| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_006882 |
Definition |
Prochlorococcus phage P-SSP7, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Tiamatvirus. |
DB of origin |
REFSEQ |
Length |
45176 |
Host Name |
Prochlorococcus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
58 |
%GC |
38.82 |
Number of singletons |
10 |
Number of paralogs |
3 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_214199.1 | NC_006882_p26 | hypothetical protein | phrog_4970 | unknown function | unknown function | 1 | 16213 | 16404 |
| YP_214191.1 | NC_006882_p13 | T7-like RNA polymerase | phrog_414 | RNA polymerase | DNA, RNA and nucleotide metabolism | 1 | 6039 | 8375 |
| YP_214202.1 | NC_006882_p29 | T7-like capsid assembly protein | phrog_1052 | head assembly | head and packaging | 1 | 18253 | 19050 |
| YP_214206.1 | NC_006882_p33 | T7-like capsid protein | phrog_267 | major head protein | head and packaging | 1 | 20822 | 21949 |
| YP_214190.1 | NC_006882_p12 | phage-related integrase | phrog_1 | integrase | integration and excision | 1 | 4896 | 5768 |
| YP_214218.1 | NC_006882_p45 | hypothetical protein | phrog_6942 | tail fiber protein | tail | 1 | 37095 | 37736 |
| YP_214182.1 | NC_006882_p4 | hypothetical protein | phrog_25438 | unknown function | unknown function | 1 | 2900 | 3130 |
| YP_006355439.1 | NC_006882_p21 | hypothetical protein | singleton | unknown function | unknown function | 1 | 13741 | 14052 |
| YP_214216.1 | NC_006882_p43 | hypothetical protein | phrog_6942 | tail fiber protein | tail | 1 | 36190 | 36765 |
| YP_214205.1 | NC_006882_p32 | hypothetical protein | singleton | unknown function | unknown function | 1 | 20396 | 20515 |
| YP_214214.1 | NC_006882_p41 | hypothetical protein | phrog_6942 | tail fiber protein | tail | 1 | 35016 | 35597 |
| YP_214193.1 | NC_006882_p15 | T7-like endonuclease | phrog_945 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 8944 | 9294 |
| YP_214225.1 | NC_006882_p52 | hypothetical protein | phrog_6437 | unknown function | unknown function | 1 | 39734 | 39982 |
| YP_214219.1 | NC_006882_p46 | hypothetical protein | phrog_9426 | unknown function | unknown function | 1 | 37739 | 38104 |
| YP_214192.1 | NC_006882_p14 | T7-like ssDNA binding protein | phrog_112 | Gp2.5-like ssDNA binding protein and ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 8375 | 8944 |
| YP_006355437.1 | NC_006882_p17 | T7-like DNA polymerase 3'-5' exonuclease | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 10928 | 11461 |
| YP_006355441.1 | NC_006882_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14657 | 14893 |
| YP_214180.1 | NC_006882_p2 | hypothetical protein | phrog_757 | DNA methyltransferase | other | 1 | 1845 | 2423 |
| YP_214197.1 | NC_006882_p22 | ribonucleotide reductase class II | phrog_367 | ribonucleotide reductase | DNA, RNA and nucleotide metabolism | 1 | 14128 | 15534 |
| YP_214203.1 | NC_006882_p30 | high-light inducible protein | phrog_178 | high light inducible protein | other | 1 | 19050 | 19241 |
| YP_214189.1 | NC_006882_p11 | gp0.7 | phrog_9665 | transcriptional regulator | transcription regulation | 1 | 4544 | 4918 |
| YP_214211.1 | NC_006882_p38 | T7-like internal core protein | singleton | unknown function | unknown function | 1 | 26558 | 29071 |
| YP_214229.1 | NC_006882_p56 | hypothetical protein | phrog_16742 | unknown function | unknown function | 1 | 43971 | 44249 |
| YP_006355438.1 | NC_006882_p18 | T7-like DNA polymerase nucleotidyl transferase | phrog_15971 | DNA polymerase I | DNA, RNA and nucleotide metabolism | 1 | 11422 | 12693 |
| YP_214209.1 | NC_006882_p36 | hypothetical protein | phrog_308 | internal virion protein | head and packaging | 1 | 25531 | 25977 |
| YP_214183.1 | NC_006882_p5 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3127 | 3291 |
| YP_214221.1 | NC_006882_p48 | hypothetical protein | phrog_650 | unknown function | unknown function | 1 | 38376 | 38738 |
| YP_214184.1 | NC_006882_p6 | hypothetical protein | phrog_23048 | unknown function | unknown function | 1 | 3288 | 3470 |
| YP_214222.1 | NC_006882_p49 | hypothetical protein | phrog_1755 | unknown function | unknown function | 1 | 38783 | 39238 |
| YP_214228.1 | NC_006882_p55 | DNA maturase beta subunit | phrog_38 | terminase large subunit | head and packaging | 1 | 42081 | 43814 |
| YP_214194.1 | NC_006882_p16 | T7-like primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 9291 | 10853 |
| YP_214231.1 | NC_006882_p58 | transaldolase family protein | phrog_440 | transaldolase | other | 1 | 44319 | 44963 |
| YP_214186.1 | NC_006882_p8 | hypothetical protein | phrog_9569 | unknown function | unknown function | 1 | 3724 | 4062 |
| YP_214230.1 | NC_006882_p57 | hypothetical protein | phrog_36745 | unknown function | unknown function | 1 | 44242 | 44322 |
| YP_214227.1 | NC_006882_p54 | hypothetical protein | singleton | unknown function | unknown function | 1 | 40359 | 42065 |
| YP_214200.1 | NC_006882_p27 | hypothetical protein | phrog_13568 | unknown function | unknown function | 1 | 16404 | 16685 |
| YP_214213.1 | NC_006882_p40 | T7-like tail fiber | phrog_21412 | tail fiber protein | tail | 1 | 32865 | 35012 |
| YP_214185.1 | NC_006882_p7 | hypothetical protein | singleton | unknown function | unknown function | 1 | 3617 | 3727 |
| YP_214187.1 | NC_006882_p9 | hypothetical protein | phrog_21680 | unknown function | unknown function | 1 | 4055 | 4189 |
| YP_214212.1 | NC_006882_p39 | T7-like internal core protein | phrog_6651 | internal virion protein | head and packaging | 1 | 29091 | 32828 |
| YP_214208.1 | NC_006882_p35 | T7-like tail tubular protein B | phrog_457 | tail protein | tail | 1 | 22608 | 25538 |
| YP_214204.1 | NC_006882_p31 | core photosystem II reaction center protein | phrog_182 | photosystem II D1 | moron, auxiliary metabolic gene and host takeover | 1 | 19242 | 20321 |
| YP_214215.1 | NC_006882_p42 | hypothetical protein | phrog_6942 | tail fiber protein | tail | 1 | 35594 | 36190 |
| YP_006355440.1 | NC_006882_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 14426 | 14653 |
| YP_214195.1 | NC_006882_p19 | hypothetical protein | phrog_23404 | unknown function | unknown function | 1 | 12697 | 13071 |
| YP_214226.1 | NC_006882_p53 | possible endonuclease | phrog_2214 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 39979 | 40311 |
| YP_214188.1 | NC_006882_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 4234 | 4353 |
| YP_214224.1 | NC_006882_p51 | hypothetical protein | phrog_891 | terminase small subunit | head and packaging | 1 | 39508 | 39750 |
| YP_214201.1 | NC_006882_p28 | T7-like head-to-tail connector | phrog_449 | head-tail adaptor | connector | 1 | 16685 | 18253 |
| YP_214210.2 | NC_006882_p37 | hypothetical protein | phrog_19322 | unknown function | unknown function | 1 | 25955 | 26557 |
| YP_214220.1 | NC_006882_p47 | hypothetical protein | phrog_721 | unknown function | unknown function | 1 | 38068 | 38379 |
| YP_214179.1 | NC_006882_p1 | hypothetical protein | phrog_2554 | unknown function | unknown function | 1 | 1079 | 1816 |
| YP_214196.1 | NC_006882_p20 | T7-like exonuclease | phrog_107 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 13068 | 13847 |
| YP_214181.1 | NC_006882_p3 | hypothetical protein | phrog_9069 | unknown function | unknown function | 1 | 2637 | 2903 |
| YP_214223.1 | NC_006882_p50 | hypothetical protein | singleton | unknown function | unknown function | 1 | 39347 | 39511 |
| YP_214198.1 | NC_006882_p25 | hypothetical protein | phrog_6799 | ribonucleotide reductase class Ia beta subunit | DNA, RNA and nucleotide metabolism | 1 | 15531 | 16244 |
| YP_214207.1 | NC_006882_p34 | T7-like tail tubular protein A | phrog_446 | tail protein | tail | 1 | 21994 | 22608 |
| YP_214217.1 | NC_006882_p44 | hypothetical protein | phrog_9114 | unknown function | unknown function | 1 | 36793 | 37083 |