| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_005345 |
Definition |
Streptomyces phage VWB, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
49220 |
Host Name |
Streptomyces venezuelae |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
61 |
%GC |
71.13 |
Number of singletons |
20 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_958280.1 | NC_005345_p39 | ORFp38 | phrog_29 | major head protein | head and packaging | 1 | 28938 | 29984 |
| NP_958295.1 | NC_005345_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 43801 | 44448 |
| NP_958292.1 | NC_005345_p51 | hypothetical protein | singleton | unknown function | unknown function | 1 | 41330 | 41776 |
| NP_958298.1 | NC_005345_p57 | hypothetical protein | phrog_5823 | transcriptional regulator | transcription regulation | 1 | 45737 | 46918 |
| NP_958302.1 | NC_005345_p61 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48807 | 49214 |
| NP_958275.1 | NC_005345_p34 | hypothetical protein | phrog_9 | terminase large subunit | head and packaging | 1 | 23862 | 25472 |
| YP_115515.1 | NC_005345_p1 | integrase | phrog_1 | integrase | integration and excision | -1 | 212 | 1495 |
| NP_958297.1 | NC_005345_p56 | hypothetical protein | singleton | unknown function | unknown function | 1 | 45049 | 45693 |
| NP_958293.1 | NC_005345_p52 | hypothetical protein | phrog_16452 | unknown function | unknown function | 1 | 41791 | 42384 |
| NP_958282.1 | NC_005345_p41 | hypothetical protein | phrog_501 | head closure Hc1 | connector | 1 | 30740 | 31102 |
| NP_958262.1 | NC_005345_p21 | hypothetical protein | phrog_17005 | unknown function | unknown function | -1 | 14989 | 15225 |
| NP_958250.1 | NC_005345_p9 | hypothetical protein | phrog_298 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 5482 | 6318 |
| NP_958255.1 | NC_005345_p14 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 9485 | 9730 |
| NP_958301.1 | NC_005345_p60 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48485 | 48703 |
| NP_958272.1 | NC_005345_p31 | hypothetical protein | phrog_8643 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | 1 | 21946 | 22527 |
| NP_958261.1 | NC_005345_p20 | hypothetical protein | phrog_7575 | unknown function | unknown function | 1 | 14368 | 14988 |
| NP_958258.1 | NC_005345_p17 | hypothetical protein | phrog_8924 | unknown function | unknown function | 1 | 11788 | 12588 |
| NP_958290.1 | NC_005345_p49 | hypothetical protein | phrog_16363 | unknown function | unknown function | 1 | 37757 | 39994 |
| NP_958266.1 | NC_005345_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16326 | 17642 |
| NP_958243.1 | NC_005345_p2 | hypothetical protein | phrog_8 | transcriptional regulator | transcription regulation | -1 | 1931 | 2314 |
| NP_958257.1 | NC_005345_p16 | hypothetical protein | phrog_2447 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 10829 | 11785 |
| NP_958291.1 | NC_005345_p50 | hypothetical protein | phrog_1887 | tail protein | tail | 1 | 39961 | 41082 |
| NP_958252.1 | NC_005345_p11 | hypothetical protein | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 7399 | 8190 |
| NP_958276.1 | NC_005345_p35 | hypothetical protein | phrog_104 | portal protein | head and packaging | 1 | 25621 | 26925 |
| NP_958249.1 | NC_005345_p8 | hypothetical protein | singleton | unknown function | unknown function | 1 | 5273 | 5485 |
| NP_958287.1 | NC_005345_p46 | hypothetical protein | phrog_22068 | unknown function | unknown function | 1 | 32638 | 32988 |
| NP_958278.1 | NC_005345_p37 | hypothetical protein | phrog_4708 | head scaffolding protein | head and packaging | 1 | 27778 | 28515 |
| NP_958271.1 | NC_005345_p30 | hypothetical protein | phrog_23672 | unknown function | unknown function | 1 | 20950 | 21345 |
| NP_958286.1 | NC_005345_p45 | ORFp27 | phrog_117 | major tail protein | tail | 1 | 31971 | 32525 |
| NP_958283.1 | NC_005345_p42 | hypothetical protein | phrog_387 | neck protein | connector | 1 | 31107 | 31379 |
| NP_958267.1 | NC_005345_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17668 | 18918 |
| NP_958251.1 | NC_005345_p10 | hypothetical protein | phrog_16191 | unknown function | unknown function | 1 | 6320 | 7399 |
| NP_958284.1 | NC_005345_p43 | hypothetical protein | phrog_123 | tail terminator | connector | 1 | 31382 | 31777 |
| NP_958270.1 | NC_005345_p29 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20207 | 20491 |
| NP_958246.1 | NC_005345_p5 | hypothetical protein | phrog_17827 | unknown function | unknown function | 1 | 3884 | 4405 |
| NP_958281.1 | NC_005345_p40 | hypothetical protein | phrog_137 | head-tail adaptor Ad1 | connector | 1 | 30342 | 30752 |
| NP_958268.1 | NC_005345_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 18747 | 19508 |
| NP_958244.1 | NC_005345_p3 | hypothetical protein | phrog_14639 | cro-like repressor | transcription regulation | 1 | 2578 | 2892 |
| NP_958263.1 | NC_005345_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 15321 | 15599 |
| NP_958277.1 | NC_005345_p36 | hypothetical protein | phrog_1522 | head maturation protease | head and packaging | 1 | 26918 | 27721 |
| NP_958245.1 | NC_005345_p4 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 2870 | 3103 |
| NP_958274.1 | NC_005345_p33 | hypothetical protein | phrog_226 | minor tail protein | tail | 1 | 23304 | 23783 |
| NP_958273.1 | NC_005345_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22849 | 23304 |
| NP_958296.1 | NC_005345_p55 | hypothetical protein | singleton | unknown function | unknown function | 1 | 44493 | 44801 |
| NP_958265.1 | NC_005345_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16099 | 16254 |
| NP_958299.1 | NC_005345_p58 | hypothetical protein | phrog_30088 | unknown function | unknown function | 1 | 47697 | 48365 |
| NP_958269.1 | NC_005345_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 19682 | 19846 |
| NP_958254.1 | NC_005345_p13 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 8709 | 9485 |
| NP_958259.1 | NC_005345_p18 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13167 | 13667 |
| NP_958285.1 | NC_005345_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31576 | 31971 |
| NP_958294.1 | NC_005345_p53 | hypothetical protein | phrog_29733 | unknown function | unknown function | 1 | 42725 | 43633 |
| NP_958279.1 | NC_005345_p38 | ORFp14 | phrog_3583 | head decoration | head and packaging | 1 | 28534 | 28923 |
| NP_958256.1 | NC_005345_p15 | hypothetical protein | phrog_15058 | unknown function | unknown function | 1 | 10219 | 10662 |
| NP_958253.1 | NC_005345_p12 | hypothetical protein | phrog_22421 | unknown function | unknown function | 1 | 8183 | 8653 |
| NP_958248.1 | NC_005345_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4665 | 5150 |
| NP_958288.1 | NC_005345_p47 | hypothetical protein | singleton | unknown function | unknown function | -1 | 33255 | 33422 |
| NP_958247.1 | NC_005345_p6 | hypothetical protein | phrog_27988 | unknown function | unknown function | 1 | 4402 | 4668 |
| NP_958300.1 | NC_005345_p59 | hypothetical protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 48449 | 48679 |
| NP_958260.1 | NC_005345_p19 | hypothetical protein | singleton | unknown function | unknown function | -1 | 13939 | 14364 |
| NP_958264.1 | NC_005345_p23 | hypothetical protein | phrog_28251 | unknown function | unknown function | 1 | 15770 | 16102 |
| NP_958289.1 | NC_005345_p48 | hypothetical protein | phrog_971 | endolysin | lysis | 1 | 33423 | 37745 |