Genomic map of Streptococcus phage EJ-1 (NC_005294)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_005294
Definition
Streptococcus prophage EJ-1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
42935
Host Name
Streptococcus pneumoniae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
73
%GC
39.64
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_945254.1 NC_005294_p15 transcriptional regulator phrog_3 transcriptional repressor transcription regulation 1 8725 8901
NP_945263.1 NC_005294_p24 hypothetical protein phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 12407 12922
NP_945308.1 NC_005294_p69 hypothetical protein phrog_6487 unknown function unknown function 1 39755 40231
NP_945279.1 NC_005294_p40 portal protein phrog_64 portal protein head and packaging 1 20861 22276
NP_945293.1 NC_005294_p54 core tail protein phrog_365 tail protein tail 1 29683 30147
NP_945241.1 NC_005294_p2 hypothetical protein singleton unknown function unknown function -1 1497 1943
NP_945257.1 NC_005294_p18 hypothetical protein phrog_5637 unknown function unknown function 1 9667 9810
NP_945274.1 NC_005294_p35 transcriptional regulator phrog_9969 transcriptional regulator transcription regulation -1 16620 16907
NP_945296.1 NC_005294_p57 hypothetical protein phrog_380 endolysin lysis 1 33023 33715
NP_945243.1 NC_005294_p4 cI repressor phrog_4 transcriptional repressor transcription regulation -1 3529 4332
NP_945305.1 NC_005294_p66 hypothetical protein phrog_33657 unknown function unknown function 1 38299 38724
NP_945292.1 NC_005294_p53 sheath tail protein phrog_279 tail sheath tail 1 28356 29669
NP_945247.1 NC_005294_p8 hypothetical protein phrog_16734 unknown function unknown function 1 5170 5364
NP_945307.1 NC_005294_p68 hypothetical protein phrog_1296 holin lysis 1 39462 39740
NP_945253.1 NC_005294_p14 hypothetical protein phrog_10400 unknown function unknown function 1 8385 8528
NP_945288.1 NC_005294_p49 hypothetical protein phrog_615 head-tail adaptor connector 1 26952 27299
NP_945290.1 NC_005294_p51 hypothetical protein phrog_525 unknown function unknown function 1 27777 28193
NP_945248.1 NC_005294_p9 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism -1 5326 6099
NP_945240.1 NC_005294_p1 integrase phrog_1 integrase integration and excision -1 106 1248
NP_945294.1 NC_005294_p55 hypothetical protein phrog_389 tail protein XkdN-like tail 1 30163 30759
NP_945295.1 NC_005294_p56 tail length tape measure protein phrog_1068 tail length tape measure protein tail 1 30763 33009
NP_945282.1 NC_005294_p43 hypothetical protein phrog_3755 unknown function unknown function 1 24027 24200
NP_945268.1 NC_005294_p29 hypothetical protein phrog_884 unknown function unknown function 1 14190 14450
NP_945275.1 NC_005294_p36 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 16965 17411
NP_945310.1 NC_005294_p71 hypothetical protein phrog_21909 unknown function unknown function 1 40564 41280
NP_945270.1 NC_005294_p31 DNA-binding protein phrog_1992 MazG-like pyrophosphatase other 1 14857 15354
NP_945287.1 NC_005294_p48 hypothetical protein phrog_132 head-tail adaptor connector 1 26550 26945
NP_945297.1 NC_005294_p58 hypothetical protein phrog_400 tail protein tail 1 33712 34680
NP_945284.1 NC_005294_p45 hypothetical protein singleton unknown function unknown function 1 24467 24607
NP_945278.1 NC_005294_p39 terminase, large subunit phrog_2 terminase large subunit head and packaging 1 19591 20856
NP_945309.1 NC_005294_p70 hypothetical protein phrog_4757 unknown function unknown function 1 40238 40558
NP_945271.1 NC_005294_p32 transcriptional regulator phrog_323 transcriptional regulator, D5-like transcription regulation 1 15477 16037
NP_945255.1 NC_005294_p16 excisionase phrog_904 excisionase integration and excision 1 8980 9291
NP_945266.1 NC_005294_p27 hypothetical protein phrog_5513 unknown function unknown function 1 13709 13918
NP_945252.1 NC_005294_p13 hypothetical protein singleton unknown function unknown function 1 8201 8371
NP_945242.1 NC_005294_p3 hypothetical protein phrog_1847 unknown function unknown function -1 1959 3500
NP_945251.1 NC_005294_p12 DnaC protein phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 7392 8204
NP_945256.1 NC_005294_p17 hypothetical protein phrog_1490 lipoprotein other 1 9303 9650
NP_945300.1 NC_005294_p61 tail protein phrog_6 baseplate wedge subunit tail 1 35367 36494
NP_945281.1 NC_005294_p42 hypothetical protein phrog_6332 unknown function unknown function 1 23764 23973
NP_945259.1 NC_005294_p20 hypothetical protein phrog_2553 unknown function unknown function 1 9916 10095
NP_945283.1 NC_005294_p44 hypothetical protein phrog_5469 unknown function unknown function 1 24226 24378
NP_945246.1 NC_005294_p7 hypothetical protein singleton unknown function unknown function 1 5061 5165
NP_945245.1 NC_005294_p6 hypothetical protein phrog_4761 unknown function unknown function 1 4856 4999
NP_945298.1 NC_005294_p59 hypothetical protein phrog_579 unknown function unknown function 1 34680 34982
NP_945286.1 NC_005294_p47 major head protein phrog_247 major head protein head and packaging 1 25542 26534
NP_945249.1 NC_005294_p10 Cro repressor phrog_3 transcriptional repressor transcription regulation 1 6308 6535
NP_945272.1 NC_005294_p33 hypothetical protein phrog_236 nucleotide kinase other 1 16039 16263
NP_945276.1 NC_005294_p37 transferase phrog_498 DNA methyltransferase other 1 17847 19112
NP_945303.1 NC_005294_p64 tail fiber protein phrog_25620 tail collar fiber protein tail 1 37348 37797
NP_945273.1 NC_005294_p34 transcriptional regulator singleton unknown function unknown function -1 16415 16636
NP_945312.1 NC_005294_p73 N-acetylmuramoyl-L-alanine amidase phrog_1110 endolysin lysis 1 41555 42505
NP_945267.1 NC_005294_p28 hypothetical protein phrog_5415 unknown function unknown function 1 13918 14193
NP_945244.1 NC_005294_p5 hypothetical protein phrog_5570 unknown function unknown function 1 4508 4783
NP_945302.1 NC_005294_p63 hypothetical protein phrog_6293 unknown function unknown function 1 37080 37355
NP_945258.1 NC_005294_p19 hypothetical protein phrog_4614 unknown function unknown function 1 9797 9919
NP_945280.1 NC_005294_p41 minor head protein phrog_2494 minor head protein head and packaging 1 22257 23801
NP_945304.1 NC_005294_p65 structural phage protein phrog_27494 virion structural protein head and packaging 1 37802 38290
NP_945262.1 NC_005294_p23 hypothetical protein phrog_1341 unknown function unknown function 1 12078 12410
NP_945311.1 NC_005294_p72 holin phrog_297 holin lysis 1 41296 41553
NP_945260.1 NC_005294_p21 hypothetical protein phrog_148 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 10092 11063
NP_945289.1 NC_005294_p50 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 27296 27787
NP_945285.1 NC_005294_p46 scaffolding protein phrog_194 head scaffolding protein head and packaging 1 24961 25542
NP_945269.1 NC_005294_p30 hypothetical protein phrog_8899 unknown function unknown function 1 14447 14848
NP_945261.1 NC_005294_p22 hypothetical protein phrog_1227 exonuclease DNA, RNA and nucleotide metabolism 1 11067 11903
NP_945277.1 NC_005294_p38 hypothetical protein phrog_2412 unknown function unknown function 1 19142 19603
NP_945264.1 NC_005294_p25 hypothetical protein singleton unknown function unknown function 1 12934 13215
NP_945306.1 NC_005294_p67 hypothetical protein phrog_1554 unknown function unknown function 1 38731 39450
NP_945301.1 NC_005294_p62 hypothetical protein phrog_521 tail protein tail 1 36494 37087
NP_945250.1 NC_005294_p11 DnaD protein phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 6532 7380
NP_945265.1 NC_005294_p26 hypothetical protein phrog_121 unknown function unknown function 1 13223 13708
NP_945299.1 NC_005294_p60 hypothetical protein phrog_120 baseplate wedge subunit tail 1 34985 35377
NP_945291.1 NC_005294_p52 hypothetical protein phrog_966 unknown function unknown function 1 28186 28356