| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007064 |
Definition |
Staphylococcus phage 92, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus. |
DB of origin |
REFSEQ |
Length |
42431 |
Host Name |
Staphylococcus aureus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
64 |
%GC |
35.72 |
Number of singletons |
0 |
Number of paralogs |
0 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_240805.1 | NC_007064_p55 | protein of an unannotated phage | phrog_467 | unknown function | unknown function | 1 | 38879 | 39280 |
| YP_240809.1 | NC_007064_p59 | protein of an unannotated phage | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 40163 | 40723 |
| YP_240772.1 | NC_007064_p26 | protein of an unannotated phage | phrog_962 | holin | lysis | 1 | 23160 | 23597 |
| YP_240769.1 | NC_007064_p23 | protein of an unannotated phage | phrog_759 | tail associated cell-wall hydrolase | other | 1 | 19644 | 21518 |
| YP_240780.1 | NC_007064_p32 | protein of an unannotated phage | phrog_4 | transcriptional repressor | transcription regulation | -1 | 28556 | 29275 |
| YP_240771.1 | NC_007064_p25 | protein of an unannotated phage | phrog_1262 | unknown function | unknown function | 1 | 22709 | 23104 |
| YP_240779.1 | NC_007064_p31 | protein of an unannotated phage | phrog_1412 | antitoxin mazE-like | moron, auxiliary metabolic gene and host takeover | -1 | 27840 | 28520 |
| YP_240807.1 | NC_007064_p57 | protein of an unannotated phage | phrog_1034 | unknown function | unknown function | 1 | 39621 | 39929 |
| YP_240748.1 | NC_007064_p5 | protein of an unannotated phage | phrog_194 | head scaffolding protein | head and packaging | 1 | 4319 | 4915 |
| YP_240777.1 | NC_007064_p29 | protein of an unannotated phage | phrog_7090 | unknown function | unknown function | 1 | 25718 | 26101 |
| YP_240803.1 | NC_007064_p53 | protein of an unannotated phage | phrog_201 | Panton-Valentine leukocicin | DNA, RNA and nucleotide metabolism | 1 | 37994 | 38617 |
| YP_240790.1 | NC_007064_p41 | protein of an unannotated phage | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 32243 | 32881 |
| YP_240773.1 | NC_007064_p27 | protein of an unannotated phage | phrog_635 | endolysin | lysis | 1 | 23578 | 25023 |
| YP_240799.1 | NC_007064_p49 | protein of an unannotated phage | phrog_433 | unknown function | unknown function | 1 | 36746 | 36967 |
| YP_240786.1 | NC_007064_p37 | protein of an unannotated phage | phrog_11451 | CI-like repressor | transcription regulation | 1 | 30800 | 31114 |
| YP_240768.1 | NC_007064_p22 | protein of an unannotated phage | phrog_276 | unknown function | unknown function | 1 | 19208 | 19507 |
| YP_240813.1 | NC_007064_p63 | protein of an unannotated phage | phrog_152 | RinB-like transcriptional activator | transcription regulation | 1 | 41652 | 41825 |
| YP_240770.1 | NC_007064_p24 | protein of an unannotated phage | phrog_1125 | tail fiber protein | tail | 1 | 21531 | 22703 |
| YP_240762.1 | NC_007064_p17 | protein of an unannotated phage | phrog_663 | minor head protein | head and packaging | 1 | 12993 | 14879 |
| YP_240800.1 | NC_007064_p50 | protein of an unannotated phage | phrog_111 | DNA methyltransferase | other | 1 | 36977 | 37402 |
| YP_240766.1 | NC_007064_p20 | protein of an unannotated phage | phrog_300 | tail fiber protein | tail | 1 | 18613 | 18990 |
| YP_240795.1 | NC_007064_p45 | protein of an unannotated phage | phrog_2232 | unknown function | unknown function | -1 | 34097 | 34954 |
| YP_240759.1 | NC_007064_p15 | protein of an unannotated phage | phrog_58 | tail length tape measure protein | tail | 1 | 9063 | 12032 |
| YP_240743.1 | NC_007064_p2 | protein of an unannotated phage | phrog_2 | terminase large subunit | head and packaging | 1 | 612 | 1877 |
| YP_240802.1 | NC_007064_p52 | protein of an unannotated phage | phrog_299 | unknown function | unknown function | 1 | 37808 | 37993 |
| YP_240798.1 | NC_007064_p48 | protein of an unannotated phage | phrog_809 | transcriptional regulator | transcription regulation | 1 | 36572 | 36733 |
| YP_240781.1 | NC_007064_p33 | protein of an unannotated phage | phrog_3 | transcriptional repressor | transcription regulation | 1 | 29417 | 29635 |
| YP_240788.1 | NC_007064_p39 | protein of an unannotated phage | phrog_401 | unknown function | unknown function | 1 | 31489 | 31749 |
| YP_240757.1 | NC_007064_p13 | protein of an unannotated phage | phrog_183 | tail chaperone protein | tail | 1 | 8204 | 8698 |
| YP_240756.1 | NC_007064_p12 | protein of an unannotated phage | phrog_238 | major tail protein | tail | 1 | 7582 | 8142 |
| YP_240741.1 | NC_007064_p1 | protein of an unannotated phage | phrog_51 | terminase small subunit | head and packaging | 1 | 140 | 628 |
| YP_240784.1 | NC_007064_p36 | protein of an unannotated phage | phrog_369 | unknown function | unknown function | 1 | 30624 | 30785 |
| YP_240812.1 | NC_007064_p62 | protein of an unannotated phage | phrog_301 | secreted protein | other | 1 | 41266 | 41655 |
| YP_240811.1 | NC_007064_p61 | protein of an unannotated phage | phrog_555 | unknown function | unknown function | 1 | 41040 | 41276 |
| YP_240810.1 | NC_007064_p60 | protein of an unannotated phage | phrog_2334 | transcriptional regulator | transcription regulation | 1 | 40760 | 41047 |
| YP_240794.1 | NC_007064_p44 | protein of an unannotated phage | phrog_10049 | unknown function | unknown function | 1 | 33988 | 34104 |
| YP_240783.1 | NC_007064_p35 | protein of an unannotated phage | phrog_5920 | unknown function | unknown function | 1 | 30401 | 30610 |
| YP_240767.1 | NC_007064_p21 | protein of an unannotated phage | phrog_134 | unknown function | unknown function | 1 | 18991 | 19167 |
| YP_240804.1 | NC_007064_p54 | protein of an unannotated phage | phrog_258 | virulence associated | other | 1 | 38618 | 38866 |
| YP_240789.1 | NC_007064_p40 | protein of an unannotated phage | phrog_253 | Mu Gam-like end protection | DNA, RNA and nucleotide metabolism | 1 | 31764 | 32243 |
| YP_240752.1 | NC_007064_p9 | protein of an unannotated phage | phrog_25 | head closure Hc1 | connector | 1 | 6410 | 6745 |
| YP_240791.1 | NC_007064_p42 | protein of an unannotated phage | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 32881 | 33303 |
| YP_240764.1 | NC_007064_p19 | protein of an unannotated phage | phrog_257 | minor tail protein | tail | 1 | 16790 | 18613 |
| YP_240814.1 | NC_007064_p64 | protein of an unannotated phage | phrog_1058 | unknown function | unknown function | 1 | 41826 | 42227 |
| YP_240801.1 | NC_007064_p51 | protein of an unannotated phage | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 37399 | 37803 |
| YP_240744.1 | NC_007064_p3 | protein of an unannotated phage | phrog_64 | portal protein | head and packaging | 1 | 1878 | 3302 |
| YP_240778.1 | NC_007064_p30 | protein of an unannotated phage | phrog_95 | integrase | integration and excision | -1 | 26248 | 27633 |
| YP_240797.1 | NC_007064_p47 | protein of an unannotated phage | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 35799 | 36578 |
| YP_240787.1 | NC_007064_p38 | protein of an unannotated phage | phrog_2182 | unknown function | unknown function | 1 | 31179 | 31508 |
| YP_240782.1 | NC_007064_p34 | protein of an unannotated phage | phrog_463 | anti-repressor | transcription regulation | 1 | 29651 | 30388 |
| YP_240776.1 | NC_007064_p28 | protein of an unannotated phage | phrog_7919 | unknown function | unknown function | 1 | 25420 | 25731 |
| YP_240753.1 | NC_007064_p10 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 6732 | 7145 |
| YP_240808.1 | NC_007064_p58 | protein of an unannotated phage | phrog_266 | unknown function | unknown function | 1 | 39922 | 40170 |
| YP_240749.1 | NC_007064_p6 | protein of an unannotated phage | phrog_544 | major head protein | head and packaging | 1 | 4936 | 5760 |
| YP_240796.1 | NC_007064_p46 | protein of an unannotated phage | phrog_428 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 35019 | 35789 |
| YP_240763.1 | NC_007064_p18 | protein of an unannotated phage | phrog_287 | minor tail protein | tail | 1 | 14892 | 16790 |
| YP_240758.1 | NC_007064_p14 | protein of an unannotated phage | phrog_1404 | tail protein | tail | 1 | 8719 | 9060 |
| YP_240792.1 | NC_007064_p43 | protein of an unannotated phage | phrog_398 | unknown function | unknown function | 1 | 33317 | 33991 |
| YP_240755.1 | NC_007064_p11 | protein of an unannotated phage | phrog_176 | tail terminator | connector | 1 | 7158 | 7595 |
| YP_240746.1 | NC_007064_p4 | protein of an unannotated phage | phrog_115 | minor head protein | head and packaging | 1 | 3259 | 4221 |
| YP_240806.1 | NC_007064_p56 | protein of an unannotated phage | phrog_98 | unknown function | unknown function | 1 | 39277 | 39624 |
| YP_240761.1 | NC_007064_p16 | protein of an unannotated phage | phrog_33 | distal tail protein Dit | tail | 1 | 12047 | 12982 |
| YP_240751.1 | NC_007064_p8 | protein of an unannotated phage | phrog_1161 | head-tail adaptor | connector | 1 | 6103 | 6417 |
| YP_240750.1 | NC_007064_p7 | protein of an unannotated phage | phrog_390 | Arc-like repressor | transcription regulation | 1 | 5777 | 6103 |