Genomic map of Staphylococcus virus X2 (NC_007065)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007065
Definition
Staphylococcus phage X2, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Phietavirus.
DB of origin
REFSEQ
Length
43440
Host Name
Staphylococcus aureus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
77
%GC
35.95
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_240867.1 NC_007065_p53 protein of an unannotated phage phrog_13915 unknown function unknown function -1 33448 33558
YP_240858.1 NC_007065_p44 protein of an unannotated phage phrog_4 transcriptional repressor transcription regulation -1 30223 30825
YP_240832.1 NC_007065_p18 protein of an unannotated phage phrog_1404 tail protein tail 1 8539 8880
YP_240850.1 NC_007065_p36 protein of an unannotated phage singleton unknown function unknown function 1 25858 26013
YP_240819.1 NC_007065_p5 protein of an unannotated phage phrog_32331 unknown function unknown function -1 3814 4083
YP_240876.1 NC_007065_p62 protein of an unannotated phage phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 37332 38573
YP_240840.1 NC_007065_p26 protein of an unannotated phage phrog_300 tail fiber protein tail 1 18433 18810
YP_240872.1 NC_007065_p58 protein of an unannotated phage phrog_44 single strand DNA binding protein DNA, RNA and nucleotide metabolism 1 35115 35534
YP_240843.1 NC_007065_p29 protein of an unannotated phage phrog_759 tail associated cell-wall hydrolase other 1 19475 21349
YP_240828.1 NC_007065_p14 protein of an unannotated phage phrog_31766 unknown function unknown function 1 6751 6927
YP_240875.1 NC_007065_p61 protein of an unannotated phage phrog_2289 helicase loader DNA, RNA and nucleotide metabolism 1 36979 37335
YP_240859.1 NC_007065_p45 protein of an unannotated phage singleton unknown function unknown function 1 30590 30742
YP_240826.1 NC_007065_p12 protein of an unannotated phage phrog_25 head closure Hc1 connector 1 6230 6565
YP_240822.1 NC_007065_p8 protein of an unannotated phage phrog_544 major head protein head and packaging 1 4768 5580
YP_240890.1 NC_007065_p76 protein of an unannotated phage phrog_152 RinB-like transcriptional activator transcription regulation 1 42608 42781
YP_240861.1 NC_007065_p47 protein of an unannotated phage phrog_3882 unknown function unknown function 1 31252 31419
YP_240846.1 NC_007065_p32 protein of an unannotated phage phrog_962 holin lysis 1 23425 23862
YP_240853.1 NC_007065_p39 protein of an unannotated phage phrog_419 unknown function unknown function 1 28316 28513
YP_240831.1 NC_007065_p17 protein of an unannotated phage phrog_183 tail chaperone protein tail 1 8024 8518
YP_240857.1 NC_007065_p43 protein of an unannotated phage singleton unknown function unknown function -1 30123 30284
YP_240883.1 NC_007065_p69 protein of an unannotated phage phrog_258 virulence associated other 1 40408 40650
YP_240866.1 NC_007065_p52 protein of an unannotated phage phrog_369 unknown function unknown function 1 33428 33595
YP_240848.1 NC_007065_p34 protein of an unannotated phage phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism 1 24514 25059
YP_240855.1 NC_007065_p41 protein of an unannotated phage phrog_7395 unknown function unknown function -1 28911 29348
YP_240852.1 NC_007065_p38 protein of an unannotated phage phrog_95 integrase integration and excision -1 26822 28207
YP_240864.1 NC_007065_p50 protein of an unannotated phage phrog_463 anti-repressor transcription regulation 1 32585 33292
YP_240835.1 NC_007065_p21 protein of an unannotated phage phrog_663 minor head protein head and packaging 1 12813 14699
YP_240827.1 NC_007065_p13 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 6615 6965
YP_240845.1 NC_007065_p31 protein of an unannotated phage phrog_18372 tail fiber protein tail 1 21362 23374
YP_240842.1 NC_007065_p28 protein of an unannotated phage phrog_276 unknown function unknown function 1 19033 19338
YP_240823.1 NC_007065_p9 protein of an unannotated phage singleton unknown function unknown function 1 5339 5521
YP_240849.1 NC_007065_p35 protein of an unannotated phage phrog_833 endolysin lysis 1 25590 26222
YP_240860.1 NC_007065_p46 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 31021 31236
YP_240856.1 NC_007065_p42 protein of an unannotated phage phrog_888 unknown function unknown function -1 29380 30105
YP_240868.1 NC_007065_p54 protein of an unannotated phage phrog_9362 unknown function unknown function 1 33596 33916
YP_240882.1 NC_007065_p68 protein of an unannotated phage phrog_201 Panton-Valentine leukocicin DNA, RNA and nucleotide metabolism 1 40048 40404
YP_240871.1 NC_007065_p57 protein of an unannotated phage phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 34492 35115
YP_240825.1 NC_007065_p11 protein of an unannotated phage phrog_1161 head-tail adaptor connector 1 5923 6237
YP_240891.1 NC_007065_p77 protein of an unannotated phage phrog_1058 unknown function unknown function 1 42782 43183
YP_240830.1 NC_007065_p16 protein of an unannotated phage phrog_238 major tail protein tail 1 7402 7962
YP_240815.1 NC_007065_p1 protein of an unannotated phage phrog_2538 terminase small subunit head and packaging 1 89 469
YP_240820.1 NC_007065_p6 protein of an unannotated phage phrog_28643 unknown function unknown function 1 3902 4009
YP_240838.1 NC_007065_p24 protein of an unannotated phage phrog_257 minor tail protein tail 1 16610 18433
YP_240847.1 NC_007065_p33 protein of an unannotated phage phrog_7887 endolysin lysis 1 23843 24484
YP_240885.1 NC_007065_p71 protein of an unannotated phage phrog_1034 unknown function unknown function 1 41071 41346
YP_240818.1 NC_007065_p4 protein of an unannotated phage phrog_115 minor head protein head and packaging 1 3100 4062
YP_240816.1 NC_007065_p2 protein of an unannotated phage phrog_2 terminase large subunit head and packaging 1 453 1718
YP_240886.1 NC_007065_p72 protein of an unannotated phage phrog_266 unknown function unknown function 1 41339 41587
YP_240879.1 NC_007065_p65 protein of an unannotated phage phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 39020 39424
YP_240874.1 NC_007065_p60 protein of an unannotated phage phrog_6493 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 36215 36979
YP_240880.1 NC_007065_p66 protein of an unannotated phage phrog_299 unknown function unknown function 1 39429 39614
YP_240844.1 NC_007065_p30 protein of an unannotated phage singleton unknown function unknown function 1 20880 20981
YP_240888.1 NC_007065_p74 protein of an unannotated phage phrog_278 transcriptional regulator transcription regulation 1 42177 42395
YP_240873.1 NC_007065_p59 protein of an unannotated phage phrog_398 unknown function unknown function 1 35548 36222
YP_240841.1 NC_007065_p27 protein of an unannotated phage phrog_134 unknown function unknown function 1 18811 18993
YP_240865.1 NC_007065_p51 protein of an unannotated phage phrog_3785 unknown function unknown function 1 33307 33444
YP_240862.1 NC_007065_p48 protein of an unannotated phage phrog_4989 unknown function unknown function -1 31470 31952
YP_240878.1 NC_007065_p64 protein of an unannotated phage phrog_433 unknown function unknown function 1 38788 39009
YP_240889.1 NC_007065_p75 protein of an unannotated phage phrog_555 unknown function unknown function 1 42379 42615
YP_240836.1 NC_007065_p22 protein of an unannotated phage phrog_287 minor tail protein tail 1 14712 16610
YP_240851.1 NC_007065_p37 protein of an unannotated phage phrog_20463 unknown function unknown function -1 26299 26400
YP_240821.1 NC_007065_p7 protein of an unannotated phage phrog_194 head scaffolding protein head and packaging 1 4160 4750
YP_240887.1 NC_007065_p73 protein of an unannotated phage phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 41580 42140
YP_240829.1 NC_007065_p15 protein of an unannotated phage phrog_176 tail terminator connector 1 6978 7415
YP_240817.1 NC_007065_p3 protein of an unannotated phage phrog_64 portal protein head and packaging 1 1719 3143
YP_240837.1 NC_007065_p23 protein of an unannotated phage phrog_36044 unknown function unknown function 1 15700 15816
YP_240863.1 NC_007065_p49 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 32398 32583
YP_240877.1 NC_007065_p63 protein of an unannotated phage phrog_3161 unknown function unknown function 1 38570 38785
YP_240881.1 NC_007065_p67 protein of an unannotated phage phrog_1709 unknown function unknown function 1 39615 39920
YP_240854.1 NC_007065_p40 protein of an unannotated phage phrog_6988 unknown function unknown function -1 28510 28917
YP_240824.1 NC_007065_p10 protein of an unannotated phage phrog_390 Arc-like repressor transcription regulation 1 5597 5923
YP_240870.1 NC_007065_p56 protein of an unannotated phage phrog_946 unknown function unknown function 1 34278 34499
YP_240884.1 NC_007065_p70 protein of an unannotated phage phrog_467 unknown function unknown function 1 40661 41071
YP_240839.1 NC_007065_p25 protein of an unannotated phage singleton unknown function unknown function 1 17907 18047
YP_240833.1 NC_007065_p19 protein of an unannotated phage phrog_58 tail length tape measure protein tail 1 8883 11852
YP_240869.1 NC_007065_p55 protein of an unannotated phage phrog_401 unknown function unknown function 1 34008 34268
YP_240834.1 NC_007065_p20 protein of an unannotated phage phrog_33 distal tail protein Dit tail 1 11867 12802