| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007056 |
Definition |
Staphylococcus phage EW, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus. |
DB of origin |
REFSEQ |
Length |
45286 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
77 |
%GC |
35.99 |
Number of singletons |
15 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_240218.1 | NC_007056_p69 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 42398 | 42637 |
| YP_240177.1 | NC_007056_p28 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 19335 | 19592 |
| YP_240171.1 | NC_007056_p22 | protein of an unannotated phage | phrog_14029 | unknown function | unknown function | 1 | 14856 | 16586 |
| YP_240224.1 | NC_007056_p75 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 44222 | 44329 |
| YP_240165.1 | NC_007056_p16 | protein of an unannotated phage | phrog_1404 | tail protein | tail | 1 | 8818 | 9096 |
| YP_240179.1 | NC_007056_p30 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 21761 | 22012 |
| YP_240211.1 | NC_007056_p62 | protein of an unannotated phage | phrog_140 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 40260 | 40676 |
| YP_240156.1 | NC_007056_p7 | protein of an unannotated phage | phrog_194 | head scaffolding protein | head and packaging | 1 | 4451 | 5047 |
| YP_240210.1 | NC_007056_p61 | protein of an unannotated phage | phrog_3161 | unknown function | unknown function | 1 | 40055 | 40273 |
| YP_240188.1 | NC_007056_p39 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 30178 | 30387 |
| YP_240172.1 | NC_007056_p23 | protein of an unannotated phage | phrog_257 | minor tail protein | tail | 1 | 16601 | 18337 |
| YP_240196.1 | NC_007056_p47 | protein of an unannotated phage | phrog_7948 | unknown function | unknown function | -1 | 33886 | 34545 |
| YP_240201.1 | NC_007056_p52 | protein of an unannotated phage | phrog_3119 | unknown function | unknown function | 1 | 35390 | 35659 |
| YP_240184.1 | NC_007056_p35 | protein of an unannotated phage | phrog_1 | integrase | integration and excision | -1 | 27229 | 28263 |
| YP_240169.1 | NC_007056_p20 | protein of an unannotated phage | phrog_663 | minor head protein | head and packaging | 1 | 12985 | 14844 |
| YP_240219.1 | NC_007056_p70 | protein of an unannotated phage | phrog_419 | unknown function | unknown function | 1 | 42621 | 42896 |
| YP_240167.1 | NC_007056_p18 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 11210 | 11320 |
| YP_240220.1 | NC_007056_p71 | protein of an unannotated phage | phrog_452 | endonuclease | DNA, RNA and nucleotide metabolism | 1 | 42880 | 43239 |
| YP_240193.1 | NC_007056_p44 | protein of an unannotated phage | phrog_373 | anti-repressor | transcription regulation | 1 | 32625 | 33401 |
| YP_240186.1 | NC_007056_p37 | protein of an unannotated phage | phrog_87 | metallo-protease | other | -1 | 29196 | 29660 |
| YP_240157.1 | NC_007056_p8 | protein of an unannotated phage | phrog_544 | major head protein | head and packaging | 1 | 5064 | 5891 |
| YP_240174.1 | NC_007056_p25 | protein of an unannotated phage | phrog_134 | unknown function | unknown function | 1 | 18663 | 18797 |
| YP_240209.1 | NC_007056_p60 | protein of an unannotated phage | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 38820 | 40058 |
| YP_240170.1 | NC_007056_p21 | protein of an unannotated phage | phrog_19277 | unknown function | unknown function | 1 | 14678 | 14806 |
| YP_240197.1 | NC_007056_p48 | protein of an unannotated phage | phrog_26514 | unknown function | unknown function | 1 | 34084 | 34290 |
| YP_240180.1 | NC_007056_p31 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 22667 | 22792 |
| YP_240183.1 | NC_007056_p34 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 24701 | 24808 |
| YP_240163.1 | NC_007056_p14 | protein of an unannotated phage | phrog_238 | major tail protein | tail | 1 | 7659 | 8201 |
| YP_240162.1 | NC_007056_p13 | protein of an unannotated phage | phrog_176 | tail terminator | connector | 1 | 7233 | 7655 |
| YP_240185.1 | NC_007056_p36 | protein of an unannotated phage | phrog_2657 | transcriptional regulator | transcription regulation | -1 | 28325 | 29158 |
| YP_240161.1 | NC_007056_p12 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6814 | 7221 |
| YP_240155.1 | NC_007056_p6 | protein of an unannotated phage | phrog_2881 | dCMP hydroxymethylase | DNA, RNA and nucleotide metabolism | 1 | 4112 | 4336 |
| YP_240151.1 | NC_007056_p2 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 396 | 1661 |
| YP_240203.1 | NC_007056_p54 | protein of an unannotated phage | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 35871 | 36494 |
| YP_240225.1 | NC_007056_p76 | protein of an unannotated phage | phrog_1367 | unknown function | unknown function | 1 | 44330 | 44479 |
| YP_240199.1 | NC_007056_p50 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 35003 | 35158 |
| YP_240178.1 | NC_007056_p29 | protein of an unannotated phage | phrog_19519 | neck protein | connector | 1 | 21153 | 23879 |
| YP_240223.1 | NC_007056_p74 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 44110 | 44217 |
| YP_240207.1 | NC_007056_p58 | protein of an unannotated phage | phrog_186 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 37771 | 38475 |
| YP_240195.1 | NC_007056_p46 | protein of an unannotated phage | phrog_1263 | unknown function | unknown function | 1 | 33733 | 33876 |
| YP_240158.1 | NC_007056_p9 | protein of an unannotated phage | phrog_390 | Arc-like repressor | transcription regulation | 1 | 5910 | 6191 |
| YP_240206.1 | NC_007056_p57 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 37572 | 37778 |
| YP_240159.1 | NC_007056_p10 | protein of an unannotated phage | phrog_1161 | head-tail adaptor | connector | 1 | 6191 | 6487 |
| YP_240192.1 | NC_007056_p43 | protein of an unannotated phage | phrog_3240 | unknown function | unknown function | -1 | 32329 | 32568 |
| YP_240182.1 | NC_007056_p33 | protein of an unannotated phage | phrog_635 | endolysin | lysis | 1 | 24340 | 25788 |
| YP_240190.1 | NC_007056_p41 | protein of an unannotated phage | phrog_1033 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 31330 | 32100 |
| YP_240176.1 | NC_007056_p27 | protein of an unannotated phage | phrog_759 | tail associated cell-wall hydrolase | other | 1 | 19244 | 21136 |
| YP_240150.1 | NC_007056_p1 | protein of an unannotated phage | phrog_2538 | terminase small subunit | head and packaging | 1 | 32 | 412 |
| YP_240189.1 | NC_007056_p40 | protein of an unannotated phage | phrog_12047 | ParB-like partition nuclease | DNA, RNA and nucleotide metabolism | 1 | 30426 | 31337 |
| YP_240154.1 | NC_007056_p5 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 3974 | 4108 |
| YP_240217.1 | NC_007056_p68 | protein of an unannotated phage | phrog_467 | unknown function | unknown function | 1 | 42021 | 42401 |
| YP_240200.1 | NC_007056_p51 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 35229 | 35348 |
| YP_240214.1 | NC_007056_p65 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 41293 | 41601 |
| YP_240152.1 | NC_007056_p3 | protein of an unannotated phage | phrog_64 | portal protein | head and packaging | 1 | 1667 | 3091 |
| YP_240198.1 | NC_007056_p49 | protein of an unannotated phage | phrog_823 | unknown function | unknown function | 1 | 34693 | 34998 |
| YP_240213.1 | NC_007056_p64 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 41106 | 41300 |
| YP_240191.1 | NC_007056_p42 | protein of an unannotated phage | phrog_1534 | unknown function | unknown function | 1 | 32160 | 32339 |
| YP_240208.1 | NC_007056_p59 | protein of an unannotated phage | phrog_2289 | helicase loader | DNA, RNA and nucleotide metabolism | 1 | 38480 | 38827 |
| YP_240205.1 | NC_007056_p56 | protein of an unannotated phage | phrog_398 | unknown function | unknown function | 1 | 36904 | 37575 |
| YP_240166.1 | NC_007056_p17 | protein of an unannotated phage | phrog_58 | tail length tape measure protein | tail | 1 | 9100 | 12027 |
| YP_240222.1 | NC_007056_p73 | protein of an unannotated phage | phrog_135 | dUTPase | DNA, RNA and nucleotide metabolism | 1 | 43659 | 44168 |
| YP_240153.1 | NC_007056_p4 | protein of an unannotated phage | phrog_115 | minor head protein | head and packaging | 1 | 3054 | 4001 |
| YP_240202.1 | NC_007056_p53 | protein of an unannotated phage | phrog_946 | unknown function | unknown function | 1 | 35656 | 35874 |
| YP_240168.1 | NC_007056_p19 | protein of an unannotated phage | phrog_33 | distal tail protein Dit | tail | 1 | 12040 | 12972 |
| YP_240164.1 | NC_007056_p15 | protein of an unannotated phage | phrog_183 | tail chaperone protein | tail | 1 | 8264 | 8767 |
| YP_240175.1 | NC_007056_p26 | protein of an unannotated phage | phrog_276 | unknown function | unknown function | 1 | 18820 | 19116 |
| YP_240226.1 | NC_007056_p77 | protein of an unannotated phage | phrog_36 | transcriptional regulator | transcription regulation | 1 | 44479 | 44898 |
| YP_240204.1 | NC_007056_p55 | protein of an unannotated phage | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 36494 | 36892 |
| YP_240216.1 | NC_007056_p67 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 41823 | 42002 |
| YP_240194.1 | NC_007056_p45 | protein of an unannotated phage | phrog_2312 | unknown function | unknown function | 1 | 33436 | 33585 |
| YP_240221.1 | NC_007056_p72 | protein of an unannotated phage | phrog_4872 | unknown function | unknown function | 1 | 43487 | 43648 |
| YP_240187.1 | NC_007056_p38 | protein of an unannotated phage | phrog_8 | transcriptional regulator | transcription regulation | -1 | 29684 | 30013 |
| YP_240160.1 | NC_007056_p11 | protein of an unannotated phage | phrog_25 | head closure Hc1 | connector | 1 | 6492 | 6827 |
| YP_240173.1 | NC_007056_p24 | protein of an unannotated phage | phrog_1766 | tail fiber protein | tail | 1 | 18334 | 18666 |
| YP_240215.1 | NC_007056_p66 | protein of an unannotated phage | phrog_433 | unknown function | unknown function | 1 | 41598 | 41810 |
| YP_240212.1 | NC_007056_p63 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 40678 | 41106 |
| YP_240181.1 | NC_007056_p32 | protein of an unannotated phage | phrog_962 | holin | lysis | 1 | 23925 | 24359 |