Genomic map of Staphylococcus phage ROSA (NC_007058)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007058
Definition
Staphylococcus phage ROSA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus; unclassified Phietavirus.
DB of origin
REFSEQ
Length
43155
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
74
%GC
35.05
Number of singletons
3
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_240343.1 NC_007058_p38 protein of an unannotated phage phrog_8835 unknown function unknown function -1 30326 30571
YP_240340.1 NC_007058_p35 protein of an unannotated phage phrog_8 transcriptional regulator transcription regulation -1 29422 29745
YP_240322.1 NC_007058_p17 protein of an unannotated phage phrog_33 distal tail protein Dit tail 1 13083 14024
YP_240317.1 NC_007058_p12 protein of an unannotated phage phrog_176 tail terminator connector 1 8036 8461
YP_240319.1 NC_007058_p14 protein of an unannotated phage phrog_183 tail chaperone protein tail 1 9086 9592
YP_240336.1 NC_007058_p31 protein of an unannotated phage phrog_2033 excisionase integration and excision 1 28131 28310
YP_240323.1 NC_007058_p18 protein of an unannotated phage phrog_663 minor head protein head and packaging 1 14035 15921
YP_240358.1 NC_007058_p53 protein of an unannotated phage phrog_2232 unknown function unknown function -1 34814 35671
YP_240363.1 NC_007058_p58 protein of an unannotated phage phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 37691 38098
YP_240375.1 NC_007058_p70 protein of an unannotated phage phrog_301 secreted protein other 1 41457 41843
YP_240337.1 NC_007058_p32 protein of an unannotated phage singleton unknown function unknown function -1 28325 28432
YP_240328.1 NC_007058_p23 protein of an unannotated phage phrog_276 unknown function unknown function 1 20250 20549
YP_240356.1 NC_007058_p51 protein of an unannotated phage phrog_398 unknown function unknown function 1 34217 34708
YP_240372.1 NC_007058_p67 protein of an unannotated phage phrog_1235 unknown function unknown function 1 40447 40617
YP_240362.1 NC_007058_p57 protein of an unannotated phage phrog_433 unknown function unknown function 1 37460 37681
YP_240369.1 NC_007058_p64 protein of an unannotated phage phrog_98 unknown function unknown function 1 39561 39908
YP_240379.1 NC_007058_p74 protein of an unannotated phage phrog_36 transcriptional regulator transcription regulation 1 42550 42972
YP_240355.1 NC_007058_p50 protein of an unannotated phage singleton unknown function unknown function 1 34036 34224
YP_240325.1 NC_007058_p20 protein of an unannotated phage phrog_257 minor tail protein tail 1 17832 19655
YP_240335.1 NC_007058_p30 protein of an unannotated phage phrog_1 integrase integration and excision -1 26815 28020
YP_240349.1 NC_007058_p44 protein of an unannotated phage phrog_401 unknown function unknown function 1 32171 32431
YP_240352.1 NC_007058_p47 protein of an unannotated phage phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 33472 34023
YP_240334.1 NC_007058_p29 protein of an unannotated phage singleton unknown function unknown function 1 25630 25743
YP_240306.1 NC_007058_p1 protein of an unannotated phage phrog_2538 terminase small subunit head and packaging 1 140 520
YP_240364.1 NC_007058_p59 protein of an unannotated phage phrog_299 unknown function unknown function 1 38098 38283
YP_240314.1 NC_007058_p9 protein of an unannotated phage phrog_25 head closure Hc1 connector 1 6318 6653
YP_240342.1 NC_007058_p37 protein of an unannotated phage phrog_6431 unknown function unknown function 1 30172 30333
YP_240326.1 NC_007058_p21 protein of an unannotated phage phrog_300 tail fiber protein tail 1 19655 20032
YP_240311.1 NC_007058_p6 protein of an unannotated phage phrog_544 major head protein head and packaging 1 4844 5668
YP_240376.1 NC_007058_p71 protein of an unannotated phage phrog_152 RinB-like transcriptional activator transcription regulation 1 41840 42013
YP_240329.1 NC_007058_p24 protein of an unannotated phage phrog_759 tail associated cell-wall hydrolase other 1 20686 22560
YP_240370.1 NC_007058_p65 protein of an unannotated phage phrog_1034 unknown function unknown function 1 39905 40213
YP_240333.1 NC_007058_p28 protein of an unannotated phage phrog_489 endolysin lysis 1 24516 25970
YP_240354.1 NC_007058_p49 protein of an unannotated phage phrog_20102 unknown function unknown function 1 33812 34015
YP_240344.1 NC_007058_p39 protein of an unannotated phage phrog_63 anti-repressor Ant transcription regulation 1 30627 31379
YP_240324.1 NC_007058_p19 protein of an unannotated phage phrog_287 minor tail protein tail 1 15934 17832
YP_240310.1 NC_007058_p5 protein of an unannotated phage phrog_194 head scaffolding protein head and packaging 1 4223 4822
YP_240338.1 NC_007058_p33 protein of an unannotated phage phrog_5375 unknown function unknown function -1 28436 28927
YP_240350.1 NC_007058_p45 protein of an unannotated phage phrog_946 unknown function unknown function 1 32441 32662
YP_240309.1 NC_007058_p4 protein of an unannotated phage phrog_115 minor head protein head and packaging 1 3151 4110
YP_240345.1 NC_007058_p40 protein of an unannotated phage phrog_4309 unknown function unknown function 1 31395 31613
YP_240313.1 NC_007058_p8 protein of an unannotated phage phrog_1161 head-tail adaptor connector 1 6011 6325
YP_240320.1 NC_007058_p15 protein of an unannotated phage phrog_12040 unknown function unknown function 1 9772 9921
YP_240367.1 NC_007058_p62 protein of an unannotated phage phrog_258 virulence associated other 1 38897 39145
YP_240316.1 NC_007058_p11 protein of an unannotated phage phrog_374 HNH endonuclease DNA, RNA and nucleotide metabolism 1 6991 7650
YP_240374.1 NC_007058_p69 protein of an unannotated phage phrog_2334 transcriptional regulator transcription regulation 1 41177 41464
YP_240378.1 NC_007058_p73 protein of an unannotated phage phrog_1367 unknown function unknown function 1 42380 42526
YP_240361.1 NC_007058_p56 protein of an unannotated phage phrog_809 transcriptional regulator transcription regulation 1 37289 37447
YP_240353.1 NC_007058_p48 protein of an unannotated phage phrog_36124 unknown function unknown function -1 33535 33654
YP_240368.1 NC_007058_p63 protein of an unannotated phage phrog_467 unknown function unknown function 1 39160 39564
YP_240321.1 NC_007058_p16 protein of an unannotated phage phrog_58 tail length tape measure protein tail 1 9925 13068
YP_240348.1 NC_007058_p43 protein of an unannotated phage phrog_13915 unknown function unknown function -1 31938 32048
YP_240359.1 NC_007058_p54 protein of an unannotated phage phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 35736 36506
YP_240357.1 NC_007058_p52 protein of an unannotated phage phrog_10049 unknown function unknown function 1 34705 34821
YP_240346.1 NC_007058_p41 protein of an unannotated phage phrog_534 DNA binding protein DNA, RNA and nucleotide metabolism 1 31643 31906
YP_240318.1 NC_007058_p13 protein of an unannotated phage phrog_238 major tail protein tail 1 8462 9019
YP_240307.1 NC_007058_p2 protein of an unannotated phage phrog_2 terminase large subunit head and packaging 1 504 1769
YP_240351.1 NC_007058_p46 protein of an unannotated phage phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 32655 33443
YP_240339.1 NC_007058_p34 protein of an unannotated phage phrog_87 metallo-protease other -1 28948 29409
YP_240341.1 NC_007058_p36 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 29909 30157
YP_240308.1 NC_007058_p3 protein of an unannotated phage phrog_64 portal protein head and packaging 1 1770 3194
YP_240330.1 NC_007058_p25 protein of an unannotated phage phrog_1125 tail fiber protein tail 1 22573 23745
YP_240360.1 NC_007058_p55 protein of an unannotated phage phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 36516 37295
YP_240315.1 NC_007058_p10 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 6604 6906
YP_240312.1 NC_007058_p7 protein of an unannotated phage phrog_390 Arc-like repressor transcription regulation 1 5685 6011
YP_240377.1 NC_007058_p72 protein of an unannotated phage phrog_2409 unknown function unknown function 1 42014 42379
YP_240366.1 NC_007058_p61 protein of an unannotated phage phrog_236 nucleotide kinase other 1 38643 38897
YP_240331.1 NC_007058_p26 protein of an unannotated phage phrog_1262 unknown function unknown function 1 23751 24146
YP_240327.1 NC_007058_p22 protein of an unannotated phage phrog_134 unknown function unknown function 1 20033 20209
YP_240365.1 NC_007058_p60 protein of an unannotated phage phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 38284 38643
YP_240332.1 NC_007058_p27 protein of an unannotated phage phrog_263 holin lysis 1 24202 24504
YP_240347.1 NC_007058_p42 protein of an unannotated phage phrog_369 unknown function unknown function 1 31918 32079
YP_240371.1 NC_007058_p66 protein of an unannotated phage phrog_266 unknown function unknown function 1 40206 40460
YP_240373.1 NC_007058_p68 protein of an unannotated phage phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 40610 41140