Genomic map of Staphylococcus virus 187 (NC_007047)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007047
Definition
Staphylococcus phage 187, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
39620
Host Name
Staphylococcus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
34.25
Number of singletons
9
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_239500.1 NC_007047_p13 protein of an unannotated phage phrog_183 tail chaperone protein tail 1 8550 8930
YP_239556.1 NC_007047_p69 protein of an unannotated phage phrog_1034 unknown function unknown function 1 36739 37029
YP_239532.1 NC_007047_p45 protein of an unannotated phage singleton unknown function unknown function 1 28578 28760
YP_239549.1 NC_007047_p62 protein of an unannotated phage phrog_299 unknown function unknown function 1 34724 34909
YP_239531.1 NC_007047_p44 protein of an unannotated phage phrog_63 anti-repressor Ant transcription regulation 1 27810 28562
YP_239514.1 NC_007047_p27 protein of an unannotated phage singleton unknown function unknown function 1 18418 18600
YP_239550.1 NC_007047_p63 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 34910 35167
YP_239523.1 NC_007047_p36 protein of an unannotated phage phrog_1914 unknown function unknown function -1 24873 25547
YP_239499.1 NC_007047_p12 protein of an unannotated phage phrog_238 major tail protein tail 1 7838 8491
YP_239522.1 NC_007047_p35 protein of an unannotated phage phrog_888 unknown function unknown function -1 24120 24845
YP_239497.1 NC_007047_p10 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 7065 7412
YP_239491.1 NC_007047_p4 protein of an unannotated phage phrog_115 minor head protein head and packaging 1 3259 4227
YP_239489.1 NC_007047_p2 protein of an unannotated phage phrog_2 terminase large subunit head and packaging 1 478 1818
YP_239537.1 NC_007047_p50 protein of an unannotated phage phrog_13915 unknown function unknown function -1 29313 29423
YP_239501.1 NC_007047_p14 protein of an unannotated phage phrog_441 tail assembly chaperone tail 1 8960 9310
YP_239508.1 NC_007047_p21 protein of an unannotated phage singleton unknown function unknown function -1 14092 14241
YP_239498.1 NC_007047_p11 protein of an unannotated phage phrog_176 tail terminator connector 1 7425 7820
YP_239533.1 NC_007047_p46 protein of an unannotated phage singleton unknown function unknown function -1 28728 28844
YP_239552.1 NC_007047_p65 protein of an unannotated phage phrog_258 virulence associated other 1 35539 35781
YP_239535.1 NC_007047_p48 protein of an unannotated phage phrog_534 DNA binding protein DNA, RNA and nucleotide metabolism 1 29017 29280
YP_239544.1 NC_007047_p57 protein of an unannotated phage phrog_1163 unknown function unknown function 1 32332 33135
YP_239558.1 NC_007047_p71 protein of an unannotated phage phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 37263 37796
YP_239534.1 NC_007047_p47 protein of an unannotated phage phrog_4298 unknown function unknown function -1 28738 28953
YP_239504.1 NC_007047_p17 protein of an unannotated phage singleton unknown function unknown function 1 11311 11715
YP_239557.1 NC_007047_p70 protein of an unannotated phage phrog_266 unknown function unknown function 1 37022 37270
YP_239555.1 NC_007047_p68 protein of an unannotated phage phrog_98 unknown function unknown function 1 36376 36723
YP_239545.1 NC_007047_p58 protein of an unannotated phage phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 33145 33918
YP_239529.1 NC_007047_p42 protein of an unannotated phage phrog_3240 unknown function unknown function -1 27544 27753
YP_239516.1 NC_007047_p29 protein of an unannotated phage phrog_297 holin lysis 1 20384 20638
YP_239507.1 NC_007047_p20 protein of an unannotated phage phrog_326 tail protein with endopeptidase domain other 1 13391 14788
YP_239536.1 NC_007047_p49 protein of an unannotated phage phrog_369 unknown function unknown function 1 29293 29454
YP_239520.1 NC_007047_p33 protein of an unannotated phage phrog_6988 unknown function unknown function -1 23250 23657
YP_239525.1 NC_007047_p38 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 26159 26353
YP_239512.1 NC_007047_p25 protein of an unannotated phage singleton unknown function unknown function 1 17940 18062
YP_239517.1 NC_007047_p30 protein of an unannotated phage phrog_635 endolysin lysis 1 20650 21405
YP_239538.1 NC_007047_p51 protein of an unannotated phage phrog_401 unknown function unknown function 1 29546 29806
YP_239541.1 NC_007047_p54 protein of an unannotated phage phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 31104 31655
YP_239490.1 NC_007047_p3 protein of an unannotated phage phrog_64 portal protein head and packaging 1 1830 3275
YP_239560.1 NC_007047_p73 protein of an unannotated phage phrog_301 secreted protein other 1 38036 38422
YP_239554.1 NC_007047_p67 protein of an unannotated phage phrog_2532 unknown function unknown function 1 36185 36379
YP_239562.1 NC_007047_p75 protein of an unannotated phage phrog_2409 unknown function unknown function 1 38593 38955
YP_239524.1 NC_007047_p37 protein of an unannotated phage phrog_8 transcriptional regulator transcription regulation -1 25564 25896
YP_239505.1 NC_007047_p18 protein of an unannotated phage singleton unknown function unknown function -1 11530 11691
YP_239561.1 NC_007047_p74 protein of an unannotated phage phrog_152 RinB-like transcriptional activator transcription regulation 1 38419 38592
YP_239548.1 NC_007047_p61 protein of an unannotated phage phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 34315 34719
YP_239511.1 NC_007047_p24 protein of an unannotated phage phrog_6183 minor tail protein tail 1 16556 17827
YP_239488.1 NC_007047_p1 protein of an unannotated phage phrog_51 terminase small subunit head and packaging 1 117 557
YP_239519.1 NC_007047_p32 protein of an unannotated phage phrog_419 unknown function unknown function 1 23056 23253
YP_239547.1 NC_007047_p60 protein of an unannotated phage phrog_433 unknown function unknown function 1 34083 34304
YP_239540.1 NC_007047_p53 protein of an unannotated phage phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 30300 31073
YP_239526.1 NC_007047_p39 protein of an unannotated phage phrog_130 anti-repressor Ant transcription regulation 1 26353 27120
YP_239559.1 NC_007047_p72 protein of an unannotated phage phrog_278 transcriptional regulator transcription regulation 1 37833 38039
YP_239506.1 NC_007047_p19 protein of an unannotated phage phrog_33 distal tail protein Dit tail 1 12446 13378
YP_239492.1 NC_007047_p5 protein of an unannotated phage phrog_172 head scaffolding protein head and packaging 1 4329 4952
YP_239521.1 NC_007047_p34 protein of an unannotated phage phrog_7395 unknown function unknown function -1 23651 24088
YP_239553.1 NC_007047_p66 protein of an unannotated phage phrog_467 unknown function unknown function 1 35796 36188
YP_239494.1 NC_007047_p7 protein of an unannotated phage phrog_341 major tail protein tail 1 5972 6421
YP_239564.1 NC_007047_p77 protein of an unannotated phage phrog_36 transcriptional regulator transcription regulation 1 39126 39548
YP_239518.1 NC_007047_p31 protein of an unannotated phage phrog_1 integrase integration and excision -1 21897 22943
YP_239551.1 NC_007047_p64 protein of an unannotated phage phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 35179 35535
YP_239563.1 NC_007047_p76 protein of an unannotated phage phrog_1367 unknown function unknown function 1 38956 39102
YP_239542.1 NC_007047_p55 protein of an unannotated phage phrog_20102 unknown function unknown function 1 31444 31647
YP_239527.1 NC_007047_p40 protein of an unannotated phage phrog_1796 unknown function unknown function 1 27121 27345
YP_239495.1 NC_007047_p8 protein of an unannotated phage phrog_132 head-tail adaptor connector 1 6378 6764
YP_239502.1 NC_007047_p15 protein of an unannotated phage phrog_58 tail length tape measure protein tail 1 9326 12433
YP_239510.1 NC_007047_p23 protein of an unannotated phage phrog_5240 tail fiber protein tail 1 15496 16539
YP_239513.1 NC_007047_p26 protein of an unannotated phage phrog_759 tail associated cell-wall hydrolase other 1 18348 20234
YP_239509.1 NC_007047_p22 protein of an unannotated phage phrog_8437 unknown function unknown function 1 14792 15484
YP_239543.1 NC_007047_p56 protein of an unannotated phage phrog_398 unknown function unknown function 1 31668 32360
YP_239528.1 NC_007047_p41 protein of an unannotated phage phrog_1534 unknown function unknown function 1 27385 27555
YP_239530.1 NC_007047_p43 protein of an unannotated phage phrog_38378 unknown function unknown function 1 27574 27705
YP_239503.1 NC_007047_p16 protein of an unannotated phage singleton unknown function unknown function -1 10957 11514
YP_239546.1 NC_007047_p59 protein of an unannotated phage phrog_809 transcriptional regulator transcription regulation 1 33912 34070
YP_239515.1 NC_007047_p28 protein of an unannotated phage singleton unknown function unknown function -1 19148 19351
YP_239496.1 NC_007047_p9 protein of an unannotated phage phrog_348 minor head protein head and packaging 1 6761 7075
YP_239539.1 NC_007047_p52 protein of an unannotated phage phrog_253 Mu Gam-like end protection DNA, RNA and nucleotide metabolism 1 29821 30300
YP_239493.1 NC_007047_p6 protein of an unannotated phage phrog_544 major head protein head and packaging 1 4971 5882