Genomic map of Pseudomonas phage phiKMV (NC_005045)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_005045
Definition
Pseudomonas phage phiKMV, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Krylovirinae; Phikmvvirus.
DB of origin
REFSEQ
Length
42519
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
49
%GC
62.29
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_877444.1 NC_005045_p5 hypothetical protein phrog_7027 unknown function unknown function 1 3160 3387
NP_877485.1 NC_005045_p47 phage lambda Rz1-like protein phrog_214 Rz-like spanin lysis 1 40985 41314
NP_877478.1 NC_005045_p40 hypothetical protein phrog_17567 unknown function unknown function 1 36336 36776
NP_877452.1 NC_005045_p14 hypothetical protein phrog_2563 unknown function unknown function 1 6582 7124
NP_877453.1 NC_005045_p15 DnaG-like primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 7310 8134
NP_877451.1 NC_005045_p12 DNA binding protein phrog_6982 DNA polymerase DNA, RNA and nucleotide metabolism 1 5503 6312
NP_877469.1 NC_005045_p31 head-tail connector protein phrog_449 head-tail adaptor connector 1 21623 23155
NP_877462.1 NC_005045_p24 DNA endonuclease VII phrog_423 endonuclease VII DNA, RNA and nucleotide metabolism 1 16022 16462
NP_877473.1 NC_005045_p35 tail tubular protein B phrog_457 tail protein tail 1 25841 28321
NP_877457.1 NC_005045_p19 hypothetical protein phrog_7292 unknown function unknown function 1 10922 11257
NP_877484.1 NC_005045_p46 phage lysozyme phrog_7 endolysin lysis 1 40545 41027
NP_877454.1 NC_005045_p16 hypothetical protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 8178 9371
YP_656507.1 NC_005045_p13 hypothetical protein phrog_9409 unknown function unknown function 1 6392 6811
NP_877443.1 NC_005045_p4 hypothetical protein phrog_6951 unknown function unknown function 1 2805 3173
NP_877450.1 NC_005045_p11 hypothetical protein phrog_6915 unknown function unknown function 1 5141 5500
NP_877471.1 NC_005045_p33 capsid protein phrog_267 major head protein head and packaging 1 24180 25187
NP_877440.1 NC_005045_p1 hypothetical protein phrog_5722 unknown function unknown function 1 1746 2030
NP_877466.1 NC_005045_p28 hypothetical protein phrog_6575 unknown function unknown function 1 20646 20897
NP_877487.1 NC_005045_p49 minor structural protein phrog_7171 minor head protein head and packaging 1 41768 41962
NP_877461.1 NC_005045_p23 hypothetical protein phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 15091 16032
NP_877476.1 NC_005045_p38 virion protein phrog_342 internal virion protein with endolysin domain head and packaging 1 31566 35579
NP_877480.1 NC_005045_p42 hypothetical protein phrog_4950 tail fiber protein tail 1 37839 38231
NP_877477.1 NC_005045_p39 tail fiber protein phrog_6953 tail fiber protein tail 1 35581 36336
NP_877481.1 NC_005045_p43 hypothetical protein phrog_891 terminase small subunit head and packaging 1 38231 38536
NP_877464.1 NC_005045_p26 hypothetical protein phrog_801 dATP / dGTP pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 17515 17883
NP_877470.1 NC_005045_p32 scaffolding protein phrog_1018 head scaffolding protein head and packaging 1 23159 24127
NP_877479.1 NC_005045_p41 tail fiber protein phrog_4176 tail fiber protein tail 1 36766 37644
NP_877460.1 NC_005045_p22 hypothetical protein phrog_862 unknown function unknown function 1 14042 15091
NP_877455.1 NC_005045_p17 hypothetical protein phrog_1614 nucleotidyltransferase DNA, RNA and nucleotide metabolism 1 9361 9978
NP_877459.1 NC_005045_p21 hypothetical protein phrog_5437 unknown function unknown function 1 13674 13985
NP_877448.1 NC_005045_p9 hypothetical protein phrog_4342 unknown function unknown function 1 4281 4574
NP_877449.1 NC_005045_p10 hypothetical protein phrog_5433 unknown function unknown function 1 4653 5072
NP_877486.1 NC_005045_p48 minor structural protein phrog_6908 minor head protein head and packaging 1 41404 41718
NP_877467.1 NC_005045_p29 hypothetical protein phrog_3986 unknown function unknown function 1 20897 21370
NP_877482.1 NC_005045_p44 DNA maturase B phrog_38 terminase large subunit head and packaging 1 38546 40351
NP_877458.1 NC_005045_p20 DNA directed DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 11254 13677
NP_877441.1 NC_005045_p2 hypothetical protein phrog_7124 unknown function unknown function 1 2030 2257
NP_877472.1 NC_005045_p34 tail tubular protein A phrog_446 tail protein tail 1 25284 25838
NP_877442.1 NC_005045_p3 hypothetical protein phrog_1448 unknown function unknown function 1 2268 2801
NP_877474.1 NC_005045_p36 internal virion protein A phrog_805 internal virion protein head and packaging 1 28321 28866
NP_877445.1 NC_005045_p6 hypothetical protein phrog_27649 unknown function unknown function 1 3434 3745
NP_877446.1 NC_005045_p7 hypothetical protein phrog_4342 unknown function unknown function 1 3745 4032
NP_877475.1 NC_005045_p37 structural protein containing C-terminal lysozyme domain phrog_2083 internal virion lysozyme motif head and packaging 1 28866 31562
NP_877447.1 NC_005045_p8 hypothetical protein phrog_4955 unknown function unknown function 1 4029 4265
NP_877456.1 NC_005045_p18 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 9978 10925
NP_877465.1 NC_005045_p27 T3/T7-like RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 18035 20485
NP_877463.1 NC_005045_p25 hypothetical protein phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 16459 17505
NP_877483.1 NC_005045_p45 hypothetical protein phrog_6597 holin lysis 1 40348 40548
NP_877468.1 NC_005045_p30 structural protein phrog_3112 virion structural protein head and packaging 1 21315 21611