Genomic map of Streptomyces phage VWB (NC_005345)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_005345
Definition
Streptomyces phage VWB, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
49220
Host Name
Streptomyces venezuelae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
71.13
Number of singletons
20
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
NP_958280.1 NC_005345_p39 ORFp38 phrog_29 major head protein head and packaging 1 28938 29984
NP_958295.1 NC_005345_p54 hypothetical protein singleton unknown function unknown function 1 43801 44448
NP_958292.1 NC_005345_p51 hypothetical protein singleton unknown function unknown function 1 41330 41776
NP_958298.1 NC_005345_p57 hypothetical protein phrog_5823 transcriptional regulator transcription regulation 1 45737 46918
NP_958302.1 NC_005345_p61 hypothetical protein singleton unknown function unknown function 1 48807 49214
NP_958275.1 NC_005345_p34 hypothetical protein phrog_9 terminase large subunit head and packaging 1 23862 25472
YP_115515.1 NC_005345_p1 integrase phrog_1 integrase integration and excision -1 212 1495
NP_958297.1 NC_005345_p56 hypothetical protein singleton unknown function unknown function 1 45049 45693
NP_958293.1 NC_005345_p52 hypothetical protein phrog_16452 unknown function unknown function 1 41791 42384
NP_958282.1 NC_005345_p41 hypothetical protein phrog_501 head closure Hc1 connector 1 30740 31102
NP_958262.1 NC_005345_p21 hypothetical protein phrog_17005 unknown function unknown function -1 14989 15225
NP_958250.1 NC_005345_p9 hypothetical protein phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 5482 6318
NP_958255.1 NC_005345_p14 hypothetical protein phrog_472 WhiB transcriptional factor transcription regulation 1 9485 9730
NP_958301.1 NC_005345_p60 hypothetical protein singleton unknown function unknown function 1 48485 48703
NP_958272.1 NC_005345_p31 hypothetical protein phrog_8643 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 21946 22527
NP_958261.1 NC_005345_p20 hypothetical protein phrog_7575 unknown function unknown function 1 14368 14988
NP_958258.1 NC_005345_p17 hypothetical protein phrog_8924 unknown function unknown function 1 11788 12588
NP_958290.1 NC_005345_p49 hypothetical protein phrog_16363 unknown function unknown function 1 37757 39994
NP_958266.1 NC_005345_p25 hypothetical protein singleton unknown function unknown function 1 16326 17642
NP_958243.1 NC_005345_p2 hypothetical protein phrog_8 transcriptional regulator transcription regulation -1 1931 2314
NP_958257.1 NC_005345_p16 hypothetical protein phrog_2447 replication initiation protein DNA, RNA and nucleotide metabolism 1 10829 11785
NP_958291.1 NC_005345_p50 hypothetical protein phrog_1887 tail protein tail 1 39961 41082
NP_958252.1 NC_005345_p11 hypothetical protein phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 7399 8190
NP_958276.1 NC_005345_p35 hypothetical protein phrog_104 portal protein head and packaging 1 25621 26925
NP_958249.1 NC_005345_p8 hypothetical protein singleton unknown function unknown function 1 5273 5485
NP_958287.1 NC_005345_p46 hypothetical protein phrog_22068 unknown function unknown function 1 32638 32988
NP_958278.1 NC_005345_p37 hypothetical protein phrog_4708 head scaffolding protein head and packaging 1 27778 28515
NP_958271.1 NC_005345_p30 hypothetical protein phrog_23672 unknown function unknown function 1 20950 21345
NP_958286.1 NC_005345_p45 ORFp27 phrog_117 major tail protein tail 1 31971 32525
NP_958283.1 NC_005345_p42 hypothetical protein phrog_387 neck protein connector 1 31107 31379
NP_958267.1 NC_005345_p26 hypothetical protein singleton unknown function unknown function 1 17668 18918
NP_958251.1 NC_005345_p10 hypothetical protein phrog_16191 unknown function unknown function 1 6320 7399
NP_958284.1 NC_005345_p43 hypothetical protein phrog_123 tail terminator connector 1 31382 31777
NP_958270.1 NC_005345_p29 hypothetical protein singleton unknown function unknown function 1 20207 20491
NP_958246.1 NC_005345_p5 hypothetical protein phrog_17827 unknown function unknown function 1 3884 4405
NP_958281.1 NC_005345_p40 hypothetical protein phrog_137 head-tail adaptor Ad1 connector 1 30342 30752
NP_958268.1 NC_005345_p27 hypothetical protein singleton unknown function unknown function 1 18747 19508
NP_958244.1 NC_005345_p3 hypothetical protein phrog_14639 cro-like repressor transcription regulation 1 2578 2892
NP_958263.1 NC_005345_p22 hypothetical protein singleton unknown function unknown function -1 15321 15599
NP_958277.1 NC_005345_p36 hypothetical protein phrog_1522 head maturation protease head and packaging 1 26918 27721
NP_958245.1 NC_005345_p4 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 2870 3103
NP_958274.1 NC_005345_p33 hypothetical protein phrog_226 minor tail protein tail 1 23304 23783
NP_958273.1 NC_005345_p32 hypothetical protein singleton unknown function unknown function 1 22849 23304
NP_958296.1 NC_005345_p55 hypothetical protein singleton unknown function unknown function 1 44493 44801
NP_958265.1 NC_005345_p24 hypothetical protein singleton unknown function unknown function 1 16099 16254
NP_958299.1 NC_005345_p58 hypothetical protein phrog_30088 unknown function unknown function 1 47697 48365
NP_958269.1 NC_005345_p28 hypothetical protein singleton unknown function unknown function 1 19682 19846
NP_958254.1 NC_005345_p13 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 8709 9485
NP_958259.1 NC_005345_p18 hypothetical protein singleton unknown function unknown function 1 13167 13667
NP_958285.1 NC_005345_p44 hypothetical protein singleton unknown function unknown function 1 31576 31971
NP_958294.1 NC_005345_p53 hypothetical protein phrog_29733 unknown function unknown function 1 42725 43633
NP_958279.1 NC_005345_p38 ORFp14 phrog_3583 head decoration head and packaging 1 28534 28923
NP_958256.1 NC_005345_p15 hypothetical protein phrog_15058 unknown function unknown function 1 10219 10662
NP_958253.1 NC_005345_p12 hypothetical protein phrog_22421 unknown function unknown function 1 8183 8653
NP_958248.1 NC_005345_p7 hypothetical protein singleton unknown function unknown function 1 4665 5150
NP_958288.1 NC_005345_p47 hypothetical protein singleton unknown function unknown function -1 33255 33422
NP_958247.1 NC_005345_p6 hypothetical protein phrog_27988 unknown function unknown function 1 4402 4668
NP_958300.1 NC_005345_p59 hypothetical protein phrog_3 transcriptional repressor transcription regulation -1 48449 48679
NP_958260.1 NC_005345_p19 hypothetical protein singleton unknown function unknown function -1 13939 14364
NP_958264.1 NC_005345_p23 hypothetical protein phrog_28251 unknown function unknown function 1 15770 16102
NP_958289.1 NC_005345_p48 hypothetical protein phrog_971 endolysin lysis 1 33423 37745