Genomic map of Escherichia phage phiV10 (NC_007804)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007804
Definition
Escherichia phage phiV10, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae; Uetakevirus.
DB of origin
REFSEQ
Length
39104
Host Name
Escherichia coli
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
48.97
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_512308.1 NC_007804_p53 hypothetical protein phrog_60 unknown function unknown function 1 37798 38499
YP_512301.1 NC_007804_p46 eae-like protein phrog_492 unknown function unknown function 1 35556 36131
YP_512310.1 NC_007804_p55 hypothetical protein phrog_536 transcriptional regulator transcription regulation 1 38766 39104
YP_512263.1 NC_007804_p8 protease phrog_458 protease other 1 5553 6248
YP_512275.1 NC_007804_p20 integral membrane protein phrog_7892 unknown function unknown function 1 19345 19485
YP_512257.1 NC_007804_p3 hypothetical protein phrog_322 unknown function unknown function -1 2278 2649
YP_512293.1 NC_007804_p38 hypothetical protein phrog_856 unknown function unknown function -1 31479 31778
YP_512269.1 NC_007804_p14 hypothetical protein phrog_376 tail protein tail 1 9063 11534
YP_512278.1 NC_007804_p23 hypothetical protein phrog_450 unknown function unknown function -1 20543 20800
YP_512277.1 NC_007804_p22 anti-immunity protein phrog_130 anti-repressor Ant transcription regulation -1 19646 20230
YP_512262.1 NC_007804_p7 hypothetical protein phrog_528 unknown function unknown function 1 5254 5550
YP_512266.1 NC_007804_p11 hypothetical protein phrog_590 unknown function unknown function 1 7749 8084
YP_512306.2 NC_007804_p51 hypothetical protein phrog_1380 unknown function unknown function 1 37318 37590
YP_512261.1 NC_007804_p6 hypothetical protein phrog_332 head-tail adaptor connector 1 3578 5257
YP_512264.1 NC_007804_p9 major capsid protein phrog_212 major head protein head and packaging 1 6263 7249
YP_512289.2 NC_007804_p34 transcriptional activator phrog_868 transcriptional activator transcription regulation -1 29015 29281
YP_512280.1 NC_007804_p25 O-acetyltransferase phrog_3333 O-acetyltransferase other -1 23636 24652
YP_512298.1 NC_007804_p43 primosomal protein phrog_1032 replication initiation protein DNA, RNA and nucleotide metabolism 1 33423 34250
YP_512309.1 NC_007804_p54 hypothetical protein phrog_625 unknown function unknown function 1 38492 38773
YP_512268.1 NC_007804_p13 hypothetical protein phrog_394 tail protein tail 1 8458 9063
YP_512267.1 NC_007804_p12 hypothetical protein phrog_825 unknown function unknown function 1 8135 8458
YP_512281.1 NC_007804_p26 integral membrane protein phrog_198 holin lysis 1 24812 25216
YP_512299.2 NC_007804_p44 replication protein p phrog_109 P-like helicase loader DNA, RNA and nucleotide metabolism 1 34247 35032
YP_512286.1 NC_007804_p31 integrase phrog_1 integrase integration and excision 1 26927 28177
YP_512282.1 NC_007804_p27 holin phrog_217 holin lysis 1 25203 25511
YP_512256.1 NC_007804_p2 terminase large subunit phrog_2 terminase large subunit head and packaging 1 712 2187
YP_512296.1 NC_007804_p41 hypothetical protein phrog_35 transcriptional repressor transcription regulation 1 32826 33056
YP_512255.2 NC_007804_p1 terminase small subunit phrog_51 terminase small subunit head and packaging 1 41 715
YP_512274.1 NC_007804_p19 structural protein phrog_684 virion structural protein head and packaging 1 16861 19335
YP_512273.1 NC_007804_p18 hypothetical protein phrog_1145 unknown function unknown function 1 15053 16855
YP_512270.1 NC_007804_p15 hypothetical protein phrog_308 internal virion protein head and packaging 1 11534 11998
YP_512260.1 NC_007804_p5 hypothetical protein phrog_831 unknown function unknown function 1 3357 3563
YP_512295.1 NC_007804_p40 transcriptional repressor phrog_8 transcriptional regulator transcription regulation -1 32087 32671
YP_512305.1 NC_007804_p50 hypothetical protein phrog_1380 unknown function unknown function 1 37220 37402
YP_512271.1 NC_007804_p16 hypothetical protein phrog_418 internal virion protein head and packaging 1 11998 12543
YP_512276.1 NC_007804_p21 hypothetical protein singleton unknown function unknown function -1 19551 19640
YP_512307.1 NC_007804_p52 hypothetical protein phrog_926 unknown function unknown function 1 37592 37801
YP_512300.1 NC_007804_p45 hypothetical protein phrog_190 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 35150 35494
YP_512292.1 NC_007804_p37 recET phrog_561 RecT-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 29722 31482
YP_512288.1 NC_007804_p33 adenine methylase phrog_359 DNA methyltransferase other -1 28372 29022
YP_512303.1 NC_007804_p48 hypothetical protein phrog_250 unknown function unknown function 1 36349 37047
YP_512283.1 NC_007804_p28 endolysin phrog_181 endolysin lysis 1 25501 26130
YP_512294.1 NC_007804_p39 hypothetical protein phrog_898 unknown function unknown function -1 31781 31933
YP_512297.1 NC_007804_p42 hypothetical protein phrog_1081 unknown function unknown function 1 33207 33407
YP_512291.1 NC_007804_p36 transcriptional regulator phrog_66 excisionase and transcriptional regulator integration and excision -1 29424 29672
YP_512279.1 NC_007804_p24 tail fiber phrog_4818 tail fiber protein tail 1 20996 23623
YP_512287.1 NC_007804_p32 hypothetical protein phrog_292 unknown function unknown function -1 28181 28375
YP_512258.2 NC_007804_p4 hypothetical protein phrog_4647 unknown function unknown function 1 2672 2923
YP_512304.1 NC_007804_p49 hypothetical protein phrog_13831 unknown function unknown function 1 37047 37223
YP_512285.1 NC_007804_p30 rz1-like protein phrog_11621 Rz-like spanin lysis 1 26326 26601
YP_512284.1 NC_007804_p29 lysis accessory protein phrog_312 Rz-like spanin lysis 1 26127 26609
YP_512272.1 NC_007804_p17 hypothetical structural protein phrog_992 head protein head and packaging 1 12543 15056
YP_512302.1 NC_007804_p47 hypothetical protein phrog_4132 unknown function unknown function 1 36128 36352
YP_512265.1 NC_007804_p10 hypothetical protein phrog_427 unknown function unknown function 1 7301 7738
YP_512290.1 NC_007804_p35 integral membrane protein phrog_17484 membrane protein moron, auxiliary metabolic gene and host takeover -1 29311 29427