Genomic map of Staphylococcus virus 71 (NC_007059)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007059
Definition
Staphylococcus phage 71, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
43114
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
35.23
Number of singletons
0
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_240400.1 NC_007059_p20 protein of an unannotated phage phrog_300 tail fiber protein tail 1 18447 18824
YP_240434.1 NC_007059_p50 protein of an unannotated phage phrog_2289 helicase loader DNA, RNA and nucleotide metabolism 1 36526 36882
YP_240440.1 NC_007059_p56 protein of an unannotated phage phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 39162 39518
YP_240411.1 NC_007059_p31 protein of an unannotated phage phrog_1 integrase integration and excision -1 27167 28216
YP_240433.1 NC_007059_p49 protein of an unannotated phage phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 35729 36526
YP_240447.1 NC_007059_p63 protein of an unannotated phage phrog_2027 unknown function unknown function 1 41400 41645
YP_240428.1 NC_007059_p46 protein of an unannotated phage phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 33684 34472
YP_240380.1 NC_007059_p1 protein of an unannotated phage phrog_2538 terminase small subunit head and packaging 1 66 446
YP_240438.1 NC_007059_p54 protein of an unannotated phage phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38567 38971
YP_240451.1 NC_007059_p67 protein of an unannotated phage phrog_1058 unknown function unknown function 1 42432 42833
YP_240415.1 NC_007059_p35 protein of an unannotated phage phrog_8 transcriptional regulator transcription regulation -1 29552 30124
YP_240421.1 NC_007059_p40 protein of an unannotated phage phrog_7948 unknown function unknown function -1 32008 32661
YP_240432.1 NC_007059_p48 protein of an unannotated phage phrog_398 unknown function unknown function 1 35065 35757
YP_240391.1 NC_007059_p11 protein of an unannotated phage phrog_176 tail terminator connector 1 6992 7429
YP_240409.1 NC_007059_p29 protein of an unannotated phage phrog_21665 unknown function unknown function 1 25804 26391
YP_240435.1 NC_007059_p51 protein of an unannotated phage phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 36879 38120
YP_240429.1 NC_007059_p47 protein of an unannotated phage phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 34501 35052
YP_240436.1 NC_007059_p52 protein of an unannotated phage phrog_3161 unknown function unknown function 1 38117 38332
YP_240408.1 NC_007059_p28 protein of an unannotated phage phrog_6149 unknown function unknown function -1 24727 25284
YP_240398.1 NC_007059_p18 protein of an unannotated phage phrog_287 minor tail protein tail 1 14726 16624
YP_240383.1 NC_007059_p4 protein of an unannotated phage phrog_115 minor head protein head and packaging 1 3077 4036
YP_240401.1 NC_007059_p21 protein of an unannotated phage phrog_134 unknown function unknown function 1 18824 19000
YP_240404.1 NC_007059_p24 protein of an unannotated phage phrog_1125 tail fiber protein tail 1 21364 22536
YP_240426.1 NC_007059_p44 protein of an unannotated phage phrog_401 unknown function unknown function 1 33200 33460
YP_240443.1 NC_007059_p59 protein of an unannotated phage phrog_1034 unknown function unknown function 1 40182 40457
YP_240394.1 NC_007059_p14 protein of an unannotated phage phrog_1404 tail protein tail 1 8553 8894
YP_240437.1 NC_007059_p53 protein of an unannotated phage phrog_433 unknown function unknown function 1 38335 38556
YP_240386.1 NC_007059_p7 protein of an unannotated phage phrog_390 Arc-like repressor transcription regulation 1 5611 5937
YP_240439.1 NC_007059_p55 protein of an unannotated phage phrog_299 unknown function unknown function 1 38976 39161
YP_240395.1 NC_007059_p15 protein of an unannotated phage phrog_58 tail length tape measure protein tail 1 8897 11866
YP_240399.1 NC_007059_p19 protein of an unannotated phage phrog_257 minor tail protein tail 1 16624 18447
YP_240423.1 NC_007059_p42 protein of an unannotated phage phrog_989 unknown function unknown function 1 32732 32953
YP_240442.1 NC_007059_p58 protein of an unannotated phage phrog_467 unknown function unknown function 1 39778 40182
YP_240393.1 NC_007059_p13 protein of an unannotated phage phrog_183 tail chaperone protein tail 1 8038 8532
YP_240420.1 NC_007059_p39 protein of an unannotated phage phrog_1263 unknown function unknown function 1 31855 31998
YP_240392.1 NC_007059_p12 protein of an unannotated phage phrog_238 major tail protein tail 1 7416 7976
YP_240389.1 NC_007059_p10 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 6566 6979
YP_240450.1 NC_007059_p66 protein of an unannotated phage phrog_152 RinB-like transcriptional activator transcription regulation 1 42258 42431
YP_240381.1 NC_007059_p2 protein of an unannotated phage phrog_2 terminase large subunit head and packaging 1 430 1695
YP_240417.1 NC_007059_p36 protein of an unannotated phage phrog_1534 unknown function unknown function 1 30268 30447
YP_240441.1 NC_007059_p57 protein of an unannotated phage phrog_258 virulence associated other 1 39522 39764
YP_240419.1 NC_007059_p38 protein of an unannotated phage phrog_63 anti-repressor Ant transcription regulation 1 31090 31839
YP_240418.1 NC_007059_p37 protein of an unannotated phage phrog_4989 unknown function unknown function -1 30548 31030
YP_240445.1 NC_007059_p61 protein of an unannotated phage phrog_1235 unknown function unknown function 1 40691 40861
YP_240407.1 NC_007059_p27 protein of an unannotated phage phrog_489 endolysin lysis 1 23254 24666
YP_240387.1 NC_007059_p8 protein of an unannotated phage phrog_1161 head-tail adaptor connector 1 5937 6251
YP_240402.1 NC_007059_p22 protein of an unannotated phage phrog_276 unknown function unknown function 1 19041 19340
YP_240406.1 NC_007059_p26 protein of an unannotated phage phrog_263 holin lysis 1 22992 23267
YP_240412.1 NC_007059_p32 protein of an unannotated phage phrog_7090 unknown function unknown function -1 28274 28645
YP_240444.1 NC_007059_p60 protein of an unannotated phage phrog_266 unknown function unknown function 1 40450 40704
YP_240410.1 NC_007059_p30 protein of an unannotated phage phrog_16483 unknown function unknown function 1 26388 26843
YP_240424.1 NC_007059_p43 protein of an unannotated phage phrog_369 unknown function unknown function 1 32946 33107
YP_240427.1 NC_007059_p45 protein of an unannotated phage phrog_946 unknown function unknown function 1 33470 33691
YP_240388.1 NC_007059_p9 protein of an unannotated phage phrog_25 head closure Hc1 connector 1 6244 6579
YP_240405.1 NC_007059_p25 protein of an unannotated phage phrog_1262 unknown function unknown function 1 22542 22937
YP_240414.1 NC_007059_p34 protein of an unannotated phage phrog_87 metallo-protease other -1 29078 29539
YP_240403.1 NC_007059_p23 protein of an unannotated phage phrog_759 tail associated cell-wall hydrolase other 1 19477 21351
YP_240446.1 NC_007059_p62 protein of an unannotated phage phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 40854 41363
YP_240449.1 NC_007059_p65 protein of an unannotated phage phrog_8847 unknown function unknown function 1 41787 42245
YP_240448.1 NC_007059_p64 protein of an unannotated phage phrog_278 transcriptional regulator transcription regulation 1 41642 41794
YP_240396.1 NC_007059_p16 protein of an unannotated phage phrog_33 distal tail protein Dit tail 1 11881 12816
YP_240413.1 NC_007059_p33 protein of an unannotated phage phrog_5881 unknown function unknown function -1 28635 29060
YP_240385.1 NC_007059_p6 protein of an unannotated phage phrog_544 major head protein head and packaging 1 4770 5594
YP_240422.1 NC_007059_p41 protein of an unannotated phage phrog_26514 unknown function unknown function 1 32194 32406
YP_240397.1 NC_007059_p17 protein of an unannotated phage phrog_663 minor head protein head and packaging 1 12827 14713
YP_240382.1 NC_007059_p3 protein of an unannotated phage phrog_64 portal protein head and packaging 1 1696 3120
YP_240384.1 NC_007059_p5 protein of an unannotated phage phrog_194 head scaffolding protein head and packaging 1 4149 4748