| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_005882 |
Definition |
Burkholderia cenocepacia phage BcepMu, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Bcepmuvirus. |
DB of origin |
REFSEQ |
Length |
36748 |
Host Name |
Burkholderia cenocepacia |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
62.86 |
Number of singletons |
4 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_024712.1 | NC_005882_p39 | P2 major tail sheath protein F1 | phrog_23 | tail sheath | tail | 1 | 22520 | 23953 |
| YP_024696.1 | NC_005882_p23 | Rz | phrog_1403 | Rz-like spanin | lysis | 1 | 12513 | 13112 |
| YP_024713.1 | NC_005882_p40 | P2 major tail tube protein FII | phrog_55 | head closure | connector | 1 | 23956 | 24480 |
| YP_024689.1 | NC_005882_p16 | hypothetical protein | phrog_925 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 8856 | 9098 |
| YP_024687.1 | NC_005882_p14 | novel protein supported by by IST data | phrog_25550 | unknown function | unknown function | 1 | 8571 | 8807 |
| YP_024707.1 | NC_005882_p34 | hypothetical protein | phrog_1005 | major head protein | head and packaging | 1 | 20026 | 20949 |
| YP_024675.1 | NC_005882_p2 | MugemA | phrog_286 | unknown function | unknown function | -1 | 733 | 1173 |
| YP_024725.1 | NC_005882_p52 | P2tail fiber protein | phrog_11518 | tail fiber protein | tail | 1 | 32898 | 35255 |
| YP_024720.1 | NC_005882_p47 | similar to P2regulatory protein | phrog_52 | tail protein | tail | 1 | 28965 | 30170 |
| YP_024693.1 | NC_005882_p20 | hypothetical protein | phrog_21839 | unknown function | unknown function | 1 | 11264 | 11488 |
| YP_024679.1 | NC_005882_p6 | conserved protein | phrog_5658 | pyrophosphatase | other | -1 | 2668 | 3105 |
| YP_024705.1 | NC_005882_p32 | conserved protein supported by IST data | phrog_976 | head maturation protease | head and packaging | 1 | 18850 | 19980 |
| YP_024699.1 | NC_005882_p26 | hypothetical protein | phrog_436 | unknown function | unknown function | 1 | 13444 | 13776 |
| YP_024701.1 | NC_005882_p28 | Mu portal protein gp28TerL | phrog_2 | terminase large subunit | head and packaging | 1 | 14320 | 15822 |
| YP_024702.1 | NC_005882_p29 | Mu gp29 | phrog_113 | portal protein | head and packaging | 1 | 15819 | 17294 |
| YP_024719.1 | NC_005882_p46 | tail protein | phrog_46 | baseplate hub | tail | 1 | 28768 | 28977 |
| YP_024704.1 | NC_005882_p31 | Mu G virion morphogenesis protein | phrog_26 | tail completion or Neck1 protein | connector | 1 | 18120 | 18647 |
| YP_024681.1 | NC_005882_p8 | exe/ eha type II secretion pathway subunit | phrog_296 | DNA transposition protein | integration and excision | -1 | 3457 | 4671 |
| YP_024714.1 | NC_005882_p41 | conserved protein supported by IST data | phrog_166 | tail protein | tail | 1 | 24602 | 24931 |
| YP_024691.1 | NC_005882_p18 | hypothetical protein | phrog_6521 | membrane protein | moron, auxiliary metabolic gene and host takeover | 1 | 9639 | 10421 |
| YP_024677.1 | NC_005882_p4 | HU DNA binding protein | phrog_379 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 1592 | 1864 |
| YP_024708.1 | NC_005882_p35 | hypothetical protein | phrog_673 | head scaffolding protein | head and packaging | 1 | 21024 | 21356 |
| YP_024722.1 | NC_005882_p49 | P2base plate assembly protein | phrog_43 | baseplate wedge subunit | tail | 1 | 30823 | 31176 |
| YP_024695.1 | NC_005882_p22 | soluble lytic murein transglycosylase | phrog_669 | endolysin | lysis | 1 | 11905 | 12516 |
| YP_024692.1 | NC_005882_p19 | hypothetical protein | phrog_11791 | unknown function | unknown function | 1 | 10663 | 11199 |
| YP_024724.1 | NC_005882_p51 | P2tail fiber protein | phrog_48 | tail protein | tail | 1 | 32317 | 32898 |
| YP_024711.1 | NC_005882_p38 | hypothetical protein | phrog_895 | unknown function | unknown function | 1 | 22271 | 22516 |
| YP_024690.1 | NC_005882_p17 | cro/cI repressor transcription regulator | phrog_8 | transcriptional regulator | transcription regulation | 1 | 9226 | 9642 |
| YP_024726.1 | NC_005882_p53 | acyltransferase | phrog_3333 | O-acetyltransferase | other | -1 | 35456 | 36589 |
| YP_024717.1 | NC_005882_p44 | similar to P2tail protein | phrog_28 | tail length tape measure protein | tail | 1 | 25336 | 27876 |
| YP_024723.1 | NC_005882_p50 | P2baseplate assembly protein | phrog_6 | baseplate wedge subunit | tail | 1 | 31173 | 32324 |
| YP_024694.1 | NC_005882_p21 | holin | phrog_1528 | holin | lysis | 1 | 11555 | 11902 |
| YP_024686.1 | NC_005882_p13 | hypothetical protein | phrog_101 | CII-like transcriptional activator | transcription regulation | -1 | 7971 | 8450 |
| YP_024676.1 | NC_005882_p3 | single-stranded DNA binding protein | phrog_646 | unknown function | unknown function | -1 | 1157 | 1561 |
| YP_024703.1 | NC_005882_p30 | similar to Mu F virion morphogenesis protein | phrog_220 | minor head protein and DNA pilot | head and packaging | 1 | 17287 | 18123 |
| YP_024678.1 | NC_005882_p5 | conserved protein | phrog_846 | unknown function | unknown function | -1 | 1928 | 2545 |
| YP_024684.1 | NC_005882_p11 | hypothetical protein | phrog_29166 | unknown function | unknown function | -1 | 7449 | 7661 |
| YP_024715.1 | NC_005882_p42 | Probable Lambda G-pre-tape measure frameshift protein | phrog_8286 | unknown function | unknown function | 1 | 24858 | 25061 |
| YP_024680.1 | NC_005882_p7 | hypothetical protein | phrog_2043 | unknown function | unknown function | -1 | 3126 | 3455 |
| YP_024698.1 | NC_005882_p25 | inner membrane protein | phrog_462 | lipoprotein | other | 1 | 13109 | 13447 |
| YP_024688.1 | NC_005882_p15 | novel reading frame identified by IST data | singleton | unknown function | unknown function | -1 | 8638 | 8970 |
| YP_024716.1 | NC_005882_p43 | alternative gene42 C-termninus produced by ribosomal slippage | singleton | unknown function | unknown function | 1 | 24977 | 25363 |
| YP_024721.1 | NC_005882_p48 | P2base plate assembly protein | phrog_11 | baseplate spike | tail | 1 | 30167 | 30769 |
| YP_024718.1 | NC_005882_p45 | P2protein | phrog_788 | tail protein | tail | 1 | 27878 | 28768 |
| YP_024697.1 | NC_005882_p24 | Rz1, out of frame, embedded proline-rich protein | singleton | unknown function | unknown function | 1 | 12820 | 13074 |
| YP_024709.1 | NC_005882_p36 | similar to Mu gp36 | phrog_195 | head-tail adaptor | connector | 1 | 21358 | 21810 |
| YP_024683.1 | NC_005882_p10 | conserved protein | phrog_1748 | unknown function | unknown function | -1 | 6485 | 7438 |
| YP_024700.1 | NC_005882_p27 | TerS | phrog_426 | terminase small subunit | head and packaging | 1 | 13778 | 14323 |
| YP_024685.1 | NC_005882_p12 | conserved protein | phrog_1368 | transcriptional regulator | transcription regulation | -1 | 7672 | 7974 |
| YP_024682.1 | NC_005882_p9 | Tn552/ IS1604 rve transposase | phrog_310 | transposase | integration and excision | -1 | 4668 | 6467 |
| YP_024710.1 | NC_005882_p37 | conserved protein | phrog_209 | portal protein | head and packaging | 1 | 21810 | 22274 |
| YP_024674.1 | NC_005882_p1 | Mu protein C/ Mortranscription regulator | phrog_532 | late transcriptional activator | transcription regulation | -1 | 365 | 736 |
| YP_024706.1 | NC_005882_p33 | nested conserved protein supported by IST data | singleton | unknown function | unknown function | 1 | 19510 | 19980 |