| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_005258 |
Definition |
Bacillus phage Bam35c, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Varidnaviria; Bamfordvirae; Preplasmiviricota; Tectiliviricetes; Kalamavirales; Tectiviridae; Betatectivirus. |
DB of origin |
REFSEQ |
Length |
14935 |
Host Name |
Bacillus thuringiensis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
32 |
%GC |
39.71 |
Number of singletons |
2 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_943772.1 | NC_005258_p26 | predicted amidase | phrog_8251 | endolysin | lysis | 1 | 10983 | 11735 |
| NP_943762.1 | NC_005258_p16 | protein 16 | phrog_7771 | unknown function | unknown function | 1 | 7303 | 7443 |
| NP_943761.1 | NC_005258_p15 | protein 15 | phrog_8056 | unknown function | unknown function | 1 | 7146 | 7286 |
| NP_943774.1 | NC_005258_p28 | protein 28 | phrog_9224 | unknown function | unknown function | 1 | 12208 | 13122 |
| NP_943748.1 | NC_005258_p2 | hypothetical protein | phrog_6243 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 550 | 1053 |
| NP_943775.1 | NC_005258_p29 | protein 29 | phrog_10120 | unknown function | unknown function | 1 | 13126 | 14007 |
| NP_943763.1 | NC_005258_p17 | protein 17 | phrog_9939 | unknown function | unknown function | 1 | 7445 | 7699 |
| NP_943776.1 | NC_005258_p30 | protein 30 | phrog_291 | endolysin | lysis | 1 | 14023 | 14820 |
| NP_943757.1 | NC_005258_p11 | protein 11 | phrog_14882 | virion structural protein | head and packaging | 1 | 5389 | 6147 |
| NP_943755.1 | NC_005258_p9 | protein 9 | phrog_21361 | unknown function | unknown function | 1 | 4952 | 5125 |
| NP_943754.1 | NC_005258_p8 | protein 8 | phrog_23030 | unknown function | unknown function | 1 | 4693 | 4833 |
| NP_943769.1 | NC_005258_p23 | protein 23 | phrog_13072 | unknown function | unknown function | 1 | 9932 | 10078 |
| NP_943778.1 | NC_005258_p32 | protein 32 | singleton | unknown function | unknown function | 1 | 14509 | 14820 |
| NP_943768.1 | NC_005258_p22 | protein 22 | phrog_15071 | unknown function | unknown function | 1 | 9759 | 9935 |
| NP_943749.1 | NC_005258_p3 | protein 3 | phrog_9076 | unknown function | unknown function | 1 | 1125 | 1349 |
| NP_943758.1 | NC_005258_p12 | protein 12 | phrog_9100 | unknown function | unknown function | 1 | 5993 | 6235 |
| NP_943751.1 | NC_005258_p5 | DNA polymerase | phrog_1907 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 2129 | 4336 |
| NP_943766.1 | NC_005258_p20 | protein 20 | phrog_4898 | holin | lysis | 1 | 9045 | 9251 |
| NP_943770.1 | NC_005258_p24 | protein 24 | phrog_7846 | unknown function | unknown function | 1 | 10090 | 10365 |
| NP_943747.1 | NC_005258_p1 | protein 1 | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 358 | 534 |
| NP_943750.1 | NC_005258_p4 | protein 4 | phrog_8330 | genome terminal protein | DNA, RNA and nucleotide metabolism | 1 | 1408 | 2145 |
| NP_943759.1 | NC_005258_p13 | protein 13 | phrog_29621 | unknown function | unknown function | 1 | 6204 | 6512 |
| NP_943767.1 | NC_005258_p21 | protein 21 | phrog_9080 | unknown function | unknown function | 1 | 9331 | 9762 |
| NP_943771.1 | NC_005258_p25 | protein 25 | phrog_8814 | unknown function | unknown function | 1 | 10369 | 10983 |
| NP_943753.1 | NC_005258_p7 | protein 7 | phrog_9714 | unknown function | unknown function | 1 | 4566 | 4718 |
| NP_943764.1 | NC_005258_p18 | protein 18 | phrog_5863 | minor head protein | head and packaging | 1 | 7699 | 8769 |
| NP_943777.1 | NC_005258_p31 | protein 31 | singleton | unknown function | unknown function | 1 | 14171 | 14293 |
| NP_943752.1 | NC_005258_p6 | protein 6 | phrog_3502 | unknown function | unknown function | 1 | 4352 | 4552 |
| NP_943773.1 | NC_005258_p27 | protein 27 | phrog_8240 | pentameric base spike protein | tail | 1 | 11683 | 12195 |
| NP_943756.1 | NC_005258_p10 | protein 10 | phrog_8764 | virion structural protein | head and packaging | 1 | 5138 | 5575 |
| NP_943765.1 | NC_005258_p19 | protein 19 | phrog_8076 | unknown function | unknown function | 1 | 8811 | 9041 |
| NP_943760.1 | NC_005258_p14 | protein 14 | phrog_2666 | terminase large subunit | head and packaging | 1 | 6493 | 7131 |