| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007055 |
Definition |
Staphylococcus phage 37, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus. |
DB of origin |
REFSEQ |
Length |
43681 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
70 |
%GC |
35.11 |
Number of singletons |
12 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_240126.1 | NC_007055_p49 | protein of an unannotated phage | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 35084 | 35530 |
| YP_240105.1 | NC_007055_p29 | protein of an unannotated phage | phrog_1 | integrase | integration and excision | -1 | 26923 | 27951 |
| YP_240073.1 | NC_007055_p1 | protein of an unannotated phage | phrog_51 | terminase small subunit | head and packaging | 1 | 22 | 453 |
| YP_240130.1 | NC_007055_p53 | protein of an unannotated phage | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 37337 | 38113 |
| YP_240111.1 | NC_007055_p35 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 30317 | 30460 |
| YP_240087.1 | NC_007055_p14 | protein of an unannotated phage | phrog_1404 | tail protein | tail | 1 | 8366 | 8827 |
| YP_240145.1 | NC_007055_p66 | protein of an unannotated phage | phrog_28388 | unknown function | unknown function | 1 | 42270 | 42458 |
| YP_240108.1 | NC_007055_p32 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 29289 | 29522 |
| YP_240123.1 | NC_007055_p46 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 34000 | 34239 |
| YP_240116.1 | NC_007055_p40 | protein of an unannotated phage | phrog_130 | anti-repressor Ant | transcription regulation | 1 | 31965 | 32738 |
| YP_240102.1 | NC_007055_p27 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 24597 | 24764 |
| YP_240096.1 | NC_007055_p22 | protein of an unannotated phage | phrog_2968 | tail protein | tail | 1 | 18954 | 19397 |
| YP_240115.1 | NC_007055_p39 | protein of an unannotated phage | phrog_847 | anti-repressor Ant | transcription regulation | 1 | 31505 | 31951 |
| YP_240144.1 | NC_007055_p65 | protein of an unannotated phage | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 41806 | 42228 |
| YP_240142.1 | NC_007055_p63 | protein of an unannotated phage | phrog_3784 | unknown function | unknown function | 1 | 41142 | 41570 |
| YP_240110.1 | NC_007055_p34 | protein of an unannotated phage | phrog_8870 | unknown function | unknown function | -1 | 29881 | 30303 |
| YP_240094.1 | NC_007055_p20 | protein of an unannotated phage | phrog_1766 | tail fiber protein | tail | 1 | 18456 | 18818 |
| YP_240109.1 | NC_007055_p33 | protein of an unannotated phage | phrog_19469 | unknown function | unknown function | -1 | 29572 | 29829 |
| YP_240148.1 | NC_007055_p69 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 42899 | 43081 |
| YP_240131.1 | NC_007055_p54 | protein of an unannotated phage | phrog_809 | transcriptional regulator | transcription regulation | 1 | 38107 | 38295 |
| YP_240092.1 | NC_007055_p18 | protein of an unannotated phage | phrog_4775 | pre-neck appendage protein | connector | 1 | 14290 | 16953 |
| YP_240128.1 | NC_007055_p51 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 36210 | 36560 |
| YP_240127.1 | NC_007055_p50 | protein of an unannotated phage | phrog_398 | unknown function | unknown function | 1 | 35543 | 36220 |
| YP_240112.1 | NC_007055_p36 | protein of an unannotated phage | phrog_4 | transcriptional repressor | transcription regulation | -1 | 30480 | 31106 |
| YP_240077.1 | NC_007055_p5 | protein of an unannotated phage | phrog_194 | head scaffolding protein | head and packaging | 1 | 4167 | 4760 |
| YP_240076.1 | NC_007055_p4 | protein of an unannotated phage | phrog_115 | minor head protein | head and packaging | 1 | 3096 | 4040 |
| YP_240146.1 | NC_007055_p67 | protein of an unannotated phage | phrog_24716 | unknown function | unknown function | 1 | 42464 | 42730 |
| YP_240088.1 | NC_007055_p15 | protein of an unannotated phage | phrog_58 | tail length tape measure protein | tail | 1 | 8838 | 11843 |
| YP_240103.1 | NC_007055_p28 | protein of an unannotated phage | phrog_635 | endolysin | lysis | 1 | 24792 | 26237 |
| YP_240097.1 | NC_007055_p23 | protein of an unannotated phage | phrog_2990 | unknown function | unknown function | 1 | 19390 | 19779 |
| YP_240135.1 | NC_007055_p57 | protein of an unannotated phage | phrog_201 | Panton-Valentine leukocicin | DNA, RNA and nucleotide metabolism | 1 | 38891 | 39415 |
| YP_240093.1 | NC_007055_p19 | protein of an unannotated phage | phrog_257 | minor tail protein | tail | 1 | 16946 | 18442 |
| YP_240080.1 | NC_007055_p8 | protein of an unannotated phage | phrog_1161 | head-tail adaptor | connector | 1 | 5897 | 6193 |
| YP_240125.1 | NC_007055_p48 | protein of an unannotated phage | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 34449 | 35087 |
| YP_240124.1 | NC_007055_p47 | protein of an unannotated phage | phrog_946 | unknown function | unknown function | 1 | 34232 | 34486 |
| YP_240122.1 | NC_007055_p45 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 33680 | 33895 |
| YP_240101.1 | NC_007055_p26 | protein of an unannotated phage | phrog_962 | holin | lysis | 1 | 24389 | 24811 |
| YP_240114.1 | NC_007055_p38 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 31258 | 31485 |
| YP_240079.1 | NC_007055_p7 | protein of an unannotated phage | phrog_390 | Arc-like repressor | transcription regulation | 1 | 5616 | 5897 |
| YP_240129.1 | NC_007055_p52 | protein of an unannotated phage | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 36553 | 37335 |
| YP_240137.1 | NC_007055_p58 | protein of an unannotated phage | phrog_1689 | nucleotide kinase | other | 1 | 39416 | 39886 |
| YP_240132.1 | NC_007055_p55 | protein of an unannotated phage | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 38279 | 38686 |
| YP_240089.1 | NC_007055_p16 | protein of an unannotated phage | phrog_33 | distal tail protein Dit | tail | 1 | 11862 | 12776 |
| YP_240141.1 | NC_007055_p62 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 40946 | 41152 |
| YP_240106.1 | NC_007055_p30 | protein of an unannotated phage | phrog_5059 | unknown function | unknown function | -1 | 28015 | 28803 |
| YP_240084.1 | NC_007055_p11 | protein of an unannotated phage | phrog_176 | tail terminator | connector | 1 | 6942 | 7364 |
| YP_240078.1 | NC_007055_p6 | protein of an unannotated phage | phrog_544 | major head protein | head and packaging | 1 | 4779 | 5603 |
| YP_240143.1 | NC_007055_p64 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 41570 | 41806 |
| YP_240095.1 | NC_007055_p21 | protein of an unannotated phage | phrog_134 | unknown function | unknown function | 1 | 18808 | 18942 |
| YP_240085.1 | NC_007055_p12 | protein of an unannotated phage | phrog_238 | major tail protein | tail | 1 | 7368 | 7931 |
| YP_240086.1 | NC_007055_p13 | protein of an unannotated phage | phrog_183 | tail chaperone protein | tail | 1 | 7989 | 8486 |
| YP_240099.1 | NC_007055_p24 | protein of an unannotated phage | phrog_759 | tail associated cell-wall hydrolase | other | 1 | 19829 | 21748 |
| YP_240075.1 | NC_007055_p3 | protein of an unannotated phage | phrog_64 | portal protein | head and packaging | 1 | 1718 | 3124 |
| YP_240118.1 | NC_007055_p42 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 32988 | 33128 |
| YP_240091.1 | NC_007055_p17 | protein of an unannotated phage | phrog_326 | tail protein with endopeptidase domain | other | 1 | 12785 | 14287 |
| YP_240140.1 | NC_007055_p61 | protein of an unannotated phage | phrog_98 | unknown function | unknown function | 1 | 40552 | 40959 |
| YP_240107.1 | NC_007055_p31 | protein of an unannotated phage | phrog_17771 | unknown function | unknown function | -1 | 28816 | 29271 |
| YP_240100.1 | NC_007055_p25 | protein of an unannotated phage | phrog_32409 | tail fiber protein | tail | 1 | 21761 | 24346 |
| YP_240082.1 | NC_007055_p10 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6517 | 6930 |
| YP_240120.1 | NC_007055_p44 | protein of an unannotated phage | phrog_823 | unknown function | unknown function | 1 | 33365 | 33667 |
| YP_240119.1 | NC_007055_p43 | protein of an unannotated phage | phrog_2222 | unknown function | unknown function | -1 | 33088 | 33318 |
| YP_240147.1 | NC_007055_p68 | protein of an unannotated phage | phrog_152 | RinB-like transcriptional activator | transcription regulation | 1 | 42723 | 42899 |
| YP_240139.1 | NC_007055_p60 | protein of an unannotated phage | phrog_98 | unknown function | unknown function | 1 | 40071 | 40535 |
| YP_240074.1 | NC_007055_p2 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 453 | 1712 |
| YP_240113.1 | NC_007055_p37 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 31238 | 31396 |
| YP_240149.1 | NC_007055_p70 | protein of an unannotated phage | phrog_36 | transcriptional regulator | transcription regulation | 1 | 43074 | 43478 |
| YP_240134.1 | NC_007055_p56 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 38687 | 38878 |
| YP_240117.1 | NC_007055_p41 | protein of an unannotated phage | phrog_1796 | unknown function | unknown function | 1 | 32739 | 32975 |
| YP_240081.1 | NC_007055_p9 | protein of an unannotated phage | phrog_25 | head closure Hc1 | connector | 1 | 6195 | 6530 |
| YP_240138.1 | NC_007055_p59 | protein of an unannotated phage | phrog_3683 | unknown function | unknown function | 1 | 39887 | 40081 |