Genomic map of Xanthomonas phage OP2 (NC_007710)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007710
Definition
Xanthomonas oryzae phage OP2 DNA, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae; Naesvirus.
DB of origin
REFSEQ
Length
46643
Host Name
Xanthomonas oryzae
Host domain
Bacteria
Is prophage?
undef
Number of proteins
62
%GC
60.88
Number of singletons
23
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_453679.1 NC_007710_p62 hypothetical protein phrog_12690 unknown function unknown function 1 45969 46523
YP_453627.1 NC_007710_p10 hypothetical protein phrog_2229 head maturation protease head and packaging -1 6201 7370
YP_453664.1 NC_007710_p47 hypothetical protein singleton unknown function unknown function 1 34538 34804
YP_453646.1 NC_007710_p29 hypothetical protein phrog_587 structural protein head and packaging -1 20793 21479
YP_453623.1 NC_007710_p6 hypothetical protein phrog_302 virion structural protein head and packaging -1 3530 4033
YP_453642.1 NC_007710_p25 lytic enzyme phrog_181 endolysin lysis 1 18055 18594
YP_453676.1 NC_007710_p59 hypothetical protein phrog_17223 unknown function unknown function 1 43976 44269
YP_453633.1 NC_007710_p16 hypothetical protein singleton unknown function unknown function 1 13760 14167
YP_453649.1 NC_007710_p32 hypothetical protein singleton unknown function unknown function -1 23426 23668
YP_453654.1 NC_007710_p37 hypothetical protein phrog_18181 unknown function unknown function -1 27492 28109
YP_453658.1 NC_007710_p41 hypothetical protein phrog_16593 DNA primase DNA, RNA and nucleotide metabolism 1 30143 32656
YP_453621.1 NC_007710_p4 hypothetical protein phrog_1912 head protein head and packaging -1 2605 3030
YP_453651.1 NC_007710_p34 tail length tape measure protein phrog_9570 tail length tape measure protein tail -1 24556 26391
YP_453620.1 NC_007710_p3 hypothetical protein phrog_1876 unknown function unknown function -1 2081 2608
YP_453631.1 NC_007710_p14 hypothetical protein phrog_16968 unknown function unknown function -1 11384 11851
YP_453644.1 NC_007710_p27 hypothetical protein phrog_31488 unknown function unknown function 1 18796 19326
YP_453653.1 NC_007710_p36 hypothetical protein phrog_1932 tail assembly chaperone tail -1 27073 27468
YP_453666.1 NC_007710_p49 dUTPase phrog_135 dUTPase DNA, RNA and nucleotide metabolism 1 35414 35887
YP_453632.1 NC_007710_p15 hypothetical protein phrog_69 exonuclease DNA, RNA and nucleotide metabolism 1 12296 13612
YP_453665.1 NC_007710_p48 hypothetical protein singleton unknown function unknown function 1 34996 35244
YP_453672.1 NC_007710_p55 DNA polymerase I phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 40498 42474
YP_453643.1 NC_007710_p26 hypothetical protein phrog_38564 unknown function unknown function 1 18591 18818
YP_453626.1 NC_007710_p9 structural protein phrog_2122 minor head protein head and packaging -1 5654 6244
YP_453634.1 NC_007710_p17 hypothetical protein phrog_16841 unknown function unknown function 1 14245 14877
YP_453659.1 NC_007710_p42 transposase singleton unknown function unknown function 1 32685 32933
YP_453670.1 NC_007710_p53 phage helicase phrog_16 DNA helicase DNA, RNA and nucleotide metabolism 1 38094 39986
YP_453678.1 NC_007710_p61 hypothetical protein phrog_12690 unknown function unknown function 1 45446 46006
YP_453660.1 NC_007710_p43 hypothetical protein singleton unknown function unknown function 1 32958 33272
YP_453663.1 NC_007710_p46 hypothetical protein singleton unknown function unknown function 1 33991 34443
YP_453675.1 NC_007710_p58 hypothetical protein singleton unknown function unknown function 1 43393 43923
YP_453648.1 NC_007710_p31 baseplate protein phrog_11 baseplate spike tail -1 22771 23433
YP_453662.1 NC_007710_p45 hypothetical protein singleton unknown function unknown function 1 33571 33960
YP_453669.1 NC_007710_p52 hypothetical protein singleton unknown function unknown function 1 37394 37672
YP_453624.1 NC_007710_p7 hypothetical protein phrog_2085 unknown function unknown function -1 4046 4468
YP_453657.1 NC_007710_p40 hypothetical protein phrog_120 baseplate wedge subunit tail -1 29246 29671
YP_453655.1 NC_007710_p38 tail fiber protein singleton unknown function unknown function -1 28160 28774
YP_453667.1 NC_007710_p50 hypothetical protein singleton unknown function unknown function 1 35953 36159
YP_453656.1 NC_007710_p39 hypothetical protein phrog_349 virion structural protein head and packaging -1 28848 29249
YP_453628.1 NC_007710_p11 head protein phrog_324 head morphogenesis head and packaging -1 7457 8368
YP_453668.1 NC_007710_p51 hypothetical protein singleton unknown function unknown function 1 36257 36898
YP_453673.1 NC_007710_p56 hypothetical protein singleton unknown function unknown function 1 42510 42791
YP_453641.1 NC_007710_p24 hypothetical protein singleton unknown function unknown function 1 17622 18080
YP_453638.1 NC_007710_p21 HNH family gene phrog_34 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 16025 16429
YP_453640.1 NC_007710_p23 hypothetical protein singleton unknown function unknown function 1 16618 17244
YP_453635.1 NC_007710_p18 hypothetical protein singleton unknown function unknown function 1 14931 15485
YP_453629.1 NC_007710_p12 hypothetical protein phrog_146 portal protein head and packaging -1 8295 9893
YP_453639.1 NC_007710_p22 hypothetical protein singleton unknown function unknown function 1 16439 16621
YP_453637.1 NC_007710_p20 hypothetical protein singleton unknown function unknown function 1 15679 16056
YP_453671.1 NC_007710_p54 hypothetical protein singleton unknown function unknown function 1 40057 40437
YP_453618.1 NC_007710_p1 hypothetical protein phrog_1964 virion structural protein head and packaging -1 126 560
YP_453625.1 NC_007710_p8 structural protein phrog_264 major head protein head and packaging -1 4601 5620
YP_453647.1 NC_007710_p30 hypothetical protein phrog_6 baseplate wedge subunit tail -1 21479 22753
YP_453619.1 NC_007710_p2 hypothetical protein phrog_205 tail sheath tail -1 573 2057
YP_453622.1 NC_007710_p5 RNA polymerase phrog_222 tail completion or Neck1 protein connector -1 3027 3533
YP_453630.1 NC_007710_p13 terminase large subunit phrog_38 terminase large subunit head and packaging -1 9936 11387
YP_453674.1 NC_007710_p57 hypothetical protein singleton unknown function unknown function 1 42788 43033
YP_453652.1 NC_007710_p35 hypothetical protein phrog_1830 unknown function unknown function -1 26395 27069
YP_453645.1 NC_007710_p28 hypothetical protein phrog_12796 tail fiber protein tail -1 19369 20784
YP_453661.1 NC_007710_p44 hypothetical protein phrog_17526 unknown function unknown function 1 33282 33554
YP_453677.1 NC_007710_p60 hypothetical protein singleton unknown function unknown function 1 44287 45063
YP_453650.1 NC_007710_p33 hypothetical protein phrog_196 baseplate hub tail -1 23652 24551
YP_453636.1 NC_007710_p19 hypothetical protein singleton unknown function unknown function 1 15395 15682