Genomic map of Bacillus phage Gamma (NC_007458)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007458
Definition
Bacillus phage Gamma, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wbetavirus; unclassified Wbetavirus.
DB of origin
REFSEQ
Length
37253
Host Name
Bacillus cereus
Host domain
Bacteria
Is prophage?
undef
Number of proteins
53
%GC
35.22
Number of singletons
0
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_338192.1 NC_007458_p9 hypothetical protein phrog_78 tail terminator connector 1 6414 6773
YP_338217.1 NC_007458_p34 hypothetical protein phrog_8412 unknown function unknown function 1 29079 29312
YP_338208.1 NC_007458_p25 hypothetical protein phrog_25104 unknown function unknown function 1 22045 22164
YP_338224.1 NC_007458_p41 hypothetical protein phrog_28082 unknown function unknown function -1 32508 32696
YP_338199.1 NC_007458_p16 holin phrog_199 holin lysis 1 17230 17655
YP_338232.1 NC_007458_p49 hypothetical protein phrog_9442 unknown function unknown function 1 35191 35595
YP_338210.1 NC_007458_p27 site-specific recombinase phrog_95 integrase integration and excision 1 23107 24561
YP_338213.1 NC_007458_p30 antirepressor, phrog_463 anti-repressor transcription regulation 1 25522 26337
YP_338233.1 NC_007458_p50 hypothetical protein phrog_11511 unknown function unknown function 1 35700 35891
YP_338227.1 NC_007458_p44 hypothetical protein phrog_1235 unknown function unknown function 1 33531 33770
YP_338204.1 NC_007458_p21 hypothetical protein phrog_5703 unknown function unknown function 1 19599 19781
YP_338220.1 NC_007458_p37 hypothetical protein phrog_173 nucleoside triphosphate pyrophosphohydrolase DNA, RNA and nucleotide metabolism 1 30584 31126
YP_338215.1 NC_007458_p32 phage replisome organizer protein, phrog_1701 DnaD-like helicase loader DNA, RNA and nucleotide metabolism 1 27165 28133
YP_338209.1 NC_007458_p26 hypothetical protein phrog_1835 HTH DNA binding protein DNA, RNA and nucleotide metabolism 1 22177 23040
YP_338196.1 NC_007458_p13 tail tape measure protein phrog_1533 tail length tape measure protein tail 1 7972 11823
YP_338225.1 NC_007458_p42 hypothetical protein phrog_18684 unknown function unknown function 1 32874 33044
YP_338236.1 NC_007458_p53 hypothetical protein phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 36823 37206
YP_338188.1 NC_007458_p5 major capsid protein, HK97 family phrog_10 major head protein head and packaging 1 4178 5356
YP_338193.1 NC_007458_p10 major tail protein, phi13 family phrog_88 major tail protein tail 1 6774 7382
YP_338186.1 NC_007458_p3 phage portal protein, HK97 family phrog_12 portal protein head and packaging 1 2258 3556
YP_338206.1 NC_007458_p23 hypothetical protein phrog_2190 replication initiation protein DNA, RNA and nucleotide metabolism 1 21022 21639
YP_338223.1 NC_007458_p40 fosfomycin resistance protein phrog_34466 unknown function unknown function -1 32004 32369
YP_338187.1 NC_007458_p4 prohead protease, HK97 family phrog_80 head maturation protease head and packaging 1 3519 4139
YP_338214.1 NC_007458_p31 hypothetical protein phrog_6329 unknown function unknown function 1 26404 27057
YP_338218.1 NC_007458_p35 RNA polymerase sigma factor, phrog_351 RNA polymerase sigma factor transcription regulation 1 29305 30051
YP_338207.1 NC_007458_p24 phage regulatory protein phrog_3 transcriptional repressor transcription regulation -1 21673 21909
YP_338228.1 NC_007458_p45 hypothetical protein phrog_8934 unknown function unknown function 1 33923 34045
YP_338221.1 NC_007458_p38 hypothetical protein phrog_6214 unknown function unknown function 1 31150 31380
YP_338198.1 NC_007458_p15 minor structural protein phrog_1775 minor head protein head and packaging 1 13325 17191
YP_338189.1 NC_007458_p6 hypothetical protein phrog_40 head-tail adaptor Ad1 connector 1 5374 5664
YP_338202.1 NC_007458_p19 repressor protein, phrog_3 transcriptional repressor transcription regulation -1 18898 19110
YP_338212.1 NC_007458_p29 hypothetical protein phrog_14915 unknown function unknown function 1 25119 25277
YP_338184.1 NC_007458_p1 phage terminase, small subunit, P27 family phrog_83 terminase small subunit head and packaging 1 63 548
YP_338201.1 NC_007458_p18 hypothetical protein phrog_9170 unknown function unknown function -1 18414 18905
YP_338222.1 NC_007458_p39 hypothetical protein phrog_1672 unknown function unknown function 1 31547 31957
YP_338191.1 NC_007458_p8 conserved phage protein, HK97family phrog_5 tail completion or Neck1 protein connector 1 5977 6417
YP_338195.1 NC_007458_p12 hypothetical protein phrog_8548 unknown function unknown function 1 7779 7955
YP_338230.1 NC_007458_p47 hypothetical protein phrog_10998 unknown function unknown function 1 34734 34958
YP_338211.1 NC_007458_p28 transcriptional regulator, phrog_37093 transcriptional regulator transcription regulation -1 24564 24692
YP_338226.1 NC_007458_p43 hypothetical protein phrog_2275 unknown function unknown function 1 33239 33538
YP_338190.1 NC_007458_p7 head-tail adaptor protein phrog_25 head closure Hc1 connector 1 5661 5984
YP_338216.1 NC_007458_p33 phage replication protein, phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 28149 29060
YP_338185.1 NC_007458_p2 phage terminase, large subunit phrog_9 terminase large subunit head and packaging 1 545 2242
YP_338205.1 NC_007458_p22 FtsK/SpoIIIE family protein phrog_1358 FtsK/SpoIIIE-like protein moron, auxiliary metabolic gene and host takeover 1 19836 21080
YP_338231.1 NC_007458_p48 hypothetical protein phrog_2395 unknown function unknown function 1 34965 35186
YP_338234.1 NC_007458_p51 hypothetical protein phrog_16900 unknown function unknown function 1 36162 36332
YP_338197.1 NC_007458_p14 tail component protein phrog_202 distal tail protein Dit tail 1 11826 13328
YP_338229.1 NC_007458_p46 hypothetical protein phrog_36 transcriptional regulator transcription regulation 1 34219 34614
YP_338219.1 NC_007458_p36 hypothetical protein phrog_8281 unknown function unknown function 1 30048 30524
YP_338203.1 NC_007458_p20 hypothetical protein phrog_4616 unknown function unknown function 1 19294 19602
YP_338235.1 NC_007458_p52 hypothetical protein phrog_4705 unknown function unknown function 1 36557 36823
YP_338194.1 NC_007458_p11 hypothetical protein phrog_187 head-tail adaptor connector 1 7432 7749
YP_338200.1 NC_007458_p17 N-acetylmuramoyl-L-alanine amidase phrog_3088 amidase lysis 1 17655 18356