Genomic map of Escherichia virus T5 (NC_005859)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_005859
Definition
Enterobacteria phage T5, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Demerecviridae; Markadamsvirinae; Tequintavirus.
DB of origin
REFSEQ
Length
121750
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
162
%GC
39.26
Number of singletons
5
Number of paralogs
10

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_006873.1 NC_005859_p45 hypothetical protein phrog_739 Rz-like spanin lysis -1 22802 23245
YP_006922.1 NC_005859_p94 aerobic ribonucleoside diphosphate reductase, small subunit phrog_86 ribonucleoside diphosphate reductase small subunit DNA, RNA and nucleotide metabolism -1 48391 49536
YP_006911.1 NC_005859_p83 hypothetical protein phrog_938 endolysin lysis -1 42290 42739
YP_006875.1 NC_005859_p47 hypothetical protein phrog_4243 unknown function unknown function -1 23739 24437
YP_006916.1 NC_005859_p88 hypothetical protein phrog_4586 unknown function unknown function -1 45179 45415
YP_006881.1 NC_005859_p53 hypothetical protein phrog_2855 unknown function unknown function -1 26436 26717
YP_006953.1 NC_005859_p125 hypothetical protein phrog_4258 unknown function unknown function 1 75724 76008
YP_006977.1 NC_005859_p149 major head protein precursor phrog_10 major head protein head and packaging -1 101608 102984
YP_006986.1 NC_005859_p158 lytic conversion lipoprotein precursor phrog_1119 Cor superinfection exclusion protein moron, auxiliary metabolic gene and host takeover 1 110429 110662
YP_006928.1 NC_005859_p100 hypothetical protein phrog_11748 unknown function unknown function 1 55786 56166
YP_006841.1 NC_005859_p13 hypothetical protein phrog_5607 unknown function unknown function 1 7904 8083
YP_006939.1 NC_005859_p111 D2 protein phrog_3611 helicase DNA, RNA and nucleotide metabolism 1 63122 63826
YP_006895.1 NC_005859_p67 hypothetical protein phrog_3972 unknown function unknown function -1 33205 33552
YP_006956.1 NC_005859_p128 recombination endonuclease, subunit D13 phrog_77 SbcC-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 77769 79607
YP_006983.1 NC_005859_p155 terminase, large subunit phrog_2 terminase large subunit head and packaging -1 106618 107934
YP_006856.1 NC_005859_p28 hypothetical protein phrog_4731 unknown function unknown function -1 14984 15310
YP_006890.1 NC_005859_p62 hypothetical protein phrog_2210 unknown function unknown function -1 29980 30180
YP_006846.1 NC_005859_p18 hypothetical protein phrog_8583 unknown function unknown function -1 10936 11820
YP_006905.1 NC_005859_p77 hypothetical protein phrog_8119 unknown function unknown function 1 38064 39029
YP_006984.1 NC_005859_p156 hypothetical protein phrog_3802 terminase small subunit head and packaging -1 107934 108416
YP_006907.1 NC_005859_p79 hypothetical protein singleton unknown function unknown function 1 39477 39671
YP_006918.1 NC_005859_p90 hypothetical protein phrog_4593 unknown function unknown function -1 46057 46335
YP_006883.1 NC_005859_p55 hypothetical protein phrog_4499 unknown function unknown function -1 27263 27574
YP_006839.1 NC_005859_p11 hypothetical protein phrog_4263 unknown function unknown function 1 6495 7505
YP_006957.1 NC_005859_p129 D14 protein phrog_244 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 79611 80093
YP_006866.1 NC_005859_p38 hypothetical protein phrog_4328 unknown function unknown function -1 18929 19360
YP_006949.1 NC_005859_p121 DNA replication primase phrog_47 DNA primase DNA, RNA and nucleotide metabolism 1 70144 71034
YP_006879.1 NC_005859_p51 H-N-H-endonuclease F-TflV phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 25638 26150
YP_006963.1 NC_005859_p135 hypothetical protein phrog_1084 unknown function unknown function -1 86055 86318
YP_006933.1 NC_005859_p105 hypothetical protein phrog_1818 unknown function unknown function 1 57588 58094
YP_006973.1 NC_005859_p145 major tail protein phrog_3575 major tail protein tail -1 98359 99753
YP_006981.1 NC_005859_p153 hypothetical protein phrog_3497 unknown function unknown function -1 105346 105783
YP_006940.1 NC_005859_p112 hypothetical protein phrog_643 transcriptional regulator transcription regulation 1 63819 64070
YP_006836.1 NC_005859_p8 hypothetical protein phrog_4718 unknown function unknown function -1 4715 4918
YP_006926.1 NC_005859_p98 PhoH-like protein phrog_170 PhoH-like phosphate starvation-inducible other -1 52838 53590
YP_006934.1 NC_005859_p106 hypothetical protein phrog_2502 unknown function unknown function 1 58097 58525
YP_006899.1 NC_005859_p71 hypothetical protein phrog_5876 unknown function unknown function -1 34806 35078
YP_006919.1 NC_005859_p91 RNaseH ribonuclease phrog_531 Rnase H DNA, RNA and nucleotide metabolism -1 46412 46888
YP_006850.1 NC_005859_p22 hypothetical protein phrog_9887 unknown function unknown function -1 12916 13206
YP_006979.1 NC_005859_p151 tail protein phrog_2973 Hoc-like head decoration head and packaging -1 103638 104132
YP_006917.1 NC_005859_p89 hypothetical protein phrog_4516 unknown function unknown function -1 45458 45973
YP_006863.1 NC_005859_p35 serine/threonine protein phosphatase phrog_246 NinI-like serine-threonine phosphatase other -1 17437 18300
YP_006869.1 NC_005859_p41 holin phrog_860 holin lysis -1 20341 20997
YP_006829.1 NC_005859_p1 deoxynucleoside-5'-monophosphatase phrog_415 polynucleotide kinase other -1 124 858
YP_006889.1 NC_005859_p61 H-N-H endonuclease F-TflII phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 29397 29978
YP_006935.1 NC_005859_p107 hypothetical protein phrog_2502 unknown function unknown function 1 58535 58927
YP_006959.1 NC_005859_p131 deoxyUTP pyrophosphatase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 80965 81411
YP_006946.1 NC_005859_p118 D5 protein phrog_323 transcriptional regulator, D5-like transcription regulation 1 67310 68077
YP_006896.1 NC_005859_p68 hypothetical protein phrog_5473 unknown function unknown function -1 33664 33849
YP_006835.1 NC_005859_p7 hypothetical protein phrog_3747 unknown function unknown function -1 4230 4481
YP_006927.1 NC_005859_p99 anaerobic ribonucleoside-triphosphate reductase phrog_487 NrdD-like anaerobic ribonucleotide reductase large subunit moron, auxiliary metabolic gene and host takeover 1 53961 55685
YP_006929.1 NC_005859_p101 hypothetical protein phrog_5236 unknown function unknown function 1 56159 56392
YP_006941.1 NC_005859_p113 D3 protein phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism 1 64174 64584
YP_006930.1 NC_005859_p102 Sir2-like protein phrog_2162 Sir2 (NAD-dependent deacetylase) DNA, RNA and nucleotide metabolism 1 56447 57265
YP_006893.1 NC_005859_p65 hypothetical protein phrog_6221 unknown function unknown function -1 32240 32407
YP_006834.1 NC_005859_p6 A2 phrog_1725 DNA binding protein DNA, RNA and nucleotide metabolism -1 3727 4134
YP_006884.1 NC_005859_p56 acetyltransferase-related protein phrog_1209 unknown function unknown function -1 27656 28024
YP_006831.1 NC_005859_p3 hypothetical protein phrog_23906 unknown function unknown function -1 1371 1649
YP_006980.1 NC_005859_p152 portal protein phrog_12 portal protein head and packaging -1 104135 105346
YP_006852.1 NC_005859_p24 hypothetical protein phrog_6933 unknown function unknown function -1 13647 13850
YP_006912.1 NC_005859_p84 hypothetical protein phrog_1479 unknown function unknown function -1 42745 43062
YP_006990.1 NC_005859_p162 hypothetical protein phrog_6447 membrane protein moron, auxiliary metabolic gene and host takeover 1 111245 111490
YP_006903.1 NC_005859_p75 H-N-H endonuclease TflIV phrog_14736 HNH endonuclease DNA, RNA and nucleotide metabolism -1 36379 37062
YP_006967.1 NC_005859_p139 hypothetical protein phrog_1302 distal tail protein tail -1 91397 92011
YP_006904.1 NC_005859_p76 hypothetical protein phrog_849 DNA primase DNA, RNA and nucleotide metabolism -1 37279 37797
YP_006914.1 NC_005859_p86 hypothetical protein phrog_5252 unknown function unknown function -1 44196 44378
YP_006969.1 NC_005859_p141 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 95777 96529
YP_006932.1 NC_005859_p104 hypothetical protein phrog_5116 unknown function unknown function 1 57419 57601
YP_006900.1 NC_005859_p72 hypothetical protein phrog_4551 unknown function unknown function -1 35617 35892
YP_006887.1 NC_005859_p59 hypothetical protein phrog_5919 unknown function unknown function -1 28752 28916
YP_006906.1 NC_005859_p78 hypothetical protein phrog_7894 unknown function unknown function 1 39051 39467
YP_006964.1 NC_005859_p136 hypothetical protein phrog_34807 collar tail protein for L-shaped tail fibre attachment tail -1 86294 86479
YP_006970.1 NC_005859_p142 hypothetical protein phrog_3914 tail assembly chaperone tail -1 96624 96992
YP_006867.1 NC_005859_p39 hypothetical protein phrog_5944 unknown function unknown function -1 19436 19852
YP_006931.1 NC_005859_p103 hypothetical protein phrog_5116 unknown function unknown function 1 57243 57428
YP_006858.1 NC_005859_p30 hypothetical protein phrog_4984 unknown function unknown function -1 15542 15823
YP_006832.1 NC_005859_p4 A1 phrog_1745 DNA transfer protein other -1 1706 3376
YP_006830.1 NC_005859_p2 hypothetical protein phrog_4576 unknown function unknown function -1 939 1334
YP_006840.1 NC_005859_p12 hypothetical protein phrog_5145 unknown function unknown function 1 7624 7854
YP_006938.1 NC_005859_p110 hypothetical protein phrog_5291 unknown function unknown function 1 62820 63053
YP_006871.1 NC_005859_p43 deoxynucleoside-5'-monophosphate kinase phrog_139 deoxynucleoside monophosphate kinase other -1 21766 22518
YP_006857.1 NC_005859_p29 hypothetical protein phrog_4804 unknown function unknown function -1 15300 15545
YP_006915.1 NC_005859_p87 metallopeptidase phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 44449 45150
YP_006976.1 NC_005859_p148 hypothetical protein phrog_442 head-tail adaptor connector -1 101036 101548
YP_006844.1 NC_005859_p16 hypothetical protein singleton unknown function unknown function 1 8681 8938
YP_006945.1 NC_005859_p117 NAD-dependent DNA ligase, subunit B phrog_3498 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 66538 67317
YP_006901.1 NC_005859_p73 hypothetical protein phrog_5153 unknown function unknown function -1 35983 36189
YP_006855.1 NC_005859_p27 hypothetical protein phrog_5967 unknown function unknown function -1 14684 14884
YP_006872.1 NC_005859_p44 hypothetical protein phrog_812 Rz-like spanin lysis -1 22518 22871
YP_006924.1 NC_005859_p96 aerobic ribonucleoside diphosphate reductase, large subunit phrog_84 ribonucleoside-diphosphate reductase large subunit DNA, RNA and nucleotide metabolism -1 50163 52598
YP_006897.1 NC_005859_p69 hypothetical protein phrog_5032 unknown function unknown function -1 34006 34524
YP_006842.1 NC_005859_p14 hypothetical protein phrog_4227 endonuclease nicking abasic sites generated by host uracil glycosylase Ung moron, auxiliary metabolic gene and host takeover 1 8086 8298
YP_006894.1 NC_005859_p66 hypothetical protein phrog_18174 unknown function unknown function -1 32593 32751
YP_006874.1 NC_005859_p46 H-N-H-endonuclease F-TflVI phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 23245 23742
YP_006978.1 NC_005859_p150 prohead protease phrog_80 head maturation protease head and packaging -1 103002 103634
YP_006882.1 NC_005859_p54 hypothetical protein phrog_5021 unknown function unknown function -1 26794 27141
YP_006861.1 NC_005859_p33 hypothetical protein phrog_4979 unknown function unknown function -1 16317 16748
YP_006920.1 NC_005859_p92 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 47022 47861
YP_006847.1 NC_005859_p19 hypothetical protein phrog_5271 unknown function unknown function -1 11902 12510
YP_006943.1 NC_005859_p115 hypothetical protein phrog_4053 transcriptional regulator transcription regulation 1 64968 65276
YP_006944.1 NC_005859_p116 NAD-dependent DNA ligase, subunit A phrog_3359 NAD-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 65364 66335
YP_006968.1 NC_005859_p140 pore-forming tail tip protein phrog_3779 tail length tape measure protein tail -1 92121 95780
YP_006962.1 NC_005859_p134 hypothetical protein singleton unknown function unknown function 1 81955 82326
YP_006989.1 NC_005859_p161 hypothetical protein phrog_5851 unknown function unknown function 1 111058 111252
YP_006870.1 NC_005859_p42 ATP-dependent Clp protease phrog_1827 ATP-dependent protease other -1 21154 21753
YP_006908.1 NC_005859_p80 hypothetical protein phrog_200 lipoprotein other -1 39791 40738
YP_006982.1 NC_005859_p154 hypothetical protein phrog_681 endonuclease DNA, RNA and nucleotide metabolism -1 105773 106606
YP_006925.1 NC_005859_p97 hypothetical protein singleton unknown function unknown function -1 52678 52836
YP_006885.1 NC_005859_p57 hypothetical protein phrog_17200 unknown function unknown function -1 28108 28191
YP_006877.1 NC_005859_p49 hypothetical protein phrog_5265 unknown function unknown function -1 25047 25331
YP_006966.1 NC_005859_p138 tail protein Pb3 phrog_31 central tail fiber J tail -1 88551 91400
YP_006952.1 NC_005859_p124 ATP-dependent helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 74151 75503
YP_006988.1 NC_005859_p160 hypothetical protein phrog_6369 unknown function unknown function 1 110954 111061
YP_006862.1 NC_005859_p34 serine/threonine protein phosphatase phrog_547 phosphoesterase other -1 16916 17437
YP_006951.1 NC_005859_p123 hypothetical protein phrog_4386 unknown function unknown function 1 73657 74154
YP_006950.1 NC_005859_p122 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 71097 73664
YP_006860.1 NC_005859_p32 hypothetical protein phrog_3880 unknown function unknown function -1 15987 16238
YP_006971.1 NC_005859_p143 hypothetical protein phrog_313 Tail assembly chaperone tail -1 97054 97458
YP_006868.1 NC_005859_p40 lysozyme phrog_465 endolysin lysis -1 19931 20344
YP_006876.1 NC_005859_p48 hypothetical protein phrog_5468 unknown function unknown function -1 24592 24936
YP_006837.1 NC_005859_p9 hypothetical protein singleton unknown function unknown function -1 4915 5022
YP_006948.1 NC_005859_p120 H-N-H-endonuclease P-TflX phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 69614 70147
YP_006960.1 NC_005859_p132 hypothetical protein phrog_5592 unknown function unknown function 1 81374 81637
YP_006954.1 NC_005859_p126 D11 protein phrog_1607 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 76001 76774
YP_006878.1 NC_005859_p50 hypothetical protein phrog_5792 unknown function unknown function -1 25328 25624
YP_006913.1 NC_005859_p85 hypothetical protein phrog_1491 tail fiber protein tail -1 43505 44143
YP_006975.1 NC_005859_p147 hypothetical protein phrog_3725 tail completion or Neck1 protein connector -1 100269 101036
YP_006848.1 NC_005859_p20 hypothetical protein phrog_5799 unknown function unknown function -1 12510 12695
YP_006833.1 NC_005859_p5 hypothetical protein phrog_4820 membrane protein moron, auxiliary metabolic gene and host takeover -1 3473 3670
YP_006838.1 NC_005859_p10 H-N-H-endonuclease P-TflVII phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 5411 5929
YP_006961.1 NC_005859_p133 L-shaped tail fiber protein phrog_24369 tail fiber protein tail -1 81865 86055
YP_006843.1 NC_005859_p15 hypothetical protein phrog_4379 unknown function unknown function 1 8300 8644
YP_006886.1 NC_005859_p58 hypothetical protein phrog_4760 unknown function unknown function -1 28302 28592
YP_006942.1 NC_005859_p114 hypothetical protein phrog_3696 unknown function unknown function 1 64621 64917
YP_006898.1 NC_005859_p70 hypothetical protein phrog_34563 unknown function unknown function -1 34627 34755
YP_006921.1 NC_005859_p93 dihydrofolate reductase phrog_316 dihydrofolate reductase DNA, RNA and nucleotide metabolism -1 47861 48394
YP_006864.1 NC_005859_p36 hypothetical protein phrog_7354 major head protein head and packaging -1 18303 18548
YP_006947.1 NC_005859_p119 D6 protein phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 68109 69617
YP_006985.1 NC_005859_p157 receptor-binding tail protein phrog_4815 receptor binding tail protein tail -1 108427 110349
YP_006965.1 NC_005859_p137 tail protein Pb4 phrog_3890 straight fibre tail protein tail -1 86484 88550
YP_006958.1 NC_005859_p130 flap endonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 80093 80968
YP_006902.1 NC_005859_p74 hypothetical protein phrog_7716 unknown function unknown function -1 36182 36349
YP_006845.1 NC_005859_p17 hypothetical protein phrog_6973 unknown function unknown function 1 8954 9157
YP_006849.1 NC_005859_p21 hypothetical protein phrog_6021 unknown function unknown function -1 12695 12928
YP_006880.1 NC_005859_p52 hypothetical protein phrog_4821 unknown function unknown function -1 26147 26443
YP_006936.1 NC_005859_p108 replication origin binding protein phrog_3712 replication origin binding DNA, RNA and nucleotide metabolism 1 59545 62331
YP_006955.1 NC_005859_p127 recombination endonuclease, subunit D12 phrog_100 SbcD-like subunit of palindrome specific endonuclease DNA, RNA and nucleotide metabolism 1 76811 77788
YP_006987.1 NC_005859_p159 hypothetical protein phrog_8596 unknown function unknown function 1 110826 110954
YP_006923.1 NC_005859_p95 H-N-H-endonuclease P-TflVIII phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism -1 49536 50060
YP_006854.1 NC_005859_p26 hypothetical protein phrog_4215 unknown function unknown function -1 14226 14687
YP_006851.1 NC_005859_p23 hypothetical protein phrog_4605 unknown function unknown function -1 13199 13645
YP_006909.1 NC_005859_p81 hypothetical protein phrog_1460 tRNA amidotransferase DNA, RNA and nucleotide metabolism -1 41617 42051
YP_006859.1 NC_005859_p31 hypothetical protein phrog_29567 unknown function unknown function -1 15823 15987
YP_006891.1 NC_005859_p63 hypothetical protein phrog_16298 unknown function unknown function -1 30651 30824
YP_006972.1 NC_005859_p144 tail protein phrog_3889 base plate tail tube protein tail -1 97458 98354
YP_006853.1 NC_005859_p25 hypothetical protein phrog_4905 unknown function unknown function -1 13907 14278
YP_006910.1 NC_005859_p82 hypothetical protein phrog_5077 unknown function unknown function -1 42051 42221
YP_006937.1 NC_005859_p109 H-N-H-endonuclease P-TflIX phrog_99 HNH endonuclease DNA, RNA and nucleotide metabolism 1 62318 62836
YP_006865.1 NC_005859_p37 thioredoxin phrog_22 thioredoxin domain DNA, RNA and nucleotide metabolism -1 18646 18936
YP_006974.1 NC_005859_p146 hypothetical protein phrog_3907 tail terminator connector -1 99780 100265
YP_006892.1 NC_005859_p64 H-N-H endonuclease TflI phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 31022 31606
YP_006888.1 NC_005859_p60 hypothetical protein phrog_5598 unknown function unknown function -1 28909 29160