | unknown function | 1 | 10718 | 10930 |
| NP_852583.1 | NC_004821_p27 | hypothetical protein | phrog_20555 | unknown function | unknown function | 1 | 18916 | 19311 |
| NP_852601.1 | NC_004821_p45 | endopeptidase | phrog_1067 | minor head protein | head and packaging | 1 | 33479 | 34990 |
| NP_852596.1 | NC_004821_p40 | hypothetical protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 27608 | 27985 |
| NP_852576.1 | NC_004821_p20 | hypothetical protein | phrog_8028 | unknown function | unknown function | -1 | 15358 | 15522 |
| NP_852567.1 | NC_004821_p11 | hypothetical protein | phrog_3674 | unknown function | unknown function | 1 | 8284 | 8460 |