| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_005357 |
Definition |
Bordetella phage BPP-1, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Rauchvirus. |
DB of origin |
REFSEQ |
Length |
42493 |
Host Name |
Bordetella bronchiseptica |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
49 |
%GC |
65.4 |
Number of singletons |
15 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| NP_958676.1 | NC_005357_p6 | hypothetical protein | phrog_3206 | Avd protein of DGR | DNA, RNA and nucleotide metabolism | -1 | 3021 | 3407 |
| NP_958689.1 | NC_005357_p19 | hypothetical protein | phrog_825 | unknown function | unknown function | -1 | 20751 | 21080 |
| NP_958708.1 | NC_005357_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 35383 | 35553 |
| NP_958710.1 | NC_005357_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 36225 | 36413 |
| NP_958687.1 | NC_005357_p17 | protease | phrog_458 | protease | other | -1 | 19715 | 20404 |
| NP_958698.1 | NC_005357_p28 | Bbp29 | phrog_1156 | DNA primase | DNA, RNA and nucleotide metabolism | -1 | 27177 | 29741 |
| NP_958719.1 | NC_005357_p49 | Bbp50 | phrog_1 | integrase | integration and excision | 1 | 41263 | 42468 |
| NP_958706.1 | NC_005357_p36 | hypothetical protein | phrog_2072 | unknown function | unknown function | 1 | 33702 | 34133 |
| NP_958713.1 | NC_005357_p43 | Bbp44 | phrog_15216 | unknown function | unknown function | 1 | 38828 | 39046 |
| NP_958692.1 | NC_005357_p22 | hypothetical protein | singleton | unknown function | unknown function | -1 | 23173 | 23631 |
| NP_958696.1 | NC_005357_p26 | hypothetical protein | singleton | unknown function | unknown function | -1 | 26337 | 26573 |
| NP_958677.1 | NC_005357_p7 | major tropism determinant | phrog_11262 | tail protein | tail | -1 | 3438 | 4583 |
| NP_958714.1 | NC_005357_p44 | hypothetical protein | phrog_20712 | unknown function | unknown function | 1 | 39043 | 39249 |
| NP_958684.1 | NC_005357_p14 | hypothetical protein | singleton | unknown function | unknown function | -1 | 18009 | 18215 |
| NP_958702.1 | NC_005357_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31511 | 31726 |
| NP_958697.1 | NC_005357_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26809 | 27165 |
| NP_958701.1 | NC_005357_p31 | repressor protein cI | phrog_4 | transcriptional repressor | transcription regulation | 1 | 30843 | 31514 |
| NP_958688.1 | NC_005357_p18 | Bbp19 | phrog_528 | unknown function | unknown function | -1 | 20361 | 20708 |
| NP_958715.1 | NC_005357_p45 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39246 | 39470 |
| NP_958686.1 | NC_005357_p16 | major capsid protein | phrog_212 | major head protein | head and packaging | -1 | 18706 | 19701 |
| NP_958718.1 | NC_005357_p48 | Bbp49 | phrog_539 | excisionase | integration and excision | 1 | 41078 | 41287 |
| NP_958703.1 | NC_005357_p33 | hypothetical protein | singleton | unknown function | unknown function | 1 | 31858 | 32289 |
| NP_958694.1 | NC_005357_p24 | Bbp25 | phrog_2 | terminase large subunit | head and packaging | -1 | 24136 | 25737 |
| NP_958691.1 | NC_005357_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 22762 | 23169 |
| NP_958679.1 | NC_005357_p9 | crystallin beta/gamma motif-containing protein | phrog_9880 | unknown function | unknown function | -1 | 6187 | 12345 |
| NP_958709.1 | NC_005357_p39 | Bbp40 | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 35559 | 36107 |
| NP_958712.1 | NC_005357_p42 | Bbp43 | phrog_93 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 38568 | 38831 |
| NP_958674.1 | NC_005357_p4 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1527 | 1775 |
| NP_958678.1 | NC_005357_p8 | hypothetical protein | singleton | unknown function | unknown function | -1 | 4599 | 6125 |
| NP_958700.1 | NC_005357_p30 | Cro-like protein | phrog_6831 | transcriptional regulator | transcription regulation | -1 | 30510 | 30758 |
| NP_958673.1 | NC_005357_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1266 | 1517 |
| NP_958675.1 | NC_005357_p5 | reverse transcriptase | phrog_1423 | Reverse transcriptase | DNA, RNA and nucleotide metabolism | -1 | 1756 | 2742 |
| NP_958693.1 | NC_005357_p23 | acetyltransferase domain containing protein | phrog_1249 | acetyltransferase | other | -1 | 23628 | 24092 |
| NP_958707.1 | NC_005357_p37 | Bbp38 | phrog_69 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 34130 | 35386 |
| NP_958695.1 | NC_005357_p25 | Bbp26 | phrog_1482 | terminase small subunit | head and packaging | -1 | 25734 | 26318 |
| NP_958716.1 | NC_005357_p46 | Bbp47 | phrog_62 | DNA helicase | DNA, RNA and nucleotide metabolism | 1 | 39467 | 40861 |
| NP_958704.1 | NC_005357_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 32295 | 32771 |
| NP_958699.1 | NC_005357_p29 | adenine DNA methyltransferase | phrog_67 | DNA methyltransferase | other | -1 | 29758 | 30513 |
| NP_958683.1 | NC_005357_p13 | hypothetical protein | phrog_394 | tail protein | tail | -1 | 17262 | 17933 |
| NP_958711.1 | NC_005357_p41 | Bbp42 | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 36413 | 38479 |
| NP_958681.1 | NC_005357_p11 | hypothetical protein | singleton | unknown function | unknown function | -1 | 14510 | 15205 |
| NP_958671.1 | NC_005357_p1 | Bbp1 | phrog_1544 | unknown function | unknown function | -1 | 140 | 772 |
| NP_958680.1 | NC_005357_p10 | lysin | phrog_10475 | endolysin | lysis | -1 | 12342 | 14504 |
| NP_958682.1 | NC_005357_p12 | hypothetical protein | phrog_376 | tail protein | tail | -1 | 15217 | 17262 |
| NP_958717.1 | NC_005357_p47 | Bbp48 | phrog_236 | nucleotide kinase | other | 1 | 40858 | 41085 |
| NP_958690.1 | NC_005357_p20 | hypothetical protein | phrog_332 | head-tail adaptor | connector | -1 | 21093 | 22760 |
| NP_958685.1 | NC_005357_p15 | hypothetical protein | phrog_427 | unknown function | unknown function | -1 | 18228 | 18650 |
| NP_958672.1 | NC_005357_p2 | Bbp2 | phrog_315 | endolysin | lysis | -1 | 773 | 1264 |
| NP_958705.1 | NC_005357_p35 | Bbp36 | phrog_18079 | unknown function | unknown function | 1 | 32776 | 33705 |