| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007050 |
Definition |
Staphylococcus phage 85, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus. |
DB of origin |
REFSEQ |
Length |
44283 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
71 |
%GC |
34.58 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_239735.1 | NC_007050_p17 | protein of an unannotated phage | phrog_58 | tail length tape measure protein | tail | 1 | 9584 | 13048 |
| YP_239796.1 | NC_007050_p70 | protein of an unannotated phage | phrog_278 | transcriptional regulator | transcription regulation | 1 | 43586 | 43738 |
| YP_239793.1 | NC_007050_p67 | protein of an unannotated phage | phrog_1034 | unknown function | unknown function | 1 | 42465 | 42773 |
| YP_239794.1 | NC_007050_p68 | protein of an unannotated phage | phrog_266 | unknown function | unknown function | 1 | 42766 | 43002 |
| YP_239769.1 | NC_007050_p44 | protein of an unannotated phage | phrog_38378 | unknown function | unknown function | 1 | 34027 | 34158 |
| YP_239781.1 | NC_007050_p55 | protein of an unannotated phage | phrog_2232 | unknown function | unknown function | -1 | 37405 | 38262 |
| YP_239760.1 | NC_007050_p36 | protein of an unannotated phage | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 30193 | 30873 |
| YP_239723.1 | NC_007050_p4 | protein of an unannotated phage | phrog_115 | minor head protein | head and packaging | 1 | 3611 | 4495 |
| YP_239755.1 | NC_007050_p31 | protein of an unannotated phage | phrog_833 | endolysin | lysis | 1 | 26393 | 27106 |
| YP_239726.1 | NC_007050_p7 | protein of an unannotated phage | phrog_10 | major head protein | head and packaging | 1 | 5501 | 6475 |
| YP_239756.1 | NC_007050_p32 | protein of an unannotated phage | phrog_26562 | unknown function | unknown function | -1 | 27515 | 27652 |
| YP_239778.1 | NC_007050_p52 | protein of an unannotated phage | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36183 | 36611 |
| YP_239788.1 | NC_007050_p62 | protein of an unannotated phage | phrog_201 | Panton-Valentine leukocicin | DNA, RNA and nucleotide metabolism | 1 | 40847 | 41206 |
| YP_239724.1 | NC_007050_p5 | protein of an unannotated phage | phrog_1431 | unknown function | unknown function | 1 | 4568 | 4738 |
| YP_239759.1 | NC_007050_p35 | protein of an unannotated phage | phrog_95 | integrase | integration and excision | -1 | 28601 | 29986 |
| YP_239727.1 | NC_007050_p8 | protein of an unannotated phage | phrog_390 | Arc-like repressor | transcription regulation | 1 | 6497 | 6784 |
| YP_239784.1 | NC_007050_p58 | protein of an unannotated phage | phrog_809 | transcriptional regulator | transcription regulation | 1 | 39852 | 40010 |
| YP_239732.1 | NC_007050_p14 | protein of an unannotated phage | phrog_31415 | unknown function | unknown function | 1 | 8324 | 8428 |
| YP_239748.1 | NC_007050_p26 | protein of an unannotated phage | phrog_1125 | tail fiber protein | tail | 1 | 22614 | 23852 |
| YP_239763.1 | NC_007050_p39 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 31877 | 32086 |
| YP_239746.1 | NC_007050_p25 | protein of an unannotated phage | phrog_759 | tail associated cell-wall hydrolase | other | 1 | 20703 | 22601 |
| YP_239768.1 | NC_007050_p43 | protein of an unannotated phage | phrog_3240 | unknown function | unknown function | -1 | 33997 | 34206 |
| YP_239766.1 | NC_007050_p41 | protein of an unannotated phage | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 33000 | 33767 |
| YP_239777.1 | NC_007050_p51 | protein of an unannotated phage | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 35560 | 36183 |
| YP_239772.1 | NC_007050_p47 | protein of an unannotated phage | phrog_3785 | unknown function | unknown function | 1 | 34702 | 34830 |
| YP_239797.1 | NC_007050_p71 | protein of an unannotated phage | phrog_36 | transcriptional regulator | transcription regulation | 1 | 43826 | 44248 |
| YP_239791.1 | NC_007050_p65 | protein of an unannotated phage | phrog_467 | unknown function | unknown function | 1 | 41723 | 42124 |
| YP_239754.2 | NC_007050_p30 | protein of an unannotated phage | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 25398 | 25943 |
| YP_239730.1 | NC_007050_p12 | protein of an unannotated phage | phrog_176 | tail terminator | connector | 1 | 7783 | 8166 |
| YP_239771.1 | NC_007050_p46 | protein of an unannotated phage | phrog_2222 | unknown function | unknown function | -1 | 34413 | 34643 |
| YP_239787.1 | NC_007050_p61 | protein of an unannotated phage | phrog_299 | unknown function | unknown function | 1 | 40661 | 40846 |
| YP_239782.1 | NC_007050_p56 | protein of an unannotated phage | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 38326 | 39069 |
| YP_239792.1 | NC_007050_p66 | protein of an unannotated phage | phrog_98 | unknown function | unknown function | 1 | 42121 | 42468 |
| YP_239744.1 | NC_007050_p23 | protein of an unannotated phage | phrog_134 | unknown function | unknown function | 1 | 20044 | 20226 |
| YP_239731.1 | NC_007050_p13 | protein of an unannotated phage | phrog_238 | major tail protein | tail | 1 | 8185 | 8766 |
| YP_239758.1 | NC_007050_p34 | protein of an unannotated phage | phrog_7090 | unknown function | unknown function | 1 | 28203 | 28454 |
| YP_239786.1 | NC_007050_p60 | protein of an unannotated phage | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 40254 | 40661 |
| YP_001551743.1 | NC_007050_p10 | protein of an unannotated phage | phrog_348 | minor head protein | head and packaging | 1 | 7122 | 7424 |
| YP_239750.1 | NC_007050_p27 | protein of an unannotated phage | phrog_1262 | unknown function | unknown function | 1 | 23858 | 24253 |
| YP_239776.1 | NC_007050_p50 | protein of an unannotated phage | phrog_946 | unknown function | unknown function | 1 | 35346 | 35567 |
| YP_239734.1 | NC_007050_p16 | protein of an unannotated phage | phrog_441 | tail assembly chaperone | tail | 1 | 9223 | 9567 |
| YP_239783.1 | NC_007050_p57 | protein of an unannotated phage | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 39079 | 39858 |
| YP_239789.1 | NC_007050_p63 | protein of an unannotated phage | phrog_236 | nucleotide kinase | other | 1 | 41206 | 41460 |
| YP_239743.1 | NC_007050_p22 | protein of an unannotated phage | phrog_300 | tail fiber protein | tail | 1 | 19666 | 20043 |
| YP_239779.1 | NC_007050_p53 | protein of an unannotated phage | phrog_398 | unknown function | unknown function | 1 | 36625 | 37299 |
| YP_239720.1 | NC_007050_p1 | protein of an unannotated phage | phrog_51 | terminase small subunit | head and packaging | 1 | 152 | 646 |
| YP_239785.1 | NC_007050_p59 | protein of an unannotated phage | phrog_433 | unknown function | unknown function | 1 | 40023 | 40244 |
| YP_239795.1 | NC_007050_p69 | protein of an unannotated phage | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 43007 | 43549 |
| YP_239762.1 | NC_007050_p38 | protein of an unannotated phage | phrog_8 | transcriptional regulator | transcription regulation | -1 | 31388 | 31714 |
| YP_239745.1 | NC_007050_p24 | protein of an unannotated phage | phrog_276 | unknown function | unknown function | 1 | 20267 | 20566 |
| YP_239761.1 | NC_007050_p37 | protein of an unannotated phage | phrog_87 | metallo-protease | other | -1 | 30905 | 31366 |
| YP_239741.1 | NC_007050_p21 | protein of an unannotated phage | phrog_257 | minor tail protein | tail | 1 | 17843 | 19666 |
| YP_239751.1 | NC_007050_p28 | protein of an unannotated phage | phrog_962 | holin | lysis | 1 | 24309 | 24746 |
| YP_239764.1 | NC_007050_p40 | protein of an unannotated phage | phrog_12047 | ParB-like partition nuclease | DNA, RNA and nucleotide metabolism | 1 | 32126 | 33007 |
| YP_239767.1 | NC_007050_p42 | protein of an unannotated phage | phrog_1534 | unknown function | unknown function | 1 | 33838 | 34008 |
| YP_239757.1 | NC_007050_p33 | protein of an unannotated phage | phrog_7919 | unknown function | unknown function | 1 | 27773 | 28084 |
| YP_239780.1 | NC_007050_p54 | protein of an unannotated phage | phrog_10049 | unknown function | unknown function | 1 | 37296 | 37412 |
| YP_239740.1 | NC_007050_p20 | protein of an unannotated phage | phrog_287 | minor tail protein | tail | 1 | 15933 | 17843 |
| YP_239722.1 | NC_007050_p3 | protein of an unannotated phage | phrog_64 | portal protein | head and packaging | 1 | 1955 | 3493 |
| YP_239790.1 | NC_007050_p64 | protein of an unannotated phage | phrog_258 | virulence associated | other | 1 | 41466 | 41708 |
| YP_239770.1 | NC_007050_p45 | protein of an unannotated phage | phrog_2312 | unknown function | unknown function | 1 | 34262 | 34438 |
| YP_239728.1 | NC_007050_p9 | protein of an unannotated phage | phrog_132 | head-tail adaptor | connector | 1 | 6793 | 7125 |
| YP_239773.1 | NC_007050_p48 | protein of an unannotated phage | phrog_369 | unknown function | unknown function | 1 | 34823 | 34984 |
| YP_239738.1 | NC_007050_p19 | protein of an unannotated phage | phrog_663 | minor head protein | head and packaging | 1 | 14017 | 15918 |
| YP_239729.1 | NC_007050_p11 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 7424 | 7771 |
| YP_239737.1 | NC_007050_p18 | protein of an unannotated phage | phrog_33 | distal tail protein Dit | tail | 1 | 13061 | 14008 |
| YP_239752.1 | NC_007050_p29 | protein of an unannotated phage | phrog_7887 | endolysin | lysis | 1 | 24727 | 25368 |
| YP_239721.1 | NC_007050_p2 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 649 | 1944 |
| YP_239733.1 | NC_007050_p15 | protein of an unannotated phage | phrog_183 | tail chaperone protein | tail | 1 | 8828 | 9193 |
| YP_239725.1 | NC_007050_p6 | protein of an unannotated phage | phrog_172 | head scaffolding protein | head and packaging | 1 | 4873 | 5487 |
| YP_239775.1 | NC_007050_p49 | protein of an unannotated phage | phrog_401 | unknown function | unknown function | 1 | 35076 | 35336 |