Genomic map of Streptococcus virus 2972 (NC_007019)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007019
Definition
Streptococcus phage 2972, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Brussowvirus.
DB of origin
REFSEQ
Length
34704
Host Name
Streptococcus thermophilus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
44
%GC
40.15
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_238525.1 NC_007019_p42 DNA binding protein phrog_1994 DNA binding protein DNA, RNA and nucleotide metabolism 1 33185 33697
YP_238485.1 NC_007019_p2 terminase small subunit phrog_51 terminase small subunit head and packaging 1 1009 1461
YP_238526.1 NC_007019_p43 hypothetical protein phrog_884 unknown function unknown function 1 33666 33992
YP_238490.1 NC_007019_p7 scaffold protein phrog_172 head scaffolding protein head and packaging 1 5583 6164
YP_238486.1 NC_007019_p3 terminase large subunit phrog_2 terminase large subunit head and packaging 1 1448 2119
YP_238520.1 NC_007019_p37 replication protein phrog_695 DNA polymerase/primase DNA, RNA and nucleotide metabolism 1 29896 30711
YP_238501.1 NC_007019_p18 tail protein phrog_1204 tail protein tail 1 10483 15036
YP_238491.1 NC_007019_p8 head protein phrog_909 major head protein head and packaging 1 6184 6543
YP_238503.1 NC_007019_p20 antireceptor phrog_588 tail fiber protein and host specificity tail 1 16571 21388
YP_238512.1 NC_007019_p29 lysin phrog_4238 endolysin lysis 1 25747 25974
YP_238504.1 NC_007019_p21 structural protein phrog_372 tail protein tail 1 21389 23410
YP_238524.1 NC_007019_p41 hypothetical protein phrog_1489 unknown function unknown function 1 33029 33184
YP_238519.1 NC_007019_p36 hypothetical protein phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 29438 29893
YP_238492.1 NC_007019_p9 head protein phrog_29 major head protein head and packaging 1 6562 7608
YP_238513.1 NC_007019_p30 hypothetical protein phrog_36681 unknown function unknown function 1 26142 26273
YP_238493.1 NC_007019_p10 hypothetical protein phrog_5279 unknown function unknown function 1 7620 7781
YP_238517.1 NC_007019_p34 hypothetical protein phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 27436 28137
YP_238518.1 NC_007019_p35 helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 28094 29431
YP_238498.1 NC_007019_p15 tail protein phrog_238 major tail protein tail 1 9187 9696
YP_238516.1 NC_007019_p33 hypothetical protein phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 26966 27439
YP_238489.1 NC_007019_p6 head protein phrog_115 minor head protein head and packaging 1 4502 5395
YP_238523.1 NC_007019_p40 hypothetical protein phrog_1982 unknown function unknown function 1 32770 33021
YP_238514.1 NC_007019_p31 cro-like repressor phrog_3 transcriptional repressor transcription regulation 1 26374 26583
YP_238527.1 NC_007019_p44 hypothetical protein phrog_1814 unknown function unknown function 1 33996 34703
YP_238497.1 NC_007019_p14 hypothetical protein phrog_176 tail terminator connector 1 8787 9173
YP_238505.1 NC_007019_p22 hypothetical protein phrog_1060 unknown function unknown function 1 23427 23813
YP_238487.1 NC_007019_p4 terminase large subunit phrog_5653 terminase large subunit head and packaging 1 2404 2991
YP_238502.1 NC_007019_p19 tail protein phrog_202 distal tail protein Dit tail 1 15036 16571
YP_238511.1 NC_007019_p28 hypothetical protein phrog_9496 endonuclease DNA, RNA and nucleotide metabolism 1 25495 25680
YP_238496.1 NC_007019_p13 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 8447 8785
YP_238515.1 NC_007019_p32 hypothetical protein phrog_1022 unknown function unknown function 1 26600 26722
YP_238494.1 NC_007019_p11 hypothetical protein phrog_132 head-tail adaptor connector 1 7793 8134
YP_238521.1 NC_007019_p38 primase phrog_864 DNA primase DNA, RNA and nucleotide metabolism 1 30698 32215
YP_238507.1 NC_007019_p24 hypothetical protein phrog_18008 unknown function unknown function 1 24009 24341
YP_238509.1 NC_007019_p26 lysin phrog_998 endolysin lysis 1 24689 25288
YP_238484.1 NC_007019_p1 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 414 827
YP_238522.1 NC_007019_p39 hypothetical protein phrog_93 endonuclease DNA, RNA and nucleotide metabolism 1 32466 32786
YP_238506.1 NC_007019_p23 hypothetical protein phrog_1382 unknown function unknown function 1 23839 23982
YP_238499.1 NC_007019_p16 hypothetical protein phrog_183 tail chaperone protein tail 1 9772 10125
YP_238510.1 NC_007019_p27 hypothetical protein phrog_8818 unknown function unknown function 1 25334 25456
YP_238495.1 NC_007019_p12 hypothetical protein phrog_348 minor head protein head and packaging 1 8131 8445
YP_238508.1 NC_007019_p25 holin phrog_608 holin lysis 1 24366 24692
YP_238488.1 NC_007019_p5 portal protein phrog_64 portal protein head and packaging 1 3000 4505
YP_238500.1 NC_007019_p17 hypothetical protein phrog_441 tail assembly chaperone tail 1 10176 10493