Genomic map of Staphylococcus virus 53 (NC_007049)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007049
Definition
Staphylococcus phage 53, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
43883
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
34.07
Number of singletons
2
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_239682.1 NC_007049_p38 protein of an unannotated phage phrog_1176 unknown function unknown function -1 30369 30536
YP_239672.1 NC_007049_p30 protein of an unannotated phage phrog_1125 tail fiber protein tail 1 22506 23678
YP_239683.1 NC_007049_p39 protein of an unannotated phage phrog_4 transcriptional repressor transcription regulation -1 30606 31325
YP_001551742.1 NC_007049_p11 protein of an unannotated phage phrog_348 minor head protein head and packaging 1 7015 7317
YP_239697.1 NC_007049_p52 protein of an unannotated phage phrog_10049 unknown function unknown function 1 35787 35903
YP_239689.1 NC_007049_p45 protein of an unannotated phage phrog_3785 unknown function unknown function 1 33193 33321
YP_239648.1 NC_007049_p8 protein of an unannotated phage phrog_10 major head protein head and packaging 1 5394 6368
YP_239650.1 NC_007049_p10 protein of an unannotated phage phrog_132 head-tail adaptor connector 1 6686 7018
YP_239690.1 NC_007049_p46 protein of an unannotated phage phrog_369 unknown function unknown function 1 33314 33475
YP_239662.1 NC_007049_p21 protein of an unannotated phage phrog_19277 unknown function unknown function 1 15624 15833
YP_239685.1 NC_007049_p41 protein of an unannotated phage phrog_130 anti-repressor Ant transcription regulation 1 31701 32489
YP_239694.1 NC_007049_p49 protein of an unannotated phage phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34051 34674
YP_239708.1 NC_007049_p63 protein of an unannotated phage phrog_467 unknown function unknown function 1 40242 40643
YP_239688.1 NC_007049_p44 protein of an unannotated phage phrog_2222 unknown function unknown function -1 32904 33134
YP_239709.1 NC_007049_p64 protein of an unannotated phage phrog_98 unknown function unknown function 1 40640 40987
YP_239657.1 NC_007049_p18 protein of an unannotated phage phrog_58 tail length tape measure protein tail 1 9477 12941
YP_239719.1 NC_007049_p74 protein of an unannotated phage phrog_36 transcriptional regulator transcription regulation 1 43430 43852
YP_239706.1 NC_007049_p61 protein of an unannotated phage phrog_236 nucleotide kinase other 1 39725 39979
YP_239700.1 NC_007049_p55 protein of an unannotated phage phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 37598 38377
YP_239702.1 NC_007049_p57 protein of an unannotated phage phrog_433 unknown function unknown function 1 38542 38763
YP_239671.1 NC_007049_p29 protein of an unannotated phage phrog_759 tail associated cell-wall hydrolase other 1 20595 22493
YP_239656.1 NC_007049_p17 protein of an unannotated phage phrog_441 tail assembly chaperone tail 1 9116 9460
YP_239679.1 NC_007049_p35 protein of an unannotated phage phrog_95 integrase integration and excision -1 27644 29029
YP_239715.1 NC_007049_p70 protein of an unannotated phage phrog_555 unknown function unknown function 1 42474 42710
YP_239651.1 NC_007049_p12 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 7317 7664
YP_239681.1 NC_007049_p37 protein of an unannotated phage phrog_2039 unknown function unknown function -1 29297 30229
YP_239659.1 NC_007049_p19 protein of an unannotated phage phrog_33 distal tail protein Dit tail 1 12954 13901
YP_239675.1 NC_007049_p32 protein of an unannotated phage phrog_263 holin lysis 1 24135 24437
YP_239652.1 NC_007049_p13 protein of an unannotated phage phrog_176 tail terminator connector 1 7676 8059
YP_239699.1 NC_007049_p54 protein of an unannotated phage phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 36818 37588
YP_239695.1 NC_007049_p50 protein of an unannotated phage phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 34674 35102
YP_239707.1 NC_007049_p62 protein of an unannotated phage phrog_258 virulence associated other 1 39985 40227
YP_239642.1 NC_007049_p2 protein of an unannotated phage phrog_2 terminase large subunit head and packaging 1 517 1860
YP_239664.1 NC_007049_p23 protein of an unannotated phage phrog_36044 unknown function unknown function 1 16826 16942
YP_239641.1 NC_007049_p1 protein of an unannotated phage phrog_51 terminase small subunit head and packaging 1 156 596
YP_239701.1 NC_007049_p56 protein of an unannotated phage phrog_809 transcriptional regulator transcription regulation 1 38371 38529
YP_239714.1 NC_007049_p69 protein of an unannotated phage phrog_1122 unknown function unknown function 1 42278 42481
YP_239661.1 NC_007049_p20 protein of an unannotated phage phrog_663 minor head protein head and packaging 1 13910 15811
YP_239644.1 NC_007049_p4 protein of an unannotated phage phrog_64 portal protein head and packaging 1 1871 3406
YP_239667.1 NC_007049_p25 protein of an unannotated phage phrog_300 tail fiber protein tail 1 19559 19936
YP_239717.1 NC_007049_p72 protein of an unannotated phage phrog_152 RinB-like transcriptional activator transcription regulation 1 43086 43259
YP_239668.1 NC_007049_p26 protein of an unannotated phage phrog_134 unknown function unknown function 1 19937 20119
YP_239645.1 NC_007049_p5 protein of an unannotated phage phrog_115 minor head protein head and packaging 1 3413 4408
YP_239693.1 NC_007049_p48 protein of an unannotated phage phrog_946 unknown function unknown function 1 33837 34058
YP_239680.1 NC_007049_p36 protein of an unannotated phage phrog_2033 excisionase integration and excision 1 29138 29317
YP_239704.1 NC_007049_p59 protein of an unannotated phage phrog_299 unknown function unknown function 1 39180 39365
YP_239713.1 NC_007049_p68 protein of an unannotated phage phrog_278 transcriptional regulator transcription regulation 1 42075 42281
YP_239665.1 NC_007049_p24 protein of an unannotated phage phrog_257 minor tail protein tail 1 17736 19559
YP_239655.1 NC_007049_p16 protein of an unannotated phage phrog_183 tail chaperone protein tail 1 8721 9086
YP_239647.1 NC_007049_p7 protein of an unannotated phage phrog_172 head scaffolding protein head and packaging 1 4760 5380
YP_239674.1 NC_007049_p31 protein of an unannotated phage phrog_1262 unknown function unknown function 1 23684 24079
YP_239643.1 NC_007049_p3 protein of an unannotated phage singleton unknown function unknown function 1 698 838
YP_239654.1 NC_007049_p15 protein of an unannotated phage phrog_31415 unknown function unknown function 1 8217 8321
YP_239646.1 NC_007049_p6 protein of an unannotated phage phrog_1431 unknown function unknown function 1 4481 4651
YP_239716.1 NC_007049_p71 protein of an unannotated phage phrog_301 secreted protein other 1 42703 43089
YP_239692.1 NC_007049_p47 protein of an unannotated phage phrog_401 unknown function unknown function 1 33567 33827
YP_239670.1 NC_007049_p28 protein of an unannotated phage phrog_276 unknown function unknown function 1 20159 20458
YP_239653.1 NC_007049_p14 protein of an unannotated phage phrog_238 major tail protein tail 1 8078 8659
YP_239703.1 NC_007049_p58 protein of an unannotated phage phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38773 39180
YP_239710.1 NC_007049_p65 protein of an unannotated phage phrog_1034 unknown function unknown function 1 40984 41292
YP_239676.1 NC_007049_p33 protein of an unannotated phage phrog_489 endolysin lysis 1 24449 25903
YP_239687.1 NC_007049_p43 protein of an unannotated phage phrog_2312 unknown function unknown function 1 32753 32929
YP_239684.1 NC_007049_p40 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 31467 31685
YP_239711.1 NC_007049_p66 protein of an unannotated phage phrog_266 unknown function unknown function 1 41285 41521
YP_239705.1 NC_007049_p60 protein of an unannotated phage phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 39366 39725
YP_239649.1 NC_007049_p9 protein of an unannotated phage phrog_390 Arc-like repressor transcription regulation 1 6390 6677
YP_239712.1 NC_007049_p67 protein of an unannotated phage phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 41526 42038
YP_239698.1 NC_007049_p53 protein of an unannotated phage phrog_2232 unknown function unknown function -1 35896 36753
YP_239663.1 NC_007049_p22 protein of an unannotated phage phrog_287 minor tail protein tail 1 15826 17736
YP_239669.1 NC_007049_p27 protein of an unannotated phage singleton unknown function unknown function 1 20119 20220
YP_239718.1 NC_007049_p73 protein of an unannotated phage phrog_1367 unknown function unknown function 1 43260 43406
YP_239678.1 NC_007049_p34 protein of an unannotated phage phrog_9659 unknown function unknown function 1 26518 27354
YP_239696.1 NC_007049_p51 protein of an unannotated phage phrog_398 unknown function unknown function 1 35116 35790
YP_239686.1 NC_007049_p42 protein of an unannotated phage phrog_845 unknown function unknown function 1 32506 32700