Genomic map of Escherichia phage Stx2 II (NC_004914)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004914
Definition
Stx2 converting phage II DNA, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Sepvirinae; Traversvirus.
DB of origin
REFSEQ
Length
62706
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
170
%GC
49.9
Number of singletons
2
Number of paralogs
4

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_859357.1 NC_004914_p112 CIII protein phrog_550 CIII anti-termination transcription regulation -1 39667 39831
NP_859320.1 NC_004914_p75 hypothetical protein phrog_23547 unknown function unknown function 1 29380 29748
NP_859329.1 NC_004914_p84 hypothetical protein phrog_539 excisionase integration and excision -1 33280 33579
NP_859377.1 NC_004914_p131 hypothetical protein phrog_599 Lar-like restriction alleviation protein moron, auxiliary metabolic gene and host takeover 1 47680 47922
NP_859356.1 NC_004914_p111 Kil protein phrog_2461 Kil protein for bacterial septation inhibition other -1 39555 39824
NP_859399.1 NC_004914_p153 hypothetical protein phrog_6393 unknown function unknown function 1 57550 57819
NP_859414.1 NC_004914_p168 hypothetical protein phrog_6954 Rz-like spanin lysis 1 61167 61412
NP_859337.1 NC_004914_p92 hypothetical protein phrog_20982 unknown function unknown function 1 35251 35547
NP_859318.1 NC_004914_p73 hypothetical protein phrog_1621 unknown function unknown function -1 28892 29362
NP_859335.1 NC_004914_p90 hypothetical protein phrog_2821 unknown function unknown function -1 34925 35212
NP_859307.1 NC_004914_p62 hypothetical protein phrog_21936 unknown function unknown function -1 24482 24907
NP_859363.1 NC_004914_p118 hypothetical protein phrog_2602 unknown function unknown function -1 41766 42287
NP_859326.1 NC_004914_p81 hypothetical protein phrog_22003 unknown function unknown function 1 30920 31276
NP_859247.1 NC_004914_p2 hypothetical protein phrog_156 portal protein head and packaging 1 1255 3399
NP_859251.1 NC_004914_p6 hypothetical protein phrog_479 unknown function unknown function 1 3557 4564
NP_859361.1 NC_004914_p116 N protein phrog_271 anti-termination protein N-like transcription regulation -1 40765 41109
NP_859369.1 NC_004914_p124 CII protein phrog_191 CII-like transcriptional activator transcription regulation 1 43917 44213
NP_859400.1 NC_004914_p154 hypothetical protein phrog_9558 unknown function unknown function 1 57816 57941
NP_859288.1 NC_004914_p43 hypothetical protein phrog_22701 unknown function unknown function 1 16709 17065
NP_859325.1 NC_004914_p80 hypothetical protein phrog_377 anti-repressor Ant transcription regulation -1 30722 31351
NP_859385.1 NC_004914_p139 hypothetical protein phrog_171 NinG/ Rap DNA junction specific endonuclease DNA, RNA and nucleotide metabolism 1 50834 51439
NP_859256.1 NC_004914_p11 hypothetical protein phrog_486 virion structural protein head and packaging 1 5858 6247
NP_859365.1 NC_004914_p120 hypothetical protein phrog_28341 unknown function unknown function 1 42205 42447
NP_859264.1 NC_004914_p19 hypothetical protein phrog_23554 unknown function unknown function 1 7744 7989
NP_859368.1 NC_004914_p123 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 43560 43775
NP_859292.1 NC_004914_p47 hypothetical protein phrog_22217 unknown function unknown function -1 17502 17756
NP_859406.1 NC_004914_p160 hypothetical protein phrog_22558 unknown function unknown function -1 58760 59080
NP_859319.1 NC_004914_p74 hypothetical protein phrog_60 unknown function unknown function -1 29287 29946
NP_859294.1 NC_004914_p49 hypothetical protein phrog_27633 unknown function unknown function -1 18198 18446
NP_859262.1 NC_004914_p17 hypothetical protein phrog_399 structural protein head and packaging 1 7305 7955
NP_859311.1 NC_004914_p66 hypothetical protein phrog_23367 unknown function unknown function 1 25913 26221
NP_859328.1 NC_004914_p83 hypothetical protein phrog_1 integrase integration and excision -1 31917 33251
NP_859397.1 NC_004914_p151 hypothetical protein singleton unknown function unknown function 1 57160 57411
NP_859271.1 NC_004914_p26 hypothetical protein phrog_18077 unknown function unknown function -1 9197 10051
NP_859370.1 NC_004914_p125 O protein singleton unknown function unknown function 1 44385 45029
NP_859267.1 NC_004914_p22 hypothetical protein phrog_23477 unknown function unknown function -1 8347 8637
NP_859376.1 NC_004914_p130 hypothetical protein phrog_1785 unknown function unknown function 1 47460 47675
NP_859314.1 NC_004914_p69 hypothetical protein phrog_1925 unknown function unknown function 1 27714 27902
NP_859274.1 NC_004914_p29 hypothetical protein phrog_2014 unknown function unknown function 1 10207 10488
NP_859388.1 NC_004914_p142 hypothetical protein phrog_35146 unknown function unknown function -1 51864 52163
NP_859403.1 NC_004914_p157 lysis protein phrog_20 holin lysis 1 58523 58738
NP_859248.1 NC_004914_p3 hypothetical protein phrog_22625 unknown function unknown function 1 2483 2749
NP_859306.1 NC_004914_p61 hypothetical protein phrog_25248 unknown function unknown function 1 23105 23362
NP_859309.1 NC_004914_p64 hypothetical protein phrog_21686 unknown function unknown function -1 25258 25629
NP_859286.1 NC_004914_p41 hypothetical protein phrog_23423 unknown function unknown function -1 16086 16337
NP_859270.1 NC_004914_p25 hypothetical protein phrog_26766 unknown function unknown function -1 9112 9405
NP_859322.1 NC_004914_p77 hypothetical protein phrog_667 unknown function unknown function -1 30172 30456
NP_859297.1 NC_004914_p52 hypothetical protein phrog_22242 unknown function unknown function 1 20144 20458
NP_859392.1 NC_004914_p146 hypothetical protein phrog_143 unknown function unknown function 1 54568 56472
NP_859285.1 NC_004914_p40 hypothetical protein phrog_610 unknown function unknown function 1 15844 16245
NP_859310.1 NC_004914_p65 hypothetical protein phrog_23348 unknown function unknown function -1 25614 26003
NP_859359.1 NC_004914_p114 hypothetical protein phrog_2471 unknown function unknown function -1 40455 40706
NP_859257.1 NC_004914_p12 hypothetical protein phrog_22380 unknown function unknown function 1 5952 6212
NP_859362.1 NC_004914_p117 hypothetical protein phrog_22865 unknown function unknown function 1 41322 41588
NP_859290.1 NC_004914_p45 hypothetical protein phrog_596 unknown function unknown function 1 16998 17444
NP_859278.1 NC_004914_p33 hypothetical protein phrog_496 tail fiber protein tail 1 12405 13673
NP_859343.1 NC_004914_p98 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 36761 36982
NP_859321.1 NC_004914_p76 hypothetical protein phrog_13760 unknown function unknown function 1 29735 30019
NP_859254.1 NC_004914_p9 hypothetical protein phrog_17229 unknown function unknown function -1 4978 5262
NP_859381.1 NC_004914_p135 hypothetical protein phrog_288 unknown function unknown function 1 48846 49028
NP_859312.1 NC_004914_p67 hypothetical protein phrog_23924 unknown function unknown function -1 26350 26736
NP_859277.1 NC_004914_p32 hypothetical protein phrog_26911 unknown function unknown function -1 11090 11350
NP_859410.1 NC_004914_p164 hypothetical protein phrog_35444 unknown function unknown function -1 60365 60637
NP_859415.1 NC_004914_p169 hypothetical protein phrog_370 terminase small subunit head and packaging 1 61468 62274
NP_859249.1 NC_004914_p4 hypothetical protein phrog_23519 unknown function unknown function -1 2993 3253
NP_859333.1 NC_004914_p88 hypothetical protein phrog_60 unknown function unknown function -1 34298 34921
NP_859287.1 NC_004914_p42 hypothetical protein phrog_611 unknown function unknown function 1 16339 16995
NP_859327.1 NC_004914_p82 hypothetical protein phrog_24266 unknown function unknown function 1 31738 32013
NP_859301.1 NC_004914_p56 hypothetical protein phrog_26348 unknown function unknown function 1 21338 21871
NP_859413.1 NC_004914_p167 Bor protein precursor phrog_260 Bor-like outer membrane protein other -1 60766 61059
NP_859404.1 NC_004914_p158 hypothetical protein phrog_25169 unknown function unknown function -1 58624 58866
NP_859295.1 NC_004914_p50 hypothetical protein phrog_616 unknown function unknown function 1 19012 26742
NP_859402.1 NC_004914_p156 hypothetical protein phrog_8301 unknown function unknown function 1 58000 58446
NP_859340.1 NC_004914_p95 hypothetical protein phrog_250 unknown function unknown function -1 35991 36764
NP_859323.1 NC_004914_p78 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 30453 30674
NP_859354.1 NC_004914_p109 hypothetical protein phrog_27890 unknown function unknown function -1 39138 39410
NP_859349.1 NC_004914_p104 hypothetical protein phrog_23778 unknown function unknown function 1 38299 38565
NP_859339.1 NC_004914_p94 hypothetical protein phrog_12350 unknown function unknown function -1 35651 36118
NP_859330.1 NC_004914_p85 hypothetical protein phrog_3680 unknown function unknown function -1 33650 33961
NP_859390.1 NC_004914_p144 Shiga toxin2 subunit A phrog_866 Shiga toxin subunit A moron, auxiliary metabolic gene and host takeover 1 52841 53800
NP_859263.1 NC_004914_p18 hypothetical protein phrog_22314 unknown function unknown function -1 7557 7862
NP_859393.1 NC_004914_p147 hypothetical protein phrog_25016 unknown function unknown function -1 54822 55166
NP_859347.1 NC_004914_p102 hypothetical protein phrog_1998 unknown function unknown function -1 37537 37725
NP_859411.1 NC_004914_p165 hypothetical protein phrog_17757 unknown function unknown function -1 60483 60761
NP_859246.1 NC_004914_p1 hypothetical protein phrog_2 terminase large subunit head and packaging 1 1 1255
NP_859246.1 NC_004914_p1 hypothetical protein phrog_2 terminase large subunit head and packaging 1 62255 62706
NP_859398.1 NC_004914_p152 hypothetical protein phrog_151 transposase integration and excision -1 57166 57492
NP_859407.1 NC_004914_p161 Ant protein phrog_524 anti-repressor Ant transcription regulation 1 59547 60116
NP_859366.1 NC_004914_p121 CI protein phrog_4 transcriptional repressor transcription regulation -1 42789 43484
NP_859296.1 NC_004914_p51 hypothetical protein phrog_27622 unknown function unknown function -1 19578 19826
NP_859279.1 NC_004914_p34 hypothetical protein phrog_22407 unknown function unknown function -1 12881 13216
NP_859338.1 NC_004914_p93 hypothetical protein phrog_926 unknown function unknown function -1 35434 35721
NP_859341.1 NC_004914_p96 hypothetical protein phrog_13760 unknown function unknown function 1 36217 36567
NP_859303.1 NC_004914_p58 hypothetical protein phrog_23991 unknown function unknown function -1 21604 22026
NP_859344.1 NC_004914_p99 hypothetical protein phrog_303 unknown function unknown function -1 37081 37362
NP_859387.1 NC_004914_p141 Q protein phrog_79 anti-termination protein Q-like transcription regulation 1 51584 52057
NP_859258.1 NC_004914_p13 hypothetical protein phrog_19479 unknown function unknown function -1 6183 6455
NP_859276.1 NC_004914_p31 hypothetical protein phrog_24576 unknown function unknown function -1 10723 11118
NP_859261.1 NC_004914_p16 hypothetical protein phrog_18985 unknown function unknown function 1 7058 7354
NP_859346.1 NC_004914_p101 hypothetical protein phrog_18463 unknown function unknown function 1 37516 37842
NP_859304.1 NC_004914_p59 hypothetical protein phrog_19234 unknown function unknown function -1 22055 22378
NP_859367.1 NC_004914_p122 hypothetical protein phrog_30488 unknown function unknown function -1 43109 43354
NP_859374.1 NC_004914_p129 hypothetical protein phrog_343 unknown function unknown function 1 47049 47327
NP_859351.1 NC_004914_p106 Bet protein phrog_252 Bet-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 38393 39178
NP_859252.1 NC_004914_p7 hypothetical protein phrog_24828 unknown function unknown function -1 4084 4440
NP_859282.1 NC_004914_p37 hypothetical protein phrog_425 membrane associated protein moron, auxiliary metabolic gene and host takeover 1 13972 14589
NP_859317.1 NC_004914_p72 hypothetical protein phrog_19126 unknown function unknown function 1 28646 29395
NP_859283.1 NC_004914_p38 hypothetical protein phrog_108 Lom outer membrane protein other 1 14680 15414
NP_859331.1 NC_004914_p86 hypothetical protein phrog_20945 unknown function unknown function 1 34009 34311
NP_859416.1 NC_004914_p170 hypothetical protein phrog_22365 unknown function unknown function -1 61995 62261
NP_859315.1 NC_004914_p70 hypothetical protein phrog_1230 unknown function unknown function -1 27982 28326
NP_859342.1 NC_004914_p97 hypothetical protein phrog_27631 unknown function unknown function -1 36251 36508
NP_859408.1 NC_004914_p162 hypothetical protein phrog_35007 unknown function unknown function -1 59585 59833
NP_859289.1 NC_004914_p44 hypothetical protein phrog_25638 unknown function unknown function -1 16996 17502
NP_859281.1 NC_004914_p36 hypothetical protein phrog_22484 unknown function unknown function -1 13893 14159
NP_859345.1 NC_004914_p100 hypothetical protein phrog_292 unknown function unknown function -1 37373 37564
NP_859382.1 NC_004914_p136 hypothetical protein phrog_377 anti-repressor Ant transcription regulation 1 49303 50037
NP_859273.1 NC_004914_p28 hypothetical protein phrog_576 tail fiber protein tail 1 9771 10160
NP_859384.1 NC_004914_p138 hypothetical protein phrog_28914 unknown function unknown function -1 50280 50624
NP_859324.1 NC_004914_p79 hypothetical protein phrog_22640 unknown function unknown function 1 30661 30909
NP_859272.1 NC_004914_p27 hypothetical protein phrog_19959 unknown function unknown function 1 9267 9512
NP_859405.1 NC_004914_p159 endolysin phrog_7 endolysin lysis 1 58743 59276
NP_859380.1 NC_004914_p134 hypothetical protein phrog_37455 unknown function unknown function -1 48456 48980
NP_859395.1 NC_004914_p149 hypothetical protein phrog_29139 unknown function unknown function 1 55695 55955
NP_859255.1 NC_004914_p10 hypothetical protein phrog_25694 unknown function unknown function 1 5129 5392
NP_859293.1 NC_004914_p48 hypothetical protein phrog_601 unknown function unknown function 1 17716 18981
NP_859396.1 NC_004914_p150 hypothetical protein phrog_157 transposase integration and excision -1 56279 57169
NP_859409.1 NC_004914_p163 endopeptidase phrog_13 Rz-like spanin lysis 1 60270 60734
NP_859383.1 NC_004914_p137 hypothetical protein phrog_63 anti-repressor Ant transcription regulation 1 50106 50834
NP_859265.1 NC_004914_p20 hypothetical protein phrog_366 tail fiber protein tail 1 7952 9889
NP_859372.1 NC_004914_p127 P protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 45258 46709
NP_859332.1 NC_004914_p87 hypothetical protein phrog_625 unknown function unknown function -1 34021 34386
NP_859373.1 NC_004914_p128 hypothetical protein phrog_2239 unknown function unknown function 1 46709 46978
NP_859386.1 NC_004914_p140 hypothetical protein phrog_268 unknown function unknown function 1 51466 51630
NP_859371.1 NC_004914_p126 hypothetical protein phrog_32009 unknown function unknown function -1 44855 45271
NP_859379.1 NC_004914_p133 hypothetical protein phrog_111 DNA methyltransferase other 1 48322 48849
NP_859260.1 NC_004914_p15 hypothetical protein phrog_437 virion structural protein head and packaging 1 6634 7305
NP_859364.1 NC_004914_p119 hypothetical protein phrog_33559 unknown function unknown function 1 41901 42170
NP_859284.1 NC_004914_p39 hypothetical protein phrog_24458 unknown function unknown function -1 15345 15590
NP_859302.1 NC_004914_p57 hypothetical protein phrog_22954 unknown function unknown function -1 21386 21688
NP_859308.1 NC_004914_p63 hypothetical protein phrog_25517 unknown function unknown function -1 24574 24855
NP_859378.1 NC_004914_p132 hypothetical protein phrog_72 NinB/ Orf homologous recombination mediator DNA, RNA and nucleotide metabolism 1 47780 48325
NP_859300.1 NC_004914_p55 hypothetical protein phrog_24815 unknown function unknown function 1 20993 21253
NP_859360.1 NC_004914_p115 hypothetical protein phrog_37739 unknown function unknown function 1 40695 40955
NP_859313.1 NC_004914_p68 hypothetical protein phrog_23872 unknown function unknown function -1 26922 27173
NP_859355.1 NC_004914_p110 Gam protein phrog_259 gam-like host nuclease inhibitor moron, auxiliary metabolic gene and host takeover -1 39184 39600
NP_859412.1 NC_004914_p166 Rz1 protein precursor phrog_3198 Rz-like spanin lysis 1 60490 60675
NP_859389.1 NC_004914_p143 hypothetical protein phrog_17306 unknown function unknown function -1 52046 52291
NP_859316.1 NC_004914_p71 hypothetical protein phrog_251 MokW-like host killing moron, auxiliary metabolic gene and host takeover -1 28446 28658
NP_859391.1 NC_004914_p145 Shiga toxin2 subunit B phrog_851 Shiga toxin subunit B moron, auxiliary metabolic gene and host takeover 1 53812 54081
NP_859269.1 NC_004914_p24 hypothetical protein phrog_23612 unknown function unknown function -1 8985 9575
NP_859250.1 NC_004914_p5 hypothetical protein phrog_18958 unknown function unknown function -1 3551 3940
NP_859291.1 NC_004914_p46 hypothetical protein phrog_594 unknown function unknown function 1 17454 17705
NP_859305.1 NC_004914_p60 hypothetical protein phrog_23644 unknown function unknown function 1 22184 22465
NP_859268.1 NC_004914_p23 hypothetical protein phrog_7242 unknown function unknown function 1 8952 9200
NP_859358.1 NC_004914_p113 Ea10 protein phrog_646 unknown function unknown function -1 39904 40272
NP_859334.1 NC_004914_p89 hypothetical protein phrog_23824 unknown function unknown function 1 34584 34832
NP_859394.1 NC_004914_p148 hypothetical protein phrog_25251 unknown function unknown function -1 55198 55539
NP_859266.1 NC_004914_p21 hypothetical protein phrog_2481 unknown function unknown function 1 8322 8816
NP_859336.1 NC_004914_p91 hypothetical protein phrog_1832 released from the phage upon host infection other -1 35214 35432
NP_859348.1 NC_004914_p103 hypothetical protein phrog_149 exonuclease DNA, RNA and nucleotide metabolism -1 37716 38396
NP_859298.1 NC_004914_p53 hypothetical protein phrog_23740 unknown function unknown function -1 20165 20518
NP_859299.1 NC_004914_p54 hypothetical protein phrog_25094 unknown function unknown function -1 20239 20529
NP_859280.1 NC_004914_p35 hypothetical protein phrog_557 outer membrane protein other 1 13739 13966
NP_859259.1 NC_004914_p14 hypothetical protein phrog_482 unknown function unknown function 1 6270 6758
NP_859401.1 NC_004914_p155 hypothetical protein phrog_494 unknown function unknown function 1 57954 58133
NP_859350.1 NC_004914_p105 hypothetical protein phrog_22877 unknown function unknown function 1 38322 38672
NP_859275.1 NC_004914_p30 hypothetical protein phrog_511 internal virion protein head and packaging 1 10705 12408
NP_859353.1 NC_004914_p108 hypothetical protein phrog_22813 unknown function unknown function 1 39045 39296
NP_859352.1 NC_004914_p107 hypothetical protein phrog_18788 unknown function unknown function 1 38741 39217
NP_859253.1 NC_004914_p8 hypothetical protein phrog_334 major head protein head and packaging 1 4588 5802