Genomic map of Staphylococcus virus 29 (NC_007061)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007061
Definition
Staphylococcus phage 29, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
42802
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
67
%GC
35.37
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_240602.1 NC_007061_p66 protein of an unannotated phage phrog_1367 unknown function unknown function 1 41940 42086
YP_240565.1 NC_007061_p31 protein of an unannotated phage phrog_18260 unknown function unknown function 1 26493 27134
YP_240584.1 NC_007061_p49 protein of an unannotated phage phrog_378 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 34818 35369
YP_240557.1 NC_007061_p24 protein of an unannotated phage phrog_1125 tail fiber protein tail 1 21648 22820
YP_240559.1 NC_007061_p26 protein of an unannotated phage phrog_962 holin lysis 1 23277 23714
YP_240562.1 NC_007061_p28 protein of an unannotated phage phrog_20463 unknown function unknown function -1 25315 25416
YP_240550.1 NC_007061_p18 protein of an unannotated phage phrog_287 minor tail protein tail 1 15003 16901
YP_240553.1 NC_007061_p20 protein of an unannotated phage phrog_300 tail fiber protein tail 1 18724 19101
YP_240575.1 NC_007061_p41 protein of an unannotated phage phrog_63 anti-repressor Ant transcription regulation 1 31825 32568
YP_240588.1 NC_007061_p52 protein of an unannotated phage phrog_2289 helicase loader DNA, RNA and nucleotide metabolism 1 36852 37208
YP_240587.1 NC_007061_p51 protein of an unannotated phage phrog_186 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 36046 36852
YP_240583.1 NC_007061_p48 protein of an unannotated phage phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34001 34789
YP_240570.1 NC_007061_p36 protein of an unannotated phage phrog_4 transcriptional repressor transcription regulation -1 29764 30393
YP_240532.1 NC_007061_p3 protein of an unannotated phage phrog_115 minor head protein head and packaging 1 3124 4104
YP_240596.1 NC_007061_p60 protein of an unannotated phage phrog_266 unknown function unknown function 1 40114 40371
YP_240573.1 NC_007061_p39 protein of an unannotated phage phrog_8835 unknown function unknown function -1 30951 31199
YP_240593.1 NC_007061_p57 protein of an unannotated phage phrog_299 unknown function unknown function 1 39303 39488
YP_240537.1 NC_007061_p7 protein of an unannotated phage phrog_390 Arc-like repressor transcription regulation 1 5714 6040
YP_240539.1 NC_007061_p9 protein of an unannotated phage phrog_25 head closure Hc1 connector 1 6347 6682
YP_240598.1 NC_007061_p62 protein of an unannotated phage phrog_278 transcriptional regulator transcription regulation 1 40910 41146
YP_240591.1 NC_007061_p55 protein of an unannotated phage phrog_433 unknown function unknown function 1 38662 38883
YP_240571.1 NC_007061_p37 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 30547 30774
YP_240540.1 NC_007061_p10 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 6669 7082
YP_240555.1 NC_007061_p22 protein of an unannotated phage phrog_276 unknown function unknown function 1 19325 19624
YP_240595.1 NC_007061_p59 protein of an unannotated phage phrog_258 virulence associated other 1 39861 40109
YP_240592.1 NC_007061_p56 protein of an unannotated phage phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 38894 39298
YP_240576.1 NC_007061_p42 protein of an unannotated phage phrog_2312 unknown function unknown function 1 32593 32769
YP_240544.1 NC_007061_p13 protein of an unannotated phage phrog_183 tail chaperone protein tail 1 8141 8635
YP_240554.1 NC_007061_p21 protein of an unannotated phage phrog_134 unknown function unknown function 1 19102 19284
YP_240577.1 NC_007061_p43 protein of an unannotated phage phrog_2222 unknown function unknown function -1 32744 32974
YP_240566.1 NC_007061_p32 protein of an unannotated phage phrog_1 integrase integration and excision -1 27477 28523
YP_240551.1 NC_007061_p19 protein of an unannotated phage phrog_257 minor tail protein tail 1 16901 18724
YP_240563.1 NC_007061_p29 protein of an unannotated phage phrog_26562 unknown function unknown function -1 25549 25686
YP_240564.1 NC_007061_p30 protein of an unannotated phage phrog_19015 unknown function unknown function 1 25816 26478
YP_240601.1 NC_007061_p65 protein of an unannotated phage phrog_2409 unknown function unknown function 1 41574 41939
YP_240546.1 NC_007061_p15 protein of an unannotated phage phrog_58 tail length tape measure protein tail 1 9000 12143
YP_240531.1 NC_007061_p2 protein of an unannotated phage phrog_64 portal protein head and packaging 1 1707 3185
YP_240579.1 NC_007061_p45 protein of an unannotated phage phrog_369 unknown function unknown function 1 33259 33420
YP_240572.1 NC_007061_p38 protein of an unannotated phage phrog_6431 unknown function unknown function 1 30797 30958
YP_240548.1 NC_007061_p16 protein of an unannotated phage phrog_33 distal tail protein Dit tail 1 12158 13093
YP_240536.1 NC_007061_p6 protein of an unannotated phage phrog_422 major head protein head and packaging 1 4738 5697
YP_240568.1 NC_007061_p34 protein of an unannotated phage singleton unknown function unknown function -1 28795 29196
YP_240599.1 NC_007061_p63 protein of an unannotated phage phrog_555 unknown function unknown function 1 41171 41407
YP_240556.1 NC_007061_p23 protein of an unannotated phage phrog_759 tail associated cell-wall hydrolase other 1 19761 21635
YP_240534.1 NC_007061_p4 protein of an unannotated phage phrog_194 head scaffolding protein head and packaging 1 4202 4726
YP_240542.1 NC_007061_p11 protein of an unannotated phage phrog_176 tail terminator connector 1 7095 7532
YP_240538.1 NC_007061_p8 protein of an unannotated phage phrog_1161 head-tail adaptor connector 1 6040 6354
YP_240603.1 NC_007061_p67 protein of an unannotated phage phrog_36 transcriptional regulator transcription regulation 1 42111 42533
YP_240574.1 NC_007061_p40 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 31638 31823
YP_240569.1 NC_007061_p35 protein of an unannotated phage phrog_19345 unknown function unknown function -1 29525 29728
YP_240590.1 NC_007061_p54 protein of an unannotated phage phrog_3161 unknown function unknown function 1 38443 38658
YP_240578.1 NC_007061_p44 protein of an unannotated phage phrog_989 unknown function unknown function 1 33045 33266
YP_240543.1 NC_007061_p12 protein of an unannotated phage phrog_238 major tail protein tail 1 7519 8079
YP_240567.1 NC_007061_p33 protein of an unannotated phage phrog_2033 excisionase integration and excision 1 28636 28815
YP_240600.1 NC_007061_p64 protein of an unannotated phage phrog_152 RinB-like transcriptional activator transcription regulation 1 41397 41573
YP_240586.1 NC_007061_p50 protein of an unannotated phage phrog_398 unknown function unknown function 1 35382 36074
YP_240582.1 NC_007061_p47 protein of an unannotated phage phrog_946 unknown function unknown function 1 33787 34008
YP_240581.1 NC_007061_p46 protein of an unannotated phage phrog_401 unknown function unknown function 1 33517 33777
YP_240549.1 NC_007061_p17 protein of an unannotated phage phrog_663 minor head protein head and packaging 1 13104 14990
YP_240558.1 NC_007061_p25 protein of an unannotated phage phrog_1262 unknown function unknown function 1 22826 23221
YP_240589.1 NC_007061_p53 protein of an unannotated phage phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 37205 38446
YP_240530.1 NC_007061_p1 protein of an unannotated phage phrog_2 terminase large subunit head and packaging 1 545 1753
YP_240545.1 NC_007061_p14 protein of an unannotated phage phrog_1404 tail protein tail 1 8656 8997
YP_240594.1 NC_007061_p58 protein of an unannotated phage phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 39489 39860
YP_240560.1 NC_007061_p27 protein of an unannotated phage phrog_635 endolysin lysis 1 23695 25140
YP_240597.1 NC_007061_p61 protein of an unannotated phage phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 40364 40873
YP_240535.1 NC_007061_p5 protein of an unannotated phage phrog_38668 unknown function unknown function 1 4599 4721