Genomic map of Streptococcus phage SM1 (NC_004996)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_004996
Definition
Streptococcus phage SM1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
34692
Host Name
Streptococcus mitis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
56
%GC
39.15
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_862863.1 NC_004996_p24 hypothetical protein phrog_834 unknown function unknown function 1 11963 12289
NP_862894.1 NC_004996_p55 hypothetical protein phrog_608 holin lysis 1 32918 33250
NP_862849.1 NC_004996_p10 hypothetical protein phrog_20017 unknown function unknown function 1 4316 4468
NP_862840.1 NC_004996_p1 hypothetical protein phrog_1 integrase integration and excision -1 103 1230
NP_862854.1 NC_004996_p15 hypothetical protein phrog_463 anti-repressor transcription regulation 1 6213 6932
NP_862844.1 NC_004996_p5 hypothetical protein phrog_4791 unknown function unknown function 1 2829 2957
NP_862851.1 NC_004996_p12 hypothetical protein phrog_24094 unknown function unknown function 1 5138 5368
NP_862888.1 NC_004996_p49 PblA phrog_58 tail length tape measure protein tail 1 24752 27775
NP_862877.1 NC_004996_p38 hypothetical protein phrog_9 terminase large subunit head and packaging 1 19068 20447
NP_862889.1 NC_004996_p50 hypothetical protein phrog_33 distal tail protein Dit tail 1 27775 28470
NP_862885.1 NC_004996_p46 hypothetical protein phrog_117 major tail protein tail 1 23492 24043
NP_862876.1 NC_004996_p37 hypothetical protein phrog_918 unknown function unknown function 1 18753 19004
NP_862891.1 NC_004996_p52 hypothetical protein phrog_12683 unknown function unknown function 1 31652 31861
NP_862842.1 NC_004996_p3 hypothetical protein phrog_87 metallo-protease other -1 1804 2184
NP_862870.1 NC_004996_p31 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 14087 14512
NP_862850.1 NC_004996_p11 hypothetical protein phrog_3634 unknown function unknown function -1 4422 5081
NP_862843.1 NC_004996_p4 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 2188 2541
NP_862852.1 NC_004996_p13 hypothetical protein phrog_6249 unknown function unknown function 1 5390 5518
NP_862878.1 NC_004996_p39 hypothetical protein phrog_233 head scaffolding protein head and packaging 1 20597 21031
NP_862860.1 NC_004996_p21 hypothetical protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 8995 9765
NP_862861.1 NC_004996_p22 hypothetical protein phrog_7445 unknown function unknown function 1 10112 10585
NP_862887.1 NC_004996_p48 hypothetical protein phrog_1633 unknown function unknown function 1 24372 24752
NP_862874.1 NC_004996_p35 hypothetical protein phrog_2494 minor head protein head and packaging 1 17210 18421
NP_862857.1 NC_004996_p18 hypothetical protein phrog_33499 unknown function unknown function 1 7610 8038
NP_862856.1 NC_004996_p17 hypothetical protein phrog_17359 unknown function unknown function 1 7337 7594
NP_862853.1 NC_004996_p14 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism -1 5481 6158
NP_862868.1 NC_004996_p29 hypothetical protein phrog_236 nucleotide kinase other 1 13674 13925
NP_862883.1 NC_004996_p44 hypothetical protein phrog_387 neck protein connector 1 22904 23140
NP_862869.1 NC_004996_p30 hypothetical protein phrog_17529 unknown function unknown function 1 13903 14067
NP_862879.1 NC_004996_p40 hypothetical protein phrog_10 major head protein head and packaging 1 21044 21946
NP_862882.1 NC_004996_p43 hypothetical protein phrog_501 head closure Hc1 connector 1 22573 22911
NP_862873.1 NC_004996_p34 hypothetical protein phrog_104 portal protein head and packaging 1 15988 17220
NP_862847.1 NC_004996_p8 hypothetical protein phrog_3 transcriptional repressor transcription regulation 1 3895 4104
NP_862859.1 NC_004996_p20 hypothetical protein phrog_2108 unknown function unknown function 1 8843 9001
NP_862872.1 NC_004996_p33 hypothetical protein phrog_338 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15403 15747
NP_862886.1 NC_004996_p47 hypothetical protein phrog_1526 unknown function unknown function 1 24046 24357
NP_862893.1 NC_004996_p54 hypothetical protein phrog_4257 unknown function unknown function 1 32515 32931
NP_862871.1 NC_004996_p32 hypothetical protein phrog_216 integrase integration and excision 1 14625 15191
NP_862858.1 NC_004996_p19 hypothetical protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 8058 8855
NP_862855.1 NC_004996_p16 hypothetical protein phrog_2273 unknown function unknown function 1 7015 7287
NP_862862.1 NC_004996_p23 hypothetical protein phrog_7484 unknown function unknown function 1 10585 11943
NP_862848.1 NC_004996_p9 hypothetical protein phrog_3168 unknown function unknown function 1 4108 4305
NP_862867.1 NC_004996_p28 hypothetical protein phrog_3476 unknown function unknown function 1 13175 13591
NP_862846.1 NC_004996_p7 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism -1 3160 3840
NP_862895.1 NC_004996_p56 hypothetical protein phrog_998 endolysin lysis 1 33253 34140
NP_862881.1 NC_004996_p42 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 22191 22586
NP_862875.1 NC_004996_p36 hypothetical protein phrog_6332 unknown function unknown function 1 18411 18590
NP_862865.1 NC_004996_p26 hypothetical protein phrog_2118 HNH endonuclease DNA, RNA and nucleotide metabolism 1 12580 12921
NP_862845.1 NC_004996_p6 hypothetical protein phrog_14088 unknown function unknown function 1 2972 3184
NP_862892.1 NC_004996_p53 hypothetical protein phrog_1554 unknown function unknown function 1 31851 32498
NP_862890.1 NC_004996_p51 PblB phrog_1330 tail protein tail 1 28467 31655
NP_862884.1 NC_004996_p45 hypothetical protein phrog_123 tail terminator connector 1 23141 23476
NP_862864.1 NC_004996_p25 hypothetical protein phrog_33566 unknown function unknown function 1 12323 12583
NP_862841.1 NC_004996_p2 hypothetical protein phrog_29766 unknown function unknown function -1 1351 1791
NP_862866.1 NC_004996_p27 hypothetical protein phrog_884 unknown function unknown function 1 12918 13178
NP_862880.1 NC_004996_p41 hypothetical protein phrog_1539 Arc-like repressor transcription regulation 1 21949 22170