Genomic map of Enterobacteria phage K1F (NC_007456)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007456
Definition
Enterobacteria phage K1F, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Autographiviridae; Studiervirinae; Kayfunavirus; Escherichia virus K1F.
DB of origin
REFSEQ
Length
39704
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
43
%GC
49.77
Number of singletons
4
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_338110.1 NC_007456_p21 hypothetical protein singleton unknown function unknown function 1 15365 15517
YP_338108.1 NC_007456_p19 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 12921 15690
YP_338100.1 NC_007456_p11 hypothetical protein phrog_1312 unknown function unknown function 1 8250 8348
YP_338112.1 NC_007456_p23 hypothetical protein phrog_1334 unknown function unknown function 1 15978 16187
YP_338121.1 NC_007456_p32 tail tubular protein A phrog_446 tail protein tail 1 22373 22939
YP_338131.1 NC_007456_p42 maturation protein phrog_38 terminase large subunit head and packaging 1 37030 38757
YP_338096.1 NC_007456_p7 ATP-dependent DNA ligase phrog_114 ATP-dependent DNA ligase DNA, RNA and nucleotide metabolism 1 6096 7118
YP_338113.1 NC_007456_p24 exonuclease phrog_107 exonuclease DNA, RNA and nucleotide metabolism 1 16184 17050
YP_338107.1 NC_007456_p18 primase/helicase phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 10939 12699
YP_338097.1 NC_007456_p8 hypothetical protein phrog_1777 unknown function unknown function 1 7230 7487
YP_338101.1 NC_007456_p12 inhibitor of host bacterial RNA polymerase phrog_1307 RNA polymerase inhibitor DNA, RNA and nucleotide metabolism 1 8345 8503
YP_338115.1 NC_007456_p26 hypothetical protein phrog_1391 unknown function unknown function 1 17548 17772
YP_338119.1 NC_007456_p30 capsid assembly protein phrog_1052 head assembly head and packaging 1 20111 20995
YP_338109.1 NC_007456_p20 homing endonuclease phrog_6254 HNH endonuclease DNA, RNA and nucleotide metabolism 1 15019 15414
YP_338122.1 NC_007456_p33 tail tube phrog_457 tail protein tail 1 22939 25296
YP_338130.1 NC_007456_p41 phage lambda Rz-like lysis protein phrog_1327 Rz-like spanin lysis 1 36551 37000
YP_338099.1 NC_007456_p10 hypothetical protein singleton unknown function unknown function 1 7942 8169
YP_338105.1 NC_007456_p16 lysozyme phrog_822 amidase lysis 1 10172 10630
YP_338114.1 NC_007456_p25 hypothetical protein phrog_1447 unknown function unknown function 1 17261 17533
YP_338104.1 NC_007456_p15 hypothetical protein phrog_16385 unknown function unknown function 1 9708 10178
YP_338123.1 NC_007456_p34 internal virion protein A phrog_308 internal virion protein head and packaging 1 25373 25843
YP_338091.1 NC_007456_p2 hypothetical protein phrog_5058 unknown function unknown function 1 1623 1772
YP_338106.1 NC_007456_p17 hypothetical protein phrog_1950 unknown function unknown function 1 10655 10870
YP_338102.1 NC_007456_p13 single-stranded DNA-binding protein phrog_112 Gp2.5-like ssDNA binding protein and ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 8624 9259
YP_338093.1 NC_007456_p4 hypothetical protein phrog_2385 unknown function unknown function 1 2011 2208
YP_338090.1 NC_007456_p1 antirestriction protein phrog_2568 ocr-like anti-restriction moron, auxiliary metabolic gene and host takeover 1 1114 1623
YP_338103.1 NC_007456_p14 endonuclease I phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9259 9711
YP_338128.1 NC_007456_p39 type II holin phrog_920 holin lysis 1 35994 36188
YP_338092.1 NC_007456_p3 hypothetical protein phrog_7319 unknown function unknown function 1 1840 2007
YP_338132.1 NC_007456_p43 hypothetical protein singleton unknown function unknown function 1 38787 38891
YP_338111.1 NC_007456_p22 hypothetical protein singleton unknown function unknown function 1 15690 15938
YP_338129.1 NC_007456_p40 DNA packaging protein, small subunit phrog_1351 terminase small subunit head and packaging 1 36185 36448
YP_338116.1 NC_007456_p27 hypothetical protein phrog_2746 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 17813 18181
YP_338120.1 NC_007456_p31 major capsid protein phrog_267 major head protein head and packaging 1 21136 22179
YP_338124.1 NC_007456_p35 internal virion protein B phrog_805 internal virion protein head and packaging 1 25828 26415
YP_338095.1 NC_007456_p6 hypothetical protein phrog_8082 unknown function unknown function 1 5262 5477
YP_338126.1 NC_007456_p37 internal virion protein D phrog_342 internal virion protein with endolysin domain head and packaging 1 28714 32601
YP_338118.1 NC_007456_p29 head to tail connector phrog_449 head-tail adaptor connector 1 18434 20002
YP_338094.1 NC_007456_p5 T3/T7-like RNA polymerase phrog_414 RNA polymerase DNA, RNA and nucleotide metabolism 1 2566 5247
YP_338125.1 NC_007456_p36 internal virion protein C phrog_1339 internal virion protein head and packaging 1 26427 28709
YP_338098.1 NC_007456_p9 hypothetical protein phrog_2585 nucleotide kinase other 1 7484 7930
YP_338127.1 NC_007456_p38 endo-N-acetylneuraminidase phrog_1171 tail spike protein tail 1 32666 35860
YP_338117.1 NC_007456_p28 tail assembly protein phrog_1320 host range and adsorption protein moron, auxiliary metabolic gene and host takeover 1 18174 18422