Genomic map of Escherichia Stx1 converting phage (NC_004913)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004913
Definition
Stx1 converting phage DNA, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus; unclassified Traversvirus.
DB of origin
REFSEQ
Length
59866
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
167
%GC
49.69
Number of singletons
5
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_859150.1 NC_004913_p72 hypothetical protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover -1 28446 28658
NP_859180.1 NC_004913_p102 hypothetical protein phrog_18463 unknown function unknown function 1 37516 37842
NP_859123.1 NC_004913_p45 hypothetical protein phrog_25638 unknown function unknown function -1 16995 17501
NP_859090.1 NC_004913_p12 hypothetical protein phrog_486 virion structural protein head and packaging 1 5857 6246
NP_859236.1 NC_004913_p158 Ant protein phrog_524 anti-repressor Ant transcription regulation 1 56707 57276
NP_859133.1 NC_004913_p55 hypothetical protein phrog_25094 unknown function unknown function -1 20238 20528
NP_859213.1 NC_004913_p135 hypothetical protein phrog_37455 unknown function unknown function -1 48457 48981
NP_859113.1 NC_004913_p35 hypothetical protein phrog_22407 unknown function unknown function -1 12880 13215
NP_859186.1 NC_004913_p108 hypothetical protein phrog_18788 unknown function unknown function 1 38741 39217
NP_859191.1 NC_004913_p113 CIII protein phrog_550 CIII anti-termination transcription regulation -1 39667 39831
NP_859178.1 NC_004913_p100 hypothetical protein phrog_303 unknown function unknown function -1 37081 37362
NP_859189.1 NC_004913_p111 Gam protein phrog_259 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 39184 39600
NP_859194.1 NC_004913_p116 hypothetical protein phrog_37739 unknown function unknown function 1 40695 40955
NP_859208.1 NC_004913_p130 hypothetical protein phrog_343 unknown function unknown function 1 47050 47328
NP_859126.1 NC_004913_p48 hypothetical protein phrog_22217 unknown function unknown function -1 17501 17755
NP_859234.1 NC_004913_p156 endolysin phrog_7 endolysin lysis 1 55903 56436
NP_859204.1 NC_004913_p126 O protein phrog_345 replication initiation O-like DNA, RNA and nucleotide metabolism 1 44385 45284
NP_859244.1 NC_004913_p166 hypothetical protein phrog_370 terminase small subunit head and packaging 1 58628 59434
NP_859114.1 NC_004913_p36 hypothetical protein phrog_557 outer membrane protein other 1 13738 13965
NP_859135.1 NC_004913_p57 hypothetical protein phrog_26348 unknown function unknown function 1 21337 21870
NP_859160.1 NC_004913_p82 hypothetical protein phrog_22003 unknown function unknown function 1 30920 31276
NP_859096.1 NC_004913_p18 hypothetical protein phrog_399 structural protein head and packaging 1 7304 7954
NP_859163.1 NC_004913_p85 hypothetical protein phrog_539 excisionase integration and excision -1 33280 33579
NP_859158.1 NC_004913_p80 hypothetical protein phrog_22640 unknown function unknown function 1 30661 30909
NP_859211.1 NC_004913_p133 hypothetical protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 47781 48326
NP_859193.1 NC_004913_p115 hypothetical protein phrog_2471 unknown function unknown function -1 40455 40706
NP_859137.1 NC_004913_p59 hypothetical protein phrog_23991 unknown function unknown function -1 21603 22025
NP_859167.1 NC_004913_p89 hypothetical protein phrog_60 unknown function unknown function -1 34298 34921
NP_859099.1 NC_004913_p21 hypothetical protein phrog_366 tail fiber protein tail 1 7951 9888
NP_859165.1 NC_004913_p87 hypothetical protein phrog_20945 unknown function unknown function 1 34009 34311
NP_859106.1 NC_004913_p28 hypothetical protein phrog_19959 unknown function unknown function 1 9266 9511
NP_859157.1 NC_004913_p79 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 30453 30674
NP_859219.1 NC_004913_p141 Q protein phrog_79 anti-termination protein Q-like transcription regulation 1 50339 50812
NP_859104.1 NC_004913_p26 hypothetical protein phrog_26766 unknown function unknown function -1 9111 9404
NP_859203.1 NC_004913_p125 hypothetical protein phrog_191 CII-like transcriptional activator transcription regulation 1 43917 44213
NP_859222.1 NC_004913_p144 Shiga toxin1 subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 52276 52545
NP_859103.1 NC_004913_p25 hypothetical protein phrog_23612 unknown function unknown function -1 8984 9574
NP_859109.1 NC_004913_p31 hypothetical protein phrog_511 internal virion protein head and packaging 1 10704 12407
NP_859151.1 NC_004913_p73 hypothetical protein phrog_19126 unknown function unknown function 1 28646 29395
NP_859149.1 NC_004913_p71 hypothetical protein phrog_1230 unknown function unknown function -1 27982 28326
NP_859100.1 NC_004913_p22 hypothetical protein phrog_2481 unknown function unknown function 1 8321 8815
NP_859134.1 NC_004913_p56 hypothetical protein phrog_24815 unknown function unknown function 1 20992 21252
NP_859119.1 NC_004913_p41 hypothetical protein phrog_610 unknown function unknown function 1 15843 16244
NP_859128.1 NC_004913_p50 hypothetical protein phrog_27633 unknown function unknown function -1 18197 18445
NP_859205.1 NC_004913_p127 hypothetical protein phrog_32009 unknown function unknown function -1 44913 45272
NP_859170.1 NC_004913_p92 hypothetical protein phrog_1832 released from the phage upon host infection other -1 35214 35432
NP_859245.1 NC_004913_p167 hypothetical protein phrog_22365 unknown function unknown function -1 59155 59421
NP_859101.1 NC_004913_p23 hypothetical protein phrog_23477 unknown function unknown function -1 8346 8636
NP_859111.1 NC_004913_p33 hypothetical protein phrog_26911 unknown function unknown function -1 11089 11349
NP_859243.1 NC_004913_p165 hypothetical protein phrog_6954 Rz-like spanin lysis 1 58327 58572
NP_859093.1 NC_004913_p15 hypothetical protein phrog_482 unknown function unknown function 1 6269 6757
NP_859217.1 NC_004913_p139 hypothetical protein singleton unknown function unknown function -1 50146 50457
NP_859127.1 NC_004913_p49 hypothetical protein phrog_601 unknown function unknown function 1 17715 18980
NP_859116.1 NC_004913_p38 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 13971 14588
NP_859117.1 NC_004913_p39 hypothetical protein phrog_108 Lom outer membrane protein other 1 14679 15413
NP_859212.1 NC_004913_p134 hypothetical protein phrog_111 DNA methyltransferase other 1 48323 48850
NP_859232.1 NC_004913_p154 lysis protein phrog_20 holin lysis 1 55608 55898
NP_859122.1 NC_004913_p44 hypothetical protein phrog_22701 unknown function unknown function 1 16708 17064
NP_859097.1 NC_004913_p19 hypothetical protein phrog_22314 unknown function unknown function -1 7556 7861
NP_859185.1 NC_004913_p107 Bet protein phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 38393 39178
NP_859210.1 NC_004913_p132 hypothetical protein phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 47681 47923
NP_859240.1 NC_004913_p162 hypothetical protein phrog_17757 unknown function unknown function -1 57643 57921
NP_859105.1 NC_004913_p27 hypothetical protein phrog_18077 unknown function unknown function -1 9196 10050
NP_859220.1 NC_004913_p142 hypothetical protein phrog_17306 unknown function unknown function -1 50801 51046
NP_859206.1 NC_004913_p128 P protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 45259 46710
NP_859089.1 NC_004913_p11 hypothetical protein phrog_25694 unknown function unknown function 1 5128 5391
NP_859129.1 NC_004913_p51 hypothetical protein phrog_616 unknown function unknown function 1 19011 27431
NP_859121.1 NC_004913_p43 hypothetical protein phrog_611 unknown function unknown function 1 16338 16994
NP_859084.1 NC_004913_p6 hypothetical protein phrog_479 unknown function unknown function 1 3557 4564
NP_859207.1 NC_004913_p129 hypothetical protein phrog_2239 unknown function unknown function 1 46710 46979
NP_859233.1 NC_004913_p155 hypothetical protein phrog_25169 unknown function unknown function -1 55784 56026
NP_859235.1 NC_004913_p157 hypothetical protein phrog_22558 unknown function unknown function -1 55920 56240
NP_859228.1 NC_004913_p150 hypothetical protein singleton unknown function unknown function 1 54518 54646
NP_859120.1 NC_004913_p42 hypothetical protein phrog_23423 unknown function unknown function -1 16085 16336
NP_859125.1 NC_004913_p47 hypothetical protein phrog_594 unknown function unknown function 1 17453 17704
NP_859231.1 NC_004913_p153 hypothetical protein singleton unknown function unknown function -1 55335 55595
NP_859080.1 NC_004913_p2 hypothetical protein phrog_156 portal protein head and packaging 1 1255 3399
NP_859086.1 NC_004913_p8 hypothetical protein phrog_13784 unknown function unknown function 1 4588 5121
NP_859202.1 NC_004913_p124 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 43560 43775
NP_859148.1 NC_004913_p70 hypothetical protein phrog_1925 unknown function unknown function 1 27714 27902
NP_859227.1 NC_004913_p149 hypothetical protein singleton unknown function unknown function 1 53777 54052
NP_859239.1 NC_004913_p161 hypothetical protein phrog_35444 unknown function unknown function -1 57525 57797
NP_859083.1 NC_004913_p5 hypothetical protein phrog_18958 unknown function unknown function -1 3551 3940
NP_859176.1 NC_004913_p98 hypothetical protein phrog_27631 unknown function unknown function -1 36251 36508
NP_859108.1 NC_004913_p30 hypothetical protein phrog_2014 unknown function unknown function 1 10206 10487
NP_859216.1 NC_004913_p138 hypothetical protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 49589 50194
NP_859169.1 NC_004913_p91 hypothetical protein phrog_2821 unknown function unknown function -1 34925 35212
NP_859198.1 NC_004913_p120 hypothetical protein phrog_33559 unknown function unknown function 1 41901 42170
NP_859115.1 NC_004913_p37 hypothetical protein phrog_22484 unknown function unknown function -1 13892 14158
NP_859095.1 NC_004913_p17 hypothetical protein phrog_18985 unknown function unknown function 1 7057 7353
NP_859098.1 NC_004913_p20 hypothetical protein phrog_23554 unknown function unknown function 1 7743 7988
NP_859201.1 NC_004913_p123 hypothetical protein phrog_30488 unknown function unknown function -1 43109 43354
NP_859223.1 NC_004913_p145 hypothetical protein singleton unknown function unknown function -1 52606 52929
NP_859118.1 NC_004913_p40 hypothetical protein phrog_24458 unknown function unknown function -1 15344 15589
NP_859085.1 NC_004913_p7 hypothetical protein phrog_24828 unknown function unknown function -1 4084 4440
NP_859088.1 NC_004913_p10 hypothetical protein phrog_334 major head protein head and packaging 1 5118 5801
NP_859209.1 NC_004913_p131 hypothetical protein phrog_1785 unknown function unknown function 1 47461 47676
NP_859225.1 NC_004913_p147 hypothetical protein phrog_25016 unknown function unknown function -1 53295 53663
NP_859082.1 NC_004913_p4 hypothetical protein phrog_23519 unknown function unknown function -1 2993 3253
NP_859154.1 NC_004913_p76 hypothetical protein phrog_23547 unknown function unknown function 1 29380 29748
NP_859184.1 NC_004913_p106 hypothetical protein phrog_22877 unknown function unknown function 1 38322 38672
NP_859182.1 NC_004913_p104 hypothetical protein phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 37716 38396
NP_859142.1 NC_004913_p64 hypothetical protein phrog_25517 unknown function unknown function -1 24573 24854
NP_859131.1 NC_004913_p53 hypothetical protein phrog_22242 unknown function unknown function 1 20143 20457
NP_859237.1 NC_004913_p159 hypothetical protein phrog_35007 unknown function unknown function -1 56745 56993
NP_859196.1 NC_004913_p118 hypothetical protein phrog_22865 unknown function unknown function 1 41322 41588
NP_859175.1 NC_004913_p97 hypothetical protein phrog_13760 unknown function unknown function 1 36217 36567
NP_859168.1 NC_004913_p90 hypothetical protein phrog_23824 unknown function unknown function 1 34584 34832
NP_859145.1 NC_004913_p67 hypothetical protein phrog_23367 unknown function unknown function 1 25912 26220
NP_859155.1 NC_004913_p77 hypothetical protein phrog_13760 unknown function unknown function 1 29735 30019
NP_859192.1 NC_004913_p114 Ea10 protein phrog_646 unknown function unknown function -1 39904 40272
NP_859199.1 NC_004913_p121 hypothetical protein phrog_28341 unknown function unknown function 1 42205 42447
NP_859139.1 NC_004913_p61 hypothetical protein phrog_23644 unknown function unknown function 1 22183 22464
NP_859159.1 NC_004913_p81 hypothetical protein phrog_377 anti-repressor Ant transcription regulation -1 30722 31351
NP_859218.1 NC_004913_p140 hypothetical protein phrog_268 unknown function unknown function 1 50221 50385
NP_859242.1 NC_004913_p164 Bor protein precursor phrog_260 Bor-like outer membrane protein other -1 57926 58219
NP_859081.1 NC_004913_p3 hypothetical protein phrog_22625 unknown function unknown function 1 2483 2749
NP_859146.1 NC_004913_p68 hypothetical protein phrog_23924 unknown function unknown function -1 26349 26612
NP_859152.1 NC_004913_p74 hypothetical protein phrog_1621 unknown function unknown function -1 28892 29362
NP_859230.1 NC_004913_p152 hypothetical protein phrog_8301 unknown function unknown function 1 55186 55605
NP_859147.1 NC_004913_p69 hypothetical protein phrog_23872 unknown function unknown function -1 26922 27173
NP_859094.1 NC_004913_p16 hypothetical protein phrog_437 virion structural protein head and packaging 1 6633 7304
NP_859195.1 NC_004913_p117 N protein phrog_271 anti-termination protein N-like transcription regulation -1 40765 41109
NP_859091.1 NC_004913_p13 hypothetical protein phrog_22380 unknown function unknown function 1 5951 6211
NP_859087.1 NC_004913_p9 hypothetical protein phrog_17229 unknown function unknown function -1 4947 5261
NP_859124.1 NC_004913_p46 hypothetical protein phrog_596 unknown function unknown function 1 16997 17443
NP_859221.1 NC_004913_p143 Shiga toxin1 subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 51319 52266
NP_859183.1 NC_004913_p105 hypothetical protein phrog_23778 unknown function unknown function 1 38299 38565
NP_859164.1 NC_004913_p86 hypothetical protein phrog_3680 unknown function unknown function -1 33650 33961
NP_859138.1 NC_004913_p60 hypothetical protein phrog_19234 unknown function unknown function -1 22054 22377
NP_859172.1 NC_004913_p94 hypothetical protein phrog_926 unknown function unknown function -1 35434 35721
NP_859107.1 NC_004913_p29 hypothetical protein phrog_576 tail fiber protein tail 1 9770 10159
NP_859140.1 NC_004913_p62 hypothetical protein phrog_25248 unknown function unknown function 1 23104 23361
NP_859141.1 NC_004913_p63 hypothetical protein phrog_21936 unknown function unknown function -1 24481 24906
NP_859179.1 NC_004913_p101 hypothetical protein phrog_292 unknown function unknown function -1 37373 37564
NP_859132.1 NC_004913_p54 hypothetical protein phrog_23740 unknown function unknown function -1 20164 20517
NP_859171.1 NC_004913_p93 hypothetical protein phrog_20982 unknown function unknown function 1 35251 35547
NP_859241.1 NC_004913_p163 Rz1 protein precursor phrog_3198 Rz-like spanin lysis 1 57650 57835
NP_859215.1 NC_004913_p137 hypothetical protein phrog_1511 unknown function unknown function 1 48984 49427
NP_859112.1 NC_004913_p34 hypothetical protein phrog_496 tail fiber protein tail 1 12404 13672
NP_859156.1 NC_004913_p78 hypothetical protein phrog_667 unknown function unknown function -1 30172 30456
NP_859238.1 NC_004913_p160 endopeptidase phrog_13 Rz-like spanin lysis 1 57430 57894
NP_859200.1 NC_004913_p122 CI protein phrog_4 transcriptional repressor transcription regulation -1 42789 43484
NP_859102.1 NC_004913_p24 hypothetical protein phrog_7242 unknown function unknown function 1 8951 9199
NP_859092.1 NC_004913_p14 hypothetical protein phrog_19479 unknown function unknown function -1 6182 6454
NP_859224.1 NC_004913_p146 hypothetical protein phrog_143 unknown function unknown function 1 53056 55002
NP_859144.1 NC_004913_p66 hypothetical protein phrog_23348 unknown function unknown function -1 25613 26002
NP_859229.1 NC_004913_p151 hypothetical protein phrog_494 unknown function unknown function 1 55140 55319
NP_859174.1 NC_004913_p96 hypothetical protein phrog_250 unknown function unknown function -1 35991 36764
NP_859130.1 NC_004913_p52 hypothetical protein phrog_27622 unknown function unknown function -1 19577 19825
NP_859143.1 NC_004913_p65 hypothetical protein phrog_21686 unknown function unknown function -1 25257 25628
NP_859214.1 NC_004913_p136 hypothetical protein phrog_288 unknown function unknown function 1 48847 49023
NP_859226.1 NC_004913_p148 hypothetical protein phrog_25251 unknown function unknown function -1 53695 54036
NP_859197.1 NC_004913_p119 hypothetical protein phrog_2602 unknown function unknown function -1 41766 42287
NP_859162.1 NC_004913_p84 hypothetical protein phrog_1 integrase integration and excision -1 31917 33251
NP_859161.1 NC_004913_p83 hypothetical protein phrog_24266 unknown function unknown function 1 31738 32013
NP_859190.1 NC_004913_p112 Kil protein phrog_2461 Kil protein for bacterial septation inhibition other -1 39555 39824
NP_859188.1 NC_004913_p110 hypothetical protein phrog_27890 unknown function unknown function -1 39138 39410
NP_859153.1 NC_004913_p75 hypothetical protein phrog_60 unknown function unknown function -1 29287 29946
NP_859110.1 NC_004913_p32 hypothetical protein phrog_24576 unknown function unknown function -1 10722 11117
NP_859177.1 NC_004913_p99 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 36761 36982
NP_859181.1 NC_004913_p103 hypothetical protein phrog_1998 unknown function unknown function -1 37537 37725
NP_859079.1 NC_004913_p1 hypothetical protein phrog_2 terminase large subunit head and packaging 1 1 1255
NP_859079.1 NC_004913_p1 hypothetical protein phrog_2 terminase large subunit head and packaging 1 59415 59866
NP_859136.1 NC_004913_p58 hypothetical protein phrog_22954 unknown function unknown function -1 21385 21687
NP_859187.1 NC_004913_p109 hypothetical protein phrog_22813 unknown function unknown function 1 39045 39296
NP_859173.1 NC_004913_p95 hypothetical protein phrog_12350 unknown function unknown function -1 35651 36118
NP_859166.1 NC_004913_p88 hypothetical protein phrog_625 unknown function unknown function -1 34021 34386