Genomic map of Prochlorococcus phage P-SSP7 (NC_006882)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_006882
Definition
Prochlorococcus phage P-SSP7, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Tiamatvirus.
DB of origin
REFSEQ
Length
45176
Host Name
Prochlorococcus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
58
%GC
38.82
Number of singletons
10
Number of paralogs
3

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_214199.1 NC_006882_p26 hypothetical protein phrog_4970 unknown function unknown function 1 16213 16404
YP_214191.1 NC_006882_p13 T7-like RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 6039 8375
YP_214202.1 NC_006882_p29 T7-like capsid assembly protein phrog_1052 head assembly head and packaging 1 18253 19050
YP_214206.1 NC_006882_p33 T7-like capsid protein phrog_267 major head protein head and packaging 1 20822 21949
YP_214190.1 NC_006882_p12 phage-related integrase phrog_1 integrase integration and excision 1 4896 5768
YP_214218.1 NC_006882_p45 hypothetical protein phrog_6942 tail fiber protein tail 1 37095 37736
YP_214182.1 NC_006882_p4 hypothetical protein phrog_25438 unknown function unknown function 1 2900 3130
YP_006355439.1 NC_006882_p21 hypothetical protein singleton unknown function unknown function 1 13741 14052
YP_214216.1 NC_006882_p43 hypothetical protein phrog_6942 tail fiber protein tail 1 36190 36765
YP_214205.1 NC_006882_p32 hypothetical protein singleton unknown function unknown function 1 20396 20515
YP_214214.1 NC_006882_p41 hypothetical protein phrog_6942 tail fiber protein tail 1 35016 35597
YP_214193.1 NC_006882_p15 T7-like endonuclease phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 8944 9294
YP_214225.1 NC_006882_p52 hypothetical protein phrog_6437 unknown function unknown function 1 39734 39982
YP_214219.1 NC_006882_p46 hypothetical protein phrog_9426 unknown function unknown function 1 37739 38104
YP_214192.1 NC_006882_p14 T7-like ssDNA binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8375 8944
YP_006355437.1 NC_006882_p17 T7-like DNA polymerase 3'-5' exonuclease phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 10928 11461
YP_006355441.1 NC_006882_p24 hypothetical protein singleton unknown function unknown function 1 14657 14893
YP_214180.1 NC_006882_p2 hypothetical protein phrog_757 DNA methyltransferase other 1 1845 2423
YP_214197.1 NC_006882_p22 ribonucleotide reductase class II phrog_367 ribonucleotide reductase DNA, RNA and nucleotide metabolism 1 14128 15534
YP_214203.1 NC_006882_p30 high-light inducible protein phrog_178 high light inducible protein other 1 19050 19241
YP_214189.1 NC_006882_p11 gp0.7 phrog_9665 transcriptional regulator transcription regulation 1 4544 4918
YP_214211.1 NC_006882_p38 T7-like internal core protein singleton unknown function unknown function 1 26558 29071
YP_214229.1 NC_006882_p56 hypothetical protein phrog_16742 unknown function unknown function 1 43971 44249
YP_006355438.1 NC_006882_p18 T7-like DNA polymerase nucleotidyl transferase phrog_15971 DNA polymerase I DNA, RNA and nucleotide metabolism 1 11422 12693
YP_214209.1 NC_006882_p36 hypothetical protein phrog_308 internal virion protein head and packaging 1 25531 25977
YP_214183.1 NC_006882_p5 hypothetical protein singleton unknown function unknown function 1 3127 3291
YP_214221.1 NC_006882_p48 hypothetical protein phrog_650 unknown function unknown function 1 38376 38738
YP_214184.1 NC_006882_p6 hypothetical protein phrog_23048 unknown function unknown function 1 3288 3470
YP_214222.1 NC_006882_p49 hypothetical protein phrog_1755 unknown function unknown function 1 38783 39238
YP_214228.1 NC_006882_p55 DNA maturase beta subunit phrog_38 terminase large subunit head and packaging 1 42081 43814
YP_214194.1 NC_006882_p16 T7-like primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 9291 10853
YP_214231.1 NC_006882_p58 transaldolase family protein phrog_440 transaldolase other 1 44319 44963
YP_214186.1 NC_006882_p8 hypothetical protein phrog_9569 unknown function unknown function 1 3724 4062
YP_214230.1 NC_006882_p57 hypothetical protein phrog_36745 unknown function unknown function 1 44242 44322
YP_214227.1 NC_006882_p54 hypothetical protein singleton unknown function unknown function 1 40359 42065
YP_214200.1 NC_006882_p27 hypothetical protein phrog_13568 unknown function unknown function 1 16404 16685
YP_214213.1 NC_006882_p40 T7-like tail fiber phrog_21412 tail fiber protein tail 1 32865 35012
YP_214185.1 NC_006882_p7 hypothetical protein singleton unknown function unknown function 1 3617 3727
YP_214187.1 NC_006882_p9 hypothetical protein phrog_21680 unknown function unknown function 1 4055 4189
YP_214212.1 NC_006882_p39 T7-like internal core protein phrog_6651 internal virion protein head and packaging 1 29091 32828
YP_214208.1 NC_006882_p35 T7-like tail tubular protein B phrog_457 tail protein tail 1 22608 25538
YP_214204.1 NC_006882_p31 core photosystem II reaction center protein phrog_182 photosystem II D1 moron, auxiliary metabolic gene and host takeover 1 19242 20321
YP_214215.1 NC_006882_p42 hypothetical protein phrog_6942 tail fiber protein tail 1 35594 36190
YP_006355440.1 NC_006882_p23 hypothetical protein singleton unknown function unknown function 1 14426 14653
YP_214195.1 NC_006882_p19 hypothetical protein phrog_23404 unknown function unknown function 1 12697 13071
YP_214226.1 NC_006882_p53 possible endonuclease phrog_2214 HNH endonuclease DNA, RNA and nucleotide metabolism 1 39979 40311
YP_214188.1 NC_006882_p10 hypothetical protein singleton unknown function unknown function 1 4234 4353
YP_214224.1 NC_006882_p51 hypothetical protein phrog_891 terminase small subunit head and packaging 1 39508 39750
YP_214201.1 NC_006882_p28 T7-like head-to-tail connector phrog_449 head-tail adaptor connector 1 16685 18253
YP_214210.2 NC_006882_p37 hypothetical protein phrog_19322 unknown function unknown function 1 25955 26557
YP_214220.1 NC_006882_p47 hypothetical protein phrog_721 unknown function unknown function 1 38068 38379
YP_214179.1 NC_006882_p1 hypothetical protein phrog_2554 unknown function unknown function 1 1079 1816
YP_214196.1 NC_006882_p20 T7-like exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 13068 13847
YP_214181.1 NC_006882_p3 hypothetical protein phrog_9069 unknown function unknown function 1 2637 2903
YP_214223.1 NC_006882_p50 hypothetical protein singleton unknown function unknown function 1 39347 39511
YP_214198.1 NC_006882_p25 hypothetical protein phrog_6799 ribonucleotide reductase class Ia beta subunit DNA, RNA and nucleotide metabolism 1 15531 16244
YP_214207.1 NC_006882_p34 T7-like tail tubular protein A phrog_446 tail protein tail 1 21994 22608
YP_214217.1 NC_006882_p44 hypothetical protein phrog_9114 unknown function unknown function 1 36793 37083