| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007458 |
Definition |
Bacillus phage Gamma, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wbetavirus; unclassified Wbetavirus. |
DB of origin |
REFSEQ |
Length |
37253 |
Host Name |
Bacillus cereus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
53 |
%GC |
35.22 |
Number of singletons |
0 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_338192.1 | NC_007458_p9 | hypothetical protein | phrog_78 | tail terminator | connector | 1 | 6414 | 6773 |
| YP_338217.1 | NC_007458_p34 | hypothetical protein | phrog_8412 | unknown function | unknown function | 1 | 29079 | 29312 |
| YP_338208.1 | NC_007458_p25 | hypothetical protein | phrog_25104 | unknown function | unknown function | 1 | 22045 | 22164 |
| YP_338224.1 | NC_007458_p41 | hypothetical protein | phrog_28082 | unknown function | unknown function | -1 | 32508 | 32696 |
| YP_338199.1 | NC_007458_p16 | holin | phrog_199 | holin | lysis | 1 | 17230 | 17655 |
| YP_338232.1 | NC_007458_p49 | hypothetical protein | phrog_9442 | unknown function | unknown function | 1 | 35191 | 35595 |
| YP_338210.1 | NC_007458_p27 | site-specific recombinase | phrog_95 | integrase | integration and excision | 1 | 23107 | 24561 |
| YP_338213.1 | NC_007458_p30 | antirepressor, | phrog_463 | anti-repressor | transcription regulation | 1 | 25522 | 26337 |
| YP_338233.1 | NC_007458_p50 | hypothetical protein | phrog_11511 | unknown function | unknown function | 1 | 35700 | 35891 |
| YP_338227.1 | NC_007458_p44 | hypothetical protein | phrog_1235 | unknown function | unknown function | 1 | 33531 | 33770 |
| YP_338204.1 | NC_007458_p21 | hypothetical protein | phrog_5703 | unknown function | unknown function | 1 | 19599 | 19781 |
| YP_338220.1 | NC_007458_p37 | hypothetical protein | phrog_173 | nucleoside triphosphate pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 30584 | 31126 |
| YP_338215.1 | NC_007458_p32 | phage replisome organizer protein, | phrog_1701 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 27165 | 28133 |
| YP_338209.1 | NC_007458_p26 | hypothetical protein | phrog_1835 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 22177 | 23040 |
| YP_338196.1 | NC_007458_p13 | tail tape measure protein | phrog_1533 | tail length tape measure protein | tail | 1 | 7972 | 11823 |
| YP_338225.1 | NC_007458_p42 | hypothetical protein | phrog_18684 | unknown function | unknown function | 1 | 32874 | 33044 |
| YP_338236.1 | NC_007458_p53 | hypothetical protein | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 36823 | 37206 |
| YP_338188.1 | NC_007458_p5 | major capsid protein, HK97 family | phrog_10 | major head protein | head and packaging | 1 | 4178 | 5356 |
| YP_338193.1 | NC_007458_p10 | major tail protein, phi13 family | phrog_88 | major tail protein | tail | 1 | 6774 | 7382 |
| YP_338186.1 | NC_007458_p3 | phage portal protein, HK97 family | phrog_12 | portal protein | head and packaging | 1 | 2258 | 3556 |
| YP_338206.1 | NC_007458_p23 | hypothetical protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 21022 | 21639 |
| YP_338223.1 | NC_007458_p40 | fosfomycin resistance protein | phrog_34466 | unknown function | unknown function | -1 | 32004 | 32369 |
| YP_338187.1 | NC_007458_p4 | prohead protease, HK97 family | phrog_80 | head maturation protease | head and packaging | 1 | 3519 | 4139 |
| YP_338214.1 | NC_007458_p31 | hypothetical protein | phrog_6329 | unknown function | unknown function | 1 | 26404 | 27057 |
| YP_338218.1 | NC_007458_p35 | RNA polymerase sigma factor, | phrog_351 | RNA polymerase sigma factor | transcription regulation | 1 | 29305 | 30051 |
| YP_338207.1 | NC_007458_p24 | phage regulatory protein | phrog_3 | transcriptional repressor | transcription regulation | -1 | 21673 | 21909 |
| YP_338228.1 | NC_007458_p45 | hypothetical protein | phrog_8934 | unknown function | unknown function | 1 | 33923 | 34045 |
| YP_338221.1 | NC_007458_p38 | hypothetical protein | phrog_6214 | unknown function | unknown function | 1 | 31150 | 31380 |
| YP_338198.1 | NC_007458_p15 | minor structural protein | phrog_1775 | minor head protein | head and packaging | 1 | 13325 | 17191 |
| YP_338189.1 | NC_007458_p6 | hypothetical protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5374 | 5664 |
| YP_338202.1 | NC_007458_p19 | repressor protein, | phrog_3 | transcriptional repressor | transcription regulation | -1 | 18898 | 19110 |
| YP_338212.1 | NC_007458_p29 | hypothetical protein | phrog_14915 | unknown function | unknown function | 1 | 25119 | 25277 |
| YP_338184.1 | NC_007458_p1 | phage terminase, small subunit, P27 family | phrog_83 | terminase small subunit | head and packaging | 1 | 63 | 548 |
| YP_338201.1 | NC_007458_p18 | hypothetical protein | phrog_9170 | unknown function | unknown function | -1 | 18414 | 18905 |
| YP_338222.1 | NC_007458_p39 | hypothetical protein | phrog_1672 | unknown function | unknown function | 1 | 31547 | 31957 |
| YP_338191.1 | NC_007458_p8 | conserved phage protein, HK97family | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5977 | 6417 |
| YP_338195.1 | NC_007458_p12 | hypothetical protein | phrog_8548 | unknown function | unknown function | 1 | 7779 | 7955 |
| YP_338230.1 | NC_007458_p47 | hypothetical protein | phrog_10998 | unknown function | unknown function | 1 | 34734 | 34958 |
| YP_338211.1 | NC_007458_p28 | transcriptional regulator, | phrog_37093 | transcriptional regulator | transcription regulation | -1 | 24564 | 24692 |
| YP_338226.1 | NC_007458_p43 | hypothetical protein | phrog_2275 | unknown function | unknown function | 1 | 33239 | 33538 |
| YP_338190.1 | NC_007458_p7 | head-tail adaptor protein | phrog_25 | head closure Hc1 | connector | 1 | 5661 | 5984 |
| YP_338216.1 | NC_007458_p33 | phage replication protein, | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 28149 | 29060 |
| YP_338185.1 | NC_007458_p2 | phage terminase, large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 545 | 2242 |
| YP_338205.1 | NC_007458_p22 | FtsK/SpoIIIE family protein | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 19836 | 21080 |
| YP_338231.1 | NC_007458_p48 | hypothetical protein | phrog_2395 | unknown function | unknown function | 1 | 34965 | 35186 |
| YP_338234.1 | NC_007458_p51 | hypothetical protein | phrog_16900 | unknown function | unknown function | 1 | 36162 | 36332 |
| YP_338197.1 | NC_007458_p14 | tail component protein | phrog_202 | distal tail protein Dit | tail | 1 | 11826 | 13328 |
| YP_338229.1 | NC_007458_p46 | hypothetical protein | phrog_36 | transcriptional regulator | transcription regulation | 1 | 34219 | 34614 |
| YP_338219.1 | NC_007458_p36 | hypothetical protein | phrog_8281 | unknown function | unknown function | 1 | 30048 | 30524 |
| YP_338203.1 | NC_007458_p20 | hypothetical protein | phrog_4616 | unknown function | unknown function | 1 | 19294 | 19602 |
| YP_338235.1 | NC_007458_p52 | hypothetical protein | phrog_4705 | unknown function | unknown function | 1 | 36557 | 36823 |
| YP_338194.1 | NC_007458_p11 | hypothetical protein | phrog_187 | head-tail adaptor | connector | 1 | 7432 | 7749 |
| YP_338200.1 | NC_007458_p17 | N-acetylmuramoyl-L-alanine amidase | phrog_3088 | amidase | lysis | 1 | 17655 | 18356 |