Genomic map of Xanthomonas phage Xp15 (NC_007024)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007024
Definition
Xanthomonas phage Xp15, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
55770
Host Name
Xanthomonas campestris
Host domain
Bacteria
Is prophage?
undef
Number of proteins
84
%GC
51.88
Number of singletons
45
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_239339.1 NC_007024_p71 hypothetical protein singleton unknown function unknown function -1 51291 51518
YP_239284.1 NC_007024_p16 possible phage minor tail protein phrog_290 minor tail protein tail 1 11435 12388
YP_239304.1 NC_007024_p36 thymidylate synthase phrog_160 thymidylate synthase DNA, RNA and nucleotide metabolism -1 30076 30897
YP_239321.1 NC_007024_p53 hypothetical protein singleton unknown function unknown function -1 45146 45418
YP_239329.1 NC_007024_p61 hypothetical protein singleton unknown function unknown function -1 47827 47958
YP_239313.1 NC_007024_p45 exonuclease phrog_69 exonuclease DNA, RNA and nucleotide metabolism -1 37637 38344
YP_239349.1 NC_007024_p81 hypothetical protein singleton unknown function unknown function 1 54482 54601
YP_239323.1 NC_007024_p55 hypothetical protein singleton unknown function unknown function -1 45916 46320
YP_239307.1 NC_007024_p39 cabamoyl transferase phrog_1601 Nol-like carbamoyltransferase moron, auxiliary metabolic gene and host takeover -1 31856 33499
YP_239281.1 NC_007024_p13 hypothetical protein singleton unknown function unknown function 1 10336 10695
YP_239282.1 NC_007024_p14 hypothetical protein phage protein phrog_169 tail completion or Neck1 protein connector 1 10692 11057
YP_239318.1 NC_007024_p50 hypothetical protein singleton unknown function unknown function -1 44222 44530
YP_239296.1 NC_007024_p28 holin phrog_26796 holin lysis 1 25142 25471
YP_239332.1 NC_007024_p64 hypothetical protein singleton unknown function unknown function -1 49469 49726
YP_239334.1 NC_007024_p66 hypothetical protein singleton unknown function unknown function -1 49917 50147
YP_239335.1 NC_007024_p67 hypothetical protein singleton unknown function unknown function -1 50178 50372
YP_239342.1 NC_007024_p74 hypothetical protein singleton unknown function unknown function -1 51840 52028
YP_239315.1 NC_007024_p47 possible DNA binding protein phrog_624 DNA binding protein DNA, RNA and nucleotide metabolism -1 40268 40789
YP_239326.1 NC_007024_p58 hypothetical protein singleton unknown function unknown function -1 47159 47365
YP_239302.1 NC_007024_p34 hypothetical protein singleton unknown function unknown function -1 29310 29501
YP_239285.1 NC_007024_p17 hypothetical protein phrog_313 Tail assembly chaperone tail 1 12406 12795
YP_239269.1 NC_007024_p1 hypothetical protein singleton unknown function unknown function -1 205 390
YP_239305.1 NC_007024_p37 DNA polymerase subunit phrog_761 thymidylate kinase other -1 30897 31379
YP_239328.1 NC_007024_p60 hypothetical protein singleton unknown function unknown function -1 47811 47912
YP_239303.1 NC_007024_p35 deoxycytidylate deaminase phrog_174 dCMP deaminase DNA, RNA and nucleotide metabolism -1 29563 30045
YP_239322.1 NC_007024_p54 hypothetical protein singleton unknown function unknown function -1 45556 45891
YP_239287.1 NC_007024_p19 possible phage tail protein phrog_1716 tail length tape measure protein tail 1 13138 16353
YP_239294.1 NC_007024_p26 holin singleton unknown function unknown function 1 24616 25155
YP_239336.1 NC_007024_p68 hypothetical protein singleton unknown function unknown function -1 50372 50830
YP_239351.1 NC_007024_p83 hypothetical protein singleton unknown function unknown function 1 54862 54981
YP_239290.1 NC_007024_p22 phage minor tail protein phrog_329 minor tail protein tail 1 17185 17577
YP_239319.1 NC_007024_p51 hypothetical protein singleton unknown function unknown function -1 44527 44880
YP_239316.1 NC_007024_p48 possible integrase phrog_1156 DNA primase DNA, RNA and nucleotide metabolism -1 40833 43253
YP_239337.1 NC_007024_p69 hypothetical protein singleton unknown function unknown function -1 50834 50968
YP_239292.1 NC_007024_p24 possible host specificity factor singleton unknown function unknown function 1 21597 24218
YP_239348.1 NC_007024_p80 hypothetical protein phrog_2556 unknown function unknown function 1 54066 54416
YP_239298.1 NC_007024_p30 possible endodeoxyribonuclease phrog_255 exonuclease DNA, RNA and nucleotide metabolism -1 26379 26924
YP_239300.1 NC_007024_p32 possible DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism -1 27160 28329
YP_239346.1 NC_007024_p78 hypothetical protein singleton unknown function unknown function 1 53280 53465
YP_239340.1 NC_007024_p72 hypothetical protein phrog_4767 unknown function unknown function -1 51509 51715
YP_239325.1 NC_007024_p57 possible peptide chain release factor singleton unknown function unknown function -1 46787 47134
YP_239344.1 NC_007024_p76 hypothetical protein singleton unknown function unknown function -1 52326 52781
YP_239333.1 NC_007024_p65 hypothetical protein singleton unknown function unknown function -1 49660 49926
YP_239345.1 NC_007024_p77 hypothetical protein singleton unknown function unknown function 1 52876 52956
YP_239312.1 NC_007024_p44 hypothetical protein singleton unknown function unknown function -1 37386 37637
YP_239272.1 NC_007024_p4 hypothetical protein phrog_19495 unknown function unknown function 1 2198 3781
YP_239341.1 NC_007024_p73 hypothetical protein singleton unknown function unknown function -1 51712 51840
YP_239317.1 NC_007024_p49 thymidylate synthase complementing protein phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism -1 43426 44292
YP_239299.1 NC_007024_p31 hypothetical protein phrog_54 DksA-like zinc-finger protein other -1 26927 27160
YP_239288.1 NC_007024_p20 hypothetical protein phage protein phrog_384 virion structural protein head and packaging 1 16353 16724
YP_239293.1 NC_007024_p25 endolysin phrog_465 endolysin lysis 1 24228 24695
YP_239278.1 NC_007024_p10 phage structural protein phrog_212 major head protein head and packaging 1 8280 9272
YP_239343.1 NC_007024_p75 hypothetical protein singleton unknown function unknown function -1 52021 52257
YP_239280.1 NC_007024_p12 hypothetical protein phrog_477 head-tail adaptor Ad1 connector 1 9827 10339
YP_239309.1 NC_007024_p41 hypothetical protein phrog_13900 minor head protein head and packaging -1 34522 34968
YP_239338.1 NC_007024_p70 endoglucanase singleton unknown function unknown function -1 50968 51291
YP_239286.1 NC_007024_p18 hypothetical protein phrog_4966 unknown function unknown function 1 12900 13157
YP_239273.1 NC_007024_p5 hypothetical protein singleton unknown function unknown function 1 3778 4311
YP_239320.1 NC_007024_p52 hypothetical protein singleton unknown function unknown function -1 44877 45149
YP_239274.1 NC_007024_p6 possible NADH dehydrogenase subunit phrog_218 head closure connector 1 4308 4676
YP_239270.1 NC_007024_p2 hypothetical protein singleton unknown function unknown function -1 466 771
YP_239314.1 NC_007024_p46 possible DNA polymerase subunit phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism -1 38356 40278
YP_239350.1 NC_007024_p82 hypothetical protein singleton unknown function unknown function 1 54717 55226
YP_239297.1 NC_007024_p29 holin singleton unknown function unknown function 1 25472 25918
YP_239311.1 NC_007024_p43 hypothetical protein phrog_1934 unknown function unknown function -1 36899 37270
YP_239271.1 NC_007024_p3 hypothetical protein singleton unknown function unknown function 1 1678 2097
YP_239279.1 NC_007024_p11 possible phage tail fiber protein singleton unknown function unknown function 1 9343 9822
YP_239306.1 NC_007024_p38 hypothetical protein phrog_671 nucleotide pyrophosphohydrolase other -1 31435 31854
YP_239327.1 NC_007024_p59 probable NUDIX hydrolase singleton unknown function unknown function -1 47398 47811
YP_239276.1 NC_007024_p8 phage structural protein phrog_145 portal protein head and packaging 1 6090 7448
YP_239310.1 NC_007024_p42 possible DNA helicase phrog_62 DNA helicase DNA, RNA and nucleotide metabolism -1 35094 36857
YP_239324.1 NC_007024_p56 possible translation initiation factor singleton unknown function unknown function -1 46317 46778
YP_239308.1 NC_007024_p40 hypothetical protein singleton unknown function unknown function -1 33499 34329
YP_239331.1 NC_007024_p63 hypothetical protein singleton unknown function unknown function -1 49074 49448
YP_239289.1 NC_007024_p21 hypothetical protein phage protein phrog_396 minor tail protein tail 1 16724 17185
YP_239295.1 NC_007024_p27 holin phrog_26796 holin lysis 1 25139 25471
YP_239301.1 NC_007024_p33 DNA dependent DNA polymerase phrog_474 phosphofructokinase other -1 28507 29313
YP_239347.1 NC_007024_p79 hypothetical protein singleton unknown function unknown function 1 53434 54072
YP_239283.1 NC_007024_p15 possible peptidoglycan binding protein phrog_179 tail terminator connector 1 11054 11431
YP_239352.1 NC_007024_p84 hypothetical protein singleton unknown function unknown function 1 55271 55393
YP_239291.1 NC_007024_p23 possible phage tail protein phrog_31 central tail fiber J tail 1 17568 21587
YP_239277.1 NC_007024_p9 phage structural protein phrog_206 head scaffolding protein head and packaging 1 7452 8168
YP_239275.1 NC_007024_p7 phage terminase large subunit phrog_2 terminase large subunit head and packaging 1 4666 6087
YP_239330.1 NC_007024_p62 hypothetical protein singleton unknown function unknown function -1 48913 49077