| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_005356 |
Definition |
Staphylococcus phage 77, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Biseptimavirus. |
DB of origin |
REFSEQ |
Length |
41708 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
69 |
%GC |
33.53 |
Number of singletons |
1 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_958627.1 | NC_005356_p26 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 25357 | 25605 |
| NP_958637.1 | NC_005356_p36 | protein of an unannotated phage | phrog_401 | unknown function | unknown function | 1 | 29304 | 29564 |
| NP_958614.1 | NC_005356_p13 | protein of an unannotated phage | phrog_1963 | unknown function | unknown function | 1 | 8263 | 8424 |
| NP_958665.1 | NC_005356_p64 | protein of an unannotated phage | phrog_152 | RinB-like transcriptional activator | transcription regulation | 1 | 39543 | 39692 |
| NP_958625.1 | NC_005356_p24 | protein of an unannotated phage | phrog_1176 | unknown function | unknown function | -1 | 24060 | 24242 |
| NP_958626.1 | NC_005356_p25 | protein of an unannotated phage | phrog_4 | transcriptional repressor | transcription regulation | -1 | 24441 | 25208 |
| NP_958615.1 | NC_005356_p14 | protein of an unannotated phage | phrog_167 | tail length tape measure protein | tail | 1 | 8481 | 13010 |
| NP_958656.1 | NC_005356_p55 | protein of an unannotated phage | phrog_98 | unknown function | unknown function | 1 | 36876 | 37223 |
| NP_958658.1 | NC_005356_p57 | protein of an unannotated phage | phrog_266 | unknown function | unknown function | 1 | 37521 | 37757 |
| NP_958622.1 | NC_005356_p21 | protein of an unannotated phage | phrog_489 | endolysin | lysis | 1 | 19572 | 21026 |
| NP_958612.1 | NC_005356_p11 | protein of an unannotated phage | phrog_88 | major tail protein | tail | 1 | 6926 | 7570 |
| NP_958620.1 | NC_005356_p19 | protein of an unannotated phage | phrog_276 | unknown function | unknown function | 1 | 18892 | 19122 |
| NP_958618.1 | NC_005356_p17 | protein of an unannotated phage | phrog_1399 | unknown function | unknown function | 1 | 18282 | 18434 |
| NP_958621.1 | NC_005356_p20 | protein of an unannotated phage | phrog_263 | holin | lysis | 1 | 19258 | 19560 |
| NP_958659.1 | NC_005356_p58 | protein of an unannotated phage | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 37762 | 38304 |
| NP_958648.1 | NC_005356_p47 | protein of an unannotated phage | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 34795 | 35199 |
| NP_958633.1 | NC_005356_p32 | protein of an unannotated phage | phrog_63 | anti-repressor Ant | transcription regulation | 1 | 27760 | 28512 |
| NP_958652.1 | NC_005356_p51 | protein of an unannotated phage | phrog_236 | nucleotide kinase | other | 1 | 35753 | 36007 |
| NP_958643.1 | NC_005356_p42 | protein of an unannotated phage | phrog_2232 | unknown function | unknown function | -1 | 31946 | 32803 |
| NP_958613.1 | NC_005356_p12 | protein of an unannotated phage | phrog_187 | head-tail adaptor | connector | 1 | 7886 | 8236 |
| NP_958639.1 | NC_005356_p38 | protein of an unannotated phage | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 29788 | 30576 |
| NP_958628.1 | NC_005356_p27 | protein of an unannotated phage | phrog_21676 | unknown function | unknown function | 1 | 25663 | 25935 |
| NP_958666.1 | NC_005356_p65 | protein of an unannotated phage | phrog_5788 | unknown function | unknown function | 1 | 39692 | 39844 |
| NP_958634.1 | NC_005356_p33 | protein of an unannotated phage | phrog_4309 | unknown function | unknown function | 1 | 28528 | 28746 |
| NP_958670.1 | NC_005356_p69 | protein of an unannotated phage | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41377 | 41676 |
| NP_958661.1 | NC_005356_p60 | protein of an unannotated phage | phrog_1122 | unknown function | unknown function | 1 | 38544 | 38738 |
| NP_958650.1 | NC_005356_p49 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 35390 | 35491 |
| NP_958662.1 | NC_005356_p61 | protein of an unannotated phage | phrog_1616 | unknown function | unknown function | 1 | 38735 | 38938 |
| NP_958642.1 | NC_005356_p41 | protein of an unannotated phage | phrog_10049 | unknown function | unknown function | 1 | 31837 | 31953 |
| NP_958623.1 | NC_005356_p22 | protein of an unannotated phage | phrog_1 | integrase | integration and excision | -1 | 21871 | 23076 |
| NP_958649.1 | NC_005356_p48 | protein of an unannotated phage | phrog_299 | unknown function | unknown function | 1 | 35204 | 35389 |
| NP_958664.1 | NC_005356_p63 | protein of an unannotated phage | phrog_301 | secreted protein | other | 1 | 39160 | 39546 |
| NP_958632.1 | NC_005356_p31 | protein of an unannotated phage | phrog_3505 | unknown function | unknown function | -1 | 27494 | 27703 |
| NP_958611.1 | NC_005356_p10 | protein of an unannotated phage | phrog_78 | tail terminator | connector | 1 | 6518 | 6925 |
| NP_958603.1 | NC_005356_p2 | protein of an unannotated phage | phrog_9 | terminase large subunit | head and packaging | 1 | 443 | 2104 |
| NP_958630.1 | NC_005356_p29 | protein of an unannotated phage | phrog_847 | anti-repressor Ant | transcription regulation | 1 | 26903 | 27346 |
| NP_958631.1 | NC_005356_p30 | protein of an unannotated phage | phrog_1263 | unknown function | unknown function | 1 | 27361 | 27501 |
| NP_958657.1 | NC_005356_p56 | protein of an unannotated phage | phrog_1034 | unknown function | unknown function | 1 | 37220 | 37528 |
| NP_958668.1 | NC_005356_p67 | protein of an unannotated phage | phrog_386 | unknown function | unknown function | 1 | 40498 | 40701 |
| NP_958604.1 | NC_005356_p3 | protein of an unannotated phage | phrog_12 | portal protein | head and packaging | 1 | 2120 | 3307 |
| NP_958646.1 | NC_005356_p45 | protein of an unannotated phage | phrog_809 | transcriptional regulator | transcription regulation | 1 | 34393 | 34551 |
| NP_958616.1 | NC_005356_p15 | protein of an unannotated phage | phrog_202 | distal tail protein Dit | tail | 1 | 13007 | 14491 |
| NP_958653.1 | NC_005356_p52 | protein of an unannotated phage | phrog_258 | virulence associated | other | 1 | 36013 | 36255 |
| NP_958651.1 | NC_005356_p50 | protein of an unannotated phage | phrog_201 | Panton-Valentine leukocicin | DNA, RNA and nucleotide metabolism | 1 | 35454 | 35753 |
| NP_958608.1 | NC_005356_p7 | protein of an unannotated phage | phrog_749 | unknown function | unknown function | 1 | 5490 | 5774 |
| NP_958606.1 | NC_005356_p5 | protein of an unannotated phage | phrog_10 | major head protein | head and packaging | 1 | 4051 | 5196 |
| NP_958602.1 | NC_005356_p1 | protein of an unannotated phage | phrog_1066 | unknown function | unknown function | 1 | 102 | 446 |
| NP_958635.1 | NC_005356_p34 | protein of an unannotated phage | phrog_534 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 28776 | 29039 |
| NP_958638.1 | NC_005356_p37 | protein of an unannotated phage | phrog_946 | unknown function | unknown function | 1 | 29574 | 29795 |
| NP_958655.1 | NC_005356_p54 | protein of an unannotated phage | phrog_467 | unknown function | unknown function | 1 | 36478 | 36879 |
| NP_958663.1 | NC_005356_p62 | protein of an unannotated phage | phrog_555 | unknown function | unknown function | 1 | 38931 | 39167 |
| NP_958640.1 | NC_005356_p39 | protein of an unannotated phage | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 30605 | 31156 |
| NP_958636.1 | NC_005356_p35 | protein of an unannotated phage | phrog_369 | unknown function | unknown function | 1 | 29051 | 29212 |
| NP_958660.1 | NC_005356_p59 | protein of an unannotated phage | phrog_278 | transcriptional regulator | transcription regulation | 1 | 38341 | 38547 |
| NP_958609.1 | NC_005356_p8 | protein of an unannotated phage | phrog_25 | head closure Hc1 | connector | 1 | 5758 | 6120 |
| NP_958645.1 | NC_005356_p44 | protein of an unannotated phage | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 33620 | 34399 |
| NP_958624.1 | NC_005356_p23 | protein of an unannotated phage | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 23269 | 23982 |
| NP_958654.1 | NC_005356_p53 | protein of an unannotated phage | phrog_1241 | unknown function | unknown function | 1 | 36269 | 36475 |
| NP_958610.1 | NC_005356_p9 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6117 | 6521 |
| NP_958669.1 | NC_005356_p68 | protein of an unannotated phage | phrog_36 | transcriptional regulator | transcription regulation | 1 | 40729 | 41145 |
| NP_958647.1 | NC_005356_p46 | protein of an unannotated phage | phrog_433 | unknown function | unknown function | 1 | 34564 | 34785 |
| NP_958605.1 | NC_005356_p4 | protein of an unannotated phage | phrog_94 | head maturation protease | head and packaging | 1 | 3291 | 4028 |
| NP_958667.1 | NC_005356_p66 | protein of an unannotated phage | phrog_5652 | unknown function | unknown function | 1 | 39851 | 40501 |
| NP_958619.1 | NC_005356_p18 | protein of an unannotated phage | phrog_1747 | unknown function | unknown function | 1 | 18481 | 18768 |
| NP_958644.1 | NC_005356_p43 | protein of an unannotated phage | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 32867 | 33610 |
| NP_958607.1 | NC_005356_p6 | protein of an unannotated phage | phrog_390 | Arc-like repressor | transcription regulation | 1 | 5216 | 5500 |
| NP_958629.1 | NC_005356_p28 | protein of an unannotated phage | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 26092 | 26889 |
| NP_958617.1 | NC_005356_p16 | protein of an unannotated phage | phrog_1786 | minor head protein | head and packaging | 1 | 14507 | 18292 |
| NP_958641.1 | NC_005356_p40 | protein of an unannotated phage | phrog_398 | unknown function | unknown function | 1 | 31169 | 31840 |