| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007057 |
Definition |
Staphylococcus phage 96, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus. |
DB of origin |
REFSEQ |
Length |
43576 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
74 |
%GC |
35 |
Number of singletons |
2 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_240255.1 | NC_007057_p25 | protein of an unannotated phage | phrog_759 | tail associated cell-wall hydrolase | other | 1 | 19961 | 21835 |
| YP_240259.1 | NC_007057_p29 | protein of an unannotated phage | phrog_489 | endolysin | lysis | 1 | 23790 | 25244 |
| YP_240296.1 | NC_007057_p66 | protein of an unannotated phage | phrog_4872 | unknown function | unknown function | 1 | 41082 | 41243 |
| YP_240284.1 | NC_007057_p54 | protein of an unannotated phage | phrog_299 | unknown function | unknown function | 1 | 37835 | 38020 |
| YP_240267.1 | NC_007057_p37 | protein of an unannotated phage | phrog_8 | transcriptional regulator | transcription regulation | -1 | 29505 | 29831 |
| YP_240256.1 | NC_007057_p26 | protein of an unannotated phage | phrog_1125 | tail fiber protein | tail | 1 | 21848 | 23020 |
| YP_240258.1 | NC_007057_p28 | protein of an unannotated phage | phrog_263 | holin | lysis | 1 | 23477 | 23779 |
| YP_240289.1 | NC_007057_p59 | protein of an unannotated phage | phrog_258 | virulence associated | other | 1 | 39124 | 39366 |
| YP_240252.1 | NC_007057_p22 | protein of an unannotated phage | phrog_300 | tail fiber protein | tail | 1 | 18930 | 19307 |
| YP_240280.1 | NC_007057_p50 | protein of an unannotated phage | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 35737 | 36978 |
| YP_240305.1 | NC_007057_p74 | protein of an unannotated phage | phrog_1058 | unknown function | unknown function | 1 | 42983 | 43384 |
| YP_240270.1 | NC_007057_p40 | protein of an unannotated phage | phrog_5920 | unknown function | unknown function | 1 | 30992 | 31201 |
| YP_240230.1 | NC_007057_p4 | protein of an unannotated phage | phrog_115 | minor head protein | head and packaging | 1 | 3261 | 4214 |
| YP_240229.1 | NC_007057_p3 | protein of an unannotated phage | phrog_64 | portal protein | head and packaging | 1 | 1868 | 3292 |
| YP_240233.1 | NC_007057_p6 | protein of an unannotated phage | phrog_172 | head scaffolding protein | head and packaging | 1 | 4525 | 5109 |
| YP_240248.1 | NC_007057_p19 | protein of an unannotated phage | phrog_663 | minor head protein | head and packaging | 1 | 13310 | 15196 |
| YP_240275.1 | NC_007057_p45 | protein of an unannotated phage | phrog_124 | Sak4-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32589 | 33368 |
| YP_240276.1 | NC_007057_p46 | protein of an unannotated phage | phrog_378 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 33398 | 33952 |
| YP_240302.1 | NC_007057_p71 | protein of an unannotated phage | phrog_555 | unknown function | unknown function | 1 | 42197 | 42433 |
| YP_240301.1 | NC_007057_p70 | protein of an unannotated phage | phrog_3885 | unknown function | unknown function | 1 | 41991 | 42200 |
| YP_240298.1 | NC_007057_p68 | protein of an unannotated phage | phrog_278 | transcriptional regulator | transcription regulation | 1 | 41828 | 42016 |
| YP_240292.1 | NC_007057_p62 | protein of an unannotated phage | phrog_742 | acetyltransferase | other | 1 | 39961 | 40392 |
| YP_240263.1 | NC_007057_p33 | protein of an unannotated phage | phrog_1 | integrase | integration and excision | -1 | 26896 | 27945 |
| YP_240300.1 | NC_007057_p69 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 41877 | 41978 |
| YP_240228.1 | NC_007057_p2 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 648 | 1871 |
| YP_240232.1 | NC_007057_p5 | protein of an unannotated phage | phrog_2881 | dCMP hydroxymethylase | DNA, RNA and nucleotide metabolism | 1 | 4216 | 4422 |
| YP_240293.1 | NC_007057_p63 | protein of an unannotated phage | phrog_266 | unknown function | unknown function | 1 | 40385 | 40636 |
| YP_240278.1 | NC_007057_p48 | protein of an unannotated phage | phrog_6493 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 34629 | 35384 |
| YP_240286.1 | NC_007057_p56 | protein of an unannotated phage | phrog_201 | Panton-Valentine leukocicin | DNA, RNA and nucleotide metabolism | 1 | 38290 | 38649 |
| YP_240283.1 | NC_007057_p53 | protein of an unannotated phage | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 37426 | 37830 |
| YP_240297.1 | NC_007057_p67 | protein of an unannotated phage | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 41258 | 41791 |
| YP_240235.1 | NC_007057_p8 | protein of an unannotated phage | phrog_2406 | unknown function | unknown function | 1 | 6049 | 6195 |
| YP_240247.1 | NC_007057_p18 | protein of an unannotated phage | phrog_28208 | tail protein | tail | 1 | 12943 | 13299 |
| YP_240250.1 | NC_007057_p21 | protein of an unannotated phage | phrog_257 | minor tail protein | tail | 1 | 17107 | 18930 |
| YP_240257.1 | NC_007057_p27 | protein of an unannotated phage | phrog_1262 | unknown function | unknown function | 1 | 23026 | 23421 |
| YP_240260.1 | NC_007057_p30 | protein of an unannotated phage | phrog_20463 | unknown function | unknown function | -1 | 25420 | 25521 |
| YP_240285.1 | NC_007057_p55 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 38021 | 38278 |
| YP_240290.1 | NC_007057_p60 | protein of an unannotated phage | phrog_467 | unknown function | unknown function | 1 | 39381 | 39773 |
| YP_240282.1 | NC_007057_p52 | protein of an unannotated phage | phrog_433 | unknown function | unknown function | 1 | 37194 | 37415 |
| YP_240249.1 | NC_007057_p20 | protein of an unannotated phage | phrog_287 | minor tail protein | tail | 1 | 15209 | 17107 |
| YP_240236.1 | NC_007057_p9 | protein of an unannotated phage | phrog_1161 | head-tail adaptor | connector | 1 | 6201 | 6551 |
| YP_240253.1 | NC_007057_p23 | protein of an unannotated phage | phrog_134 | unknown function | unknown function | 1 | 19308 | 19484 |
| YP_240271.1 | NC_007057_p41 | protein of an unannotated phage | phrog_369 | unknown function | unknown function | 1 | 31215 | 31376 |
| YP_240242.1 | NC_007057_p14 | protein of an unannotated phage | phrog_183 | tail chaperone protein | tail | 1 | 8502 | 8867 |
| YP_240273.1 | NC_007057_p43 | protein of an unannotated phage | phrog_401 | unknown function | unknown function | 1 | 31779 | 32039 |
| YP_240240.1 | NC_007057_p12 | protein of an unannotated phage | phrog_176 | tail terminator | connector | 1 | 7311 | 7736 |
| YP_240238.1 | NC_007057_p11 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6849 | 7298 |
| YP_240291.1 | NC_007057_p61 | protein of an unannotated phage | phrog_2532 | unknown function | unknown function | 1 | 39770 | 39961 |
| YP_240269.1 | NC_007057_p39 | protein of an unannotated phage | phrog_463 | anti-repressor | transcription regulation | 1 | 30242 | 30967 |
| YP_240295.1 | NC_007057_p65 | protein of an unannotated phage | phrog_8718 | unknown function | unknown function | 1 | 40800 | 41081 |
| YP_240277.1 | NC_007057_p47 | protein of an unannotated phage | phrog_398 | unknown function | unknown function | 1 | 33965 | 34636 |
| YP_240227.1 | NC_007057_p1 | protein of an unannotated phage | phrog_1595 | terminase small subunit | head and packaging | 1 | 194 | 655 |
| YP_240261.1 | NC_007057_p31 | protein of an unannotated phage | phrog_1529 | unknown function | unknown function | 1 | 25992 | 26198 |
| YP_240243.1 | NC_007057_p15 | protein of an unannotated phage | phrog_58 | tail length tape measure protein | tail | 1 | 9200 | 12343 |
| YP_240288.1 | NC_007057_p58 | protein of an unannotated phage | phrog_987 | unknown function | unknown function | 1 | 38909 | 39109 |
| YP_240268.1 | NC_007057_p38 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 29994 | 30203 |
| YP_240274.1 | NC_007057_p44 | protein of an unannotated phage | phrog_2205 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 32052 | 32588 |
| YP_240254.1 | NC_007057_p24 | protein of an unannotated phage | phrog_276 | unknown function | unknown function | 1 | 19525 | 19824 |
| YP_001551741.1 | NC_007057_p16 | protein of an unannotated phage | phrog_33 | distal tail protein Dit | tail | 1 | 12358 | 13299 |
| YP_240246.1 | NC_007057_p17 | protein of an unannotated phage | singleton | unknown function | unknown function | 1 | 12764 | 12946 |
| YP_240303.1 | NC_007057_p72 | protein of an unannotated phage | phrog_301 | secreted protein | other | 1 | 42423 | 42809 |
| YP_240264.1 | NC_007057_p34 | protein of an unannotated phage | phrog_4037 | unknown function | unknown function | -1 | 28006 | 28509 |
| YP_240262.1 | NC_007057_p32 | protein of an unannotated phage | phrog_16907 | unknown function | unknown function | 1 | 26213 | 26413 |
| YP_240272.1 | NC_007057_p42 | protein of an unannotated phage | phrog_2182 | unknown function | unknown function | 1 | 31469 | 31798 |
| YP_240237.1 | NC_007057_p10 | protein of an unannotated phage | phrog_25 | head closure Hc1 | connector | 1 | 6554 | 6898 |
| YP_240241.1 | NC_007057_p13 | protein of an unannotated phage | phrog_238 | major tail protein | tail | 1 | 7737 | 8294 |
| YP_240266.1 | NC_007057_p36 | protein of an unannotated phage | phrog_87 | metallo-protease | other | -1 | 29025 | 29483 |
| YP_240279.1 | NC_007057_p49 | protein of an unannotated phage | phrog_2289 | helicase loader | DNA, RNA and nucleotide metabolism | 1 | 35384 | 35740 |
| YP_240234.1 | NC_007057_p7 | protein of an unannotated phage | phrog_10 | major head protein | head and packaging | 1 | 5126 | 6040 |
| YP_240287.1 | NC_007057_p57 | protein of an unannotated phage | phrog_236 | nucleotide kinase | other | 1 | 38649 | 38906 |
| YP_240294.1 | NC_007057_p64 | protein of an unannotated phage | phrog_3898 | unknown function | unknown function | 1 | 40626 | 40799 |
| YP_240281.1 | NC_007057_p51 | protein of an unannotated phage | phrog_3161 | unknown function | unknown function | 1 | 36975 | 37190 |
| YP_240304.1 | NC_007057_p73 | protein of an unannotated phage | phrog_152 | RinB-like transcriptional activator | transcription regulation | 1 | 42809 | 42982 |
| YP_240265.1 | NC_007057_p35 | protein of an unannotated phage | phrog_5375 | unknown function | unknown function | -1 | 28513 | 29004 |