| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007804 |
Definition |
Escherichia phage phiV10, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus. |
DB of origin |
REFSEQ |
Length |
39104 |
Host Name |
Escherichia coli |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
48.97 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_512308.1 | NC_007804_p53 | hypothetical protein | phrog_60 | unknown function | unknown function | 1 | 37798 | 38499 |
| YP_512301.1 | NC_007804_p46 | eae-like protein | phrog_492 | unknown function | unknown function | 1 | 35556 | 36131 |
| YP_512310.1 | NC_007804_p55 | hypothetical protein | phrog_536 | transcriptional regulator | transcription regulation | 1 | 38766 | 39104 |
| YP_512263.1 | NC_007804_p8 | protease | phrog_458 | protease | other | 1 | 5553 | 6248 |
| YP_512275.1 | NC_007804_p20 | integral membrane protein | phrog_7892 | unknown function | unknown function | 1 | 19345 | 19485 |
| YP_512257.1 | NC_007804_p3 | hypothetical protein | phrog_322 | unknown function | unknown function | -1 | 2278 | 2649 |
| YP_512293.1 | NC_007804_p38 | hypothetical protein | phrog_856 | unknown function | unknown function | -1 | 31479 | 31778 |
| YP_512269.1 | NC_007804_p14 | hypothetical protein | phrog_376 | tail protein | tail | 1 | 9063 | 11534 |
| YP_512278.1 | NC_007804_p23 | hypothetical protein | phrog_450 | unknown function | unknown function | -1 | 20543 | 20800 |
| YP_512277.1 | NC_007804_p22 | anti-immunity protein | phrog_130 | anti-repressor Ant | transcription regulation | -1 | 19646 | 20230 |
| YP_512262.1 | NC_007804_p7 | hypothetical protein | phrog_528 | unknown function | unknown function | 1 | 5254 | 5550 |
| YP_512266.1 | NC_007804_p11 | hypothetical protein | phrog_590 | unknown function | unknown function | 1 | 7749 | 8084 |
| YP_512306.2 | NC_007804_p51 | hypothetical protein | phrog_1380 | unknown function | unknown function | 1 | 37318 | 37590 |
| YP_512261.1 | NC_007804_p6 | hypothetical protein | phrog_332 | head-tail adaptor | connector | 1 | 3578 | 5257 |
| YP_512264.1 | NC_007804_p9 | major capsid protein | phrog_212 | major head protein | head and packaging | 1 | 6263 | 7249 |
| YP_512289.2 | NC_007804_p34 | transcriptional activator | phrog_868 | transcriptional activator | transcription regulation | -1 | 29015 | 29281 |
| YP_512280.1 | NC_007804_p25 | O-acetyltransferase | phrog_3333 | O-acetyltransferase | other | -1 | 23636 | 24652 |
| YP_512298.1 | NC_007804_p43 | primosomal protein | phrog_1032 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 33423 | 34250 |
| YP_512309.1 | NC_007804_p54 | hypothetical protein | phrog_625 | unknown function | unknown function | 1 | 38492 | 38773 |
| YP_512268.1 | NC_007804_p13 | hypothetical protein | phrog_394 | tail protein | tail | 1 | 8458 | 9063 |
| YP_512267.1 | NC_007804_p12 | hypothetical protein | phrog_825 | unknown function | unknown function | 1 | 8135 | 8458 |
| YP_512281.1 | NC_007804_p26 | integral membrane protein | phrog_198 | holin | lysis | 1 | 24812 | 25216 |
| YP_512299.2 | NC_007804_p44 | replication protein p | phrog_109 | P-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 34247 | 35032 |
| YP_512286.1 | NC_007804_p31 | integrase | phrog_1 | integrase | integration and excision | 1 | 26927 | 28177 |
| YP_512282.1 | NC_007804_p27 | holin | phrog_217 | holin | lysis | 1 | 25203 | 25511 |
| YP_512256.1 | NC_007804_p2 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 712 | 2187 |
| YP_512296.1 | NC_007804_p41 | hypothetical protein | phrog_35 | transcriptional repressor | transcription regulation | 1 | 32826 | 33056 |
| YP_512255.2 | NC_007804_p1 | terminase small subunit | phrog_51 | terminase small subunit | head and packaging | 1 | 41 | 715 |
| YP_512274.1 | NC_007804_p19 | structural protein | phrog_684 | virion structural protein | head and packaging | 1 | 16861 | 19335 |
| YP_512273.1 | NC_007804_p18 | hypothetical protein | phrog_1145 | unknown function | unknown function | 1 | 15053 | 16855 |
| YP_512270.1 | NC_007804_p15 | hypothetical protein | phrog_308 | internal virion protein | head and packaging | 1 | 11534 | 11998 |
| YP_512260.1 | NC_007804_p5 | hypothetical protein | phrog_831 | unknown function | unknown function | 1 | 3357 | 3563 |
| YP_512295.1 | NC_007804_p40 | transcriptional repressor | phrog_8 | transcriptional regulator | transcription regulation | -1 | 32087 | 32671 |
| YP_512305.1 | NC_007804_p50 | hypothetical protein | phrog_1380 | unknown function | unknown function | 1 | 37220 | 37402 |
| YP_512271.1 | NC_007804_p16 | hypothetical protein | phrog_418 | internal virion protein | head and packaging | 1 | 11998 | 12543 |
| YP_512276.1 | NC_007804_p21 | hypothetical protein | singleton | unknown function | unknown function | -1 | 19551 | 19640 |
| YP_512307.1 | NC_007804_p52 | hypothetical protein | phrog_926 | unknown function | unknown function | 1 | 37592 | 37801 |
| YP_512300.1 | NC_007804_p45 | hypothetical protein | phrog_190 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 35150 | 35494 |
| YP_512292.1 | NC_007804_p37 | recET | phrog_561 | RecT-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 29722 | 31482 |
| YP_512288.1 | NC_007804_p33 | adenine methylase | phrog_359 | DNA methyltransferase | other | -1 | 28372 | 29022 |
| YP_512303.1 | NC_007804_p48 | hypothetical protein | phrog_250 | unknown function | unknown function | 1 | 36349 | 37047 |
| YP_512283.1 | NC_007804_p28 | endolysin | phrog_181 | endolysin | lysis | 1 | 25501 | 26130 |
| YP_512294.1 | NC_007804_p39 | hypothetical protein | phrog_898 | unknown function | unknown function | -1 | 31781 | 31933 |
| YP_512297.1 | NC_007804_p42 | hypothetical protein | phrog_1081 | unknown function | unknown function | 1 | 33207 | 33407 |
| YP_512291.1 | NC_007804_p36 | transcriptional regulator | phrog_66 | excisionase and transcriptional regulator | integration and excision | -1 | 29424 | 29672 |
| YP_512279.1 | NC_007804_p24 | tail fiber | phrog_4818 | tail fiber protein | tail | 1 | 20996 | 23623 |
| YP_512287.1 | NC_007804_p32 | hypothetical protein | phrog_292 | unknown function | unknown function | -1 | 28181 | 28375 |
| YP_512258.2 | NC_007804_p4 | hypothetical protein | phrog_4647 | unknown function | unknown function | 1 | 2672 | 2923 |
| YP_512304.1 | NC_007804_p49 | hypothetical protein | phrog_13831 | unknown function | unknown function | 1 | 37047 | 37223 |
| YP_512285.1 | NC_007804_p30 | rz1-like protein | phrog_11621 | Rz-like spanin | lysis | 1 | 26326 | 26601 |
| YP_512284.1 | NC_007804_p29 | lysis accessory protein | phrog_312 | Rz-like spanin | lysis | 1 | 26127 | 26609 |
| YP_512272.1 | NC_007804_p17 | hypothetical structural protein | phrog_992 | head protein | head and packaging | 1 | 12543 | 15056 |
| YP_512302.1 | NC_007804_p47 | hypothetical protein | phrog_4132 | unknown function | unknown function | 1 | 36128 | 36352 |
| YP_512265.1 | NC_007804_p10 | hypothetical protein | phrog_427 | unknown function | unknown function | 1 | 7301 | 7738 |
| YP_512290.1 | NC_007804_p35 | integral membrane protein | phrog_17484 | membrane protein | moron, auxiliary metabolic gene and host takeover | -1 | 29311 | 29427 |