| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_006949 |
Definition |
Enterobacteria phage ES18, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
46900 |
Host Name |
Salmonella typhimurium |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
79 |
%GC |
48.59 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_224215.1 | NC_006949_p77 | lysis protein | phrog_13 | Rz-like spanin | lysis | 1 | 45107 | 45577 |
| YP_224154.1 | NC_006949_p16 | tail shaft protein | phrog_853 | major tail protein | tail | 1 | 9350 | 10087 |
| YP_224205.1 | NC_006949_p67 | function unknown | phrog_672 | unknown function | unknown function | 1 | 41593 | 41775 |
| YP_224149.1 | NC_006949_p11 | function unknown | phrog_786 | unknown function | unknown function | 1 | 7613 | 8014 |
| YP_224181.1 | NC_006949_p43 | function unknown | phrog_614 | unknown function | unknown function | -1 | 30773 | 31399 |
| YP_224182.1 | NC_006949_p44 | function unknown | phrog_1117 | unknown function | unknown function | -1 | 31387 | 31557 |
| YP_224148.1 | NC_006949_p10 | function unknown | phrog_2138 | unknown function | unknown function | 1 | 7373 | 7561 |
| YP_224159.1 | NC_006949_p21 | tape measure protein | phrog_1107 | tail length tape measure protein | tail | 1 | 13303 | 16677 |
| YP_224153.1 | NC_006949_p15 | function unknown | phrog_782 | unknown function | unknown function | 1 | 8948 | 9334 |
| YP_224211.1 | NC_006949_p73 | late operon transcriptional activator | phrog_127 | anti-termination protein Q-like | transcription regulation | 1 | 43158 | 43922 |
| YP_224195.1 | NC_006949_p57 | transcription activation | phrog_191 | CII-like transcriptional activator | transcription regulation | 1 | 37196 | 37474 |
| YP_224165.1 | NC_006949_p27 | tail tip protein | phrog_30 | minor tail protein | tail | 1 | 18948 | 19667 |
| YP_224208.1 | NC_006949_p70 | function unknown | phrog_3496 | unknown function | unknown function | 1 | 42577 | 42801 |
| YP_224162.1 | NC_006949_p24 | possible moron | phrog_2735 | unknown function | unknown function | 1 | 17528 | 17788 |
| YP_224192.1 | NC_006949_p54 | similar to transcription anti-termination phage P22 gene 24 | phrog_271 | anti-termination protein N-like | transcription regulation | -1 | 35490 | 35819 |
| YP_224185.1 | NC_006949_p47 | function unknown | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 32213 | 32734 |
| YP_224184.1 | NC_006949_p46 | involved in homologous recombination | phrog_656 | abc2 anti-RecBCD | moron, auxiliary metabolic gene and host takeover | -1 | 31852 | 32169 |
| YP_224178.1 | NC_006949_p40 | function unknown | phrog_8303 | unknown function | unknown function | -1 | 29345 | 29590 |
| YP_224158.1 | NC_006949_p20 | possible moron | phrog_2320 | unknown function | unknown function | 1 | 12786 | 13241 |
| YP_224143.1 | NC_006949_p5 | portal protein | phrog_146 | portal protein | head and packaging | 1 | 2304 | 3653 |
| YP_224163.1 | NC_006949_p25 | possible moron | phrog_10490 | unknown function | unknown function | -1 | 17793 | 18080 |
| YP_224206.1 | NC_006949_p68 | function unknown | phrog_3379 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41756 | 41974 |
| YP_224160.1 | NC_006949_p22 | possible moron | phrog_13469 | unknown function | unknown function | -1 | 16678 | 17076 |
| YP_224210.1 | NC_006949_p72 | function unknown | phrog_1402 | unknown function | unknown function | 1 | 42982 | 43161 |
| YP_224217.1 | NC_006949_p79 | affects growth in host lacking integration host factor (IHF) | phrog_2657 | transcriptional regulator | transcription regulation | 1 | 45795 | 46484 |
| YP_224214.1 | NC_006949_p76 | lysozyme | phrog_7 | endolysin | lysis | 1 | 44673 | 45110 |
| YP_224186.1 | NC_006949_p48 | bacterial type single strand DNA binding protein (ssb) | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 32773 | 33243 |
| YP_224170.1 | NC_006949_p32 | super-infection exclusion protein | phrog_1119 | Cor superinfection exclusion protein | moron, auxiliary metabolic gene and host takeover | -1 | 24448 | 24690 |
| YP_224204.1 | NC_006949_p66 | function unknown | phrog_288 | unknown function | unknown function | 1 | 41420 | 41596 |
| YP_224145.1 | NC_006949_p7 | function unknown | phrog_760 | unknown function | unknown function | 1 | 4542 | 5807 |
| YP_224188.1 | NC_006949_p50 | function unknown | phrog_1723 | recombinase | other | -1 | 33960 | 34148 |
| YP_224216.1 | NC_006949_p78 | lysis protein | phrog_3198 | Rz-like spanin | lysis | 1 | 45327 | 45515 |
| YP_224193.1 | NC_006949_p55 | prophage repressor | phrog_4 | transcriptional repressor | transcription regulation | -1 | 36173 | 36823 |
| YP_224174.1 | NC_006949_p36 | function unknown | phrog_924 | unknown function | unknown function | -1 | 27835 | 28191 |
| YP_224212.1 | NC_006949_p74 | Holin inhibitor | phrog_126 | holin/anti-holin | lysis | 1 | 44363 | 44689 |
| YP_224168.1 | NC_006949_p30 | function unknown | phrog_557 | outer membrane protein | other | 1 | 23299 | 23613 |
| YP_224213.1 | NC_006949_p75 | Holin inhibitor | phrog_126 | holin/anti-holin | lysis | 1 | 44372 | 44689 |
| YP_224198.1 | NC_006949_p60 | function unknown | phrog_21848 | unknown function | unknown function | 1 | 38509 | 38616 |
| YP_224194.1 | NC_006949_p56 | Cro repressor | phrog_409 | transcriptional regulator | transcription regulation | 1 | 36904 | 37089 |
| YP_224139.1 | NC_006949_p1 | possible small terminase subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 1 | 432 |
| YP_224201.1 | NC_006949_p63 | function unknown | phrog_5907 | unknown function | unknown function | 1 | 40769 | 40849 |
| YP_224151.1 | NC_006949_p13 | function unknown | phrog_797 | unknown function | unknown function | 1 | 8186 | 8548 |
| YP_224157.1 | NC_006949_p19 | possible moron | phrog_1847 | unknown function | unknown function | 1 | 11144 | 12673 |
| YP_224150.1 | NC_006949_p12 | function unknown | phrog_1261 | unknown function | unknown function | 1 | 8014 | 8193 |
| YP_224141.1 | NC_006949_p3 | function unknown | phrog_3439 | unknown function | unknown function | 1 | 1797 | 2063 |
| YP_224199.1 | NC_006949_p61 | primase/helicase | phrog_239 | DNA primase/helicase | DNA, RNA and nucleotide metabolism | 1 | 38613 | 40493 |
| YP_224189.1 | NC_006949_p51 | inhibitor of host septation | phrog_3924 | Kil protein for bacterial septation inhibition | other | -1 | 34145 | 34258 |
| YP_224179.1 | NC_006949_p41 | function unknown | phrog_250 | unknown function | unknown function | -1 | 29590 | 30414 |
| YP_224161.1 | NC_006949_p23 | tail tip protein | phrog_14 | minor tail protein | tail | 1 | 17169 | 17516 |
| YP_224200.1 | NC_006949_p62 | function unknown | phrog_5692 | unknown function | unknown function | 1 | 40494 | 40772 |
| YP_224187.1 | NC_006949_p49 | involved in homologous recombination | phrog_1097 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 33244 | 33951 |
| YP_224146.1 | NC_006949_p8 | decoration protein | phrog_766 | head decoration | head and packaging | 1 | 5820 | 6269 |
| YP_224177.1 | NC_006949_p39 | function unknown | phrog_1832 | released from the phage upon host infection | other | -1 | 29125 | 29343 |
| YP_224203.1 | NC_006949_p65 | function unknown | phrog_8091 | unknown function | unknown function | 1 | 41280 | 41453 |
| YP_224164.1 | NC_006949_p26 | tail tip protein | phrog_18 | minor tail protein | tail | 1 | 18244 | 18948 |
| YP_224152.1 | NC_006949_p14 | function unknown | phrog_5 | tail completion or Neck1 protein | connector | 1 | 8556 | 8951 |
| YP_224142.1 | NC_006949_p4 | function unknown | singleton | unknown function | unknown function | 1 | 2135 | 2293 |
| YP_224172.1 | NC_006949_p34 | integrase | phrog_1 | integrase | integration and excision | -1 | 26402 | 27565 |
| YP_224171.1 | NC_006949_p33 | tail tip protein | phrog_1980 | tail fiber protein | tail | 1 | 24810 | 25946 |
| YP_224196.1 | NC_006949_p58 | function unknown | phrog_1331 | unknown function | unknown function | 1 | 37509 | 37670 |
| YP_224207.1 | NC_006949_p69 | function unknown | phrog_171 | NinG/ Rap DNA junction specific endonuclease | DNA, RNA and nucleotide metabolism | 1 | 41975 | 42580 |
| YP_224209.1 | NC_006949_p71 | function unknown | phrog_268 | unknown function | unknown function | 1 | 42798 | 43001 |
| YP_224183.1 | NC_006949_p45 | function unknown | phrog_154 | replication initiation protein | DNA, RNA and nucleotide metabolism | -1 | 31554 | 31841 |
| YP_224191.1 | NC_006949_p53 | function unknown | phrog_4433 | unknown function | unknown function | -1 | 34591 | 35439 |
| YP_224166.1 | NC_006949_p28 | tail tip protein | phrog_32 | tail assembly protein | tail | 1 | 19790 | 20137 |
| YP_224156.1 | NC_006949_p18 | possible moron | phrog_13929 | unknown function | unknown function | 1 | 10865 | 11038 |
| YP_224155.1 | NC_006949_p17 | function unknown | phrog_791 | unknown function | unknown function | 1 | 10133 | 10786 |
| YP_224202.1 | NC_006949_p64 | function unknown | phrog_72 | NinB/ Orf homologous recombination mediator | DNA, RNA and nucleotide metabolism | 1 | 40846 | 41283 |
| YP_224167.1 | NC_006949_p29 | tail tip protein | phrog_31 | central tail fiber J | tail | 1 | 20147 | 23302 |
| YP_224140.1 | NC_006949_p2 | possible large terminase subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 416 | 1735 |
| YP_224173.1 | NC_006949_p35 | excisionase | phrog_2907 | excisionase | integration and excision | -1 | 27442 | 27792 |
| YP_224180.1 | NC_006949_p42 | function unknown | phrog_20542 | unknown function | unknown function | -1 | 30411 | 30776 |
| YP_224147.1 | NC_006949_p9 | coat protein | phrog_771 | virion structural protein | head and packaging | 1 | 6287 | 7363 |
| YP_224190.1 | NC_006949_p52 | inhibitor of host hflB proteiase | singleton | CIII anti-termination | transcription regulation | -1 | 34305 | 34391 |
| YP_224144.1 | NC_006949_p6 | head assembly protein | phrog_758 | head morphogenesis | head and packaging | 1 | 3613 | 4539 |
| YP_224169.1 | NC_006949_p31 | function unknown | phrog_425 | membrane associated protein | moron, auxiliary metabolic gene and host takeover | 1 | 23613 | 24266 |
| YP_224175.1 | NC_006949_p37 | function unknown | phrog_60 | unknown function | unknown function | -1 | 28188 | 28748 |
| YP_224176.1 | NC_006949_p38 | function unknown | phrog_3323 | unknown function | unknown function | -1 | 28741 | 29121 |
| YP_224197.1 | NC_006949_p59 | inhibition of DNA replication | phrog_270 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 37657 | 38505 |