Genomic map of Pseudomonas phage F10 (NC_007805)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007805
Definition
Pseudomonas phage F10, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
39199
Host Name
Pseudomonas aeruginosa
Host domain
Bacteria
Is prophage?
undef
Number of proteins
63
%GC
62.08
Number of singletons
3
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_001293347.1 NC_007805_p3 hypothetical protein phrog_118 head-tail adaptor connector 1 2554 2769
YP_001293372.1 NC_007805_p28 Integrase phrog_1 integrase integration and excision -1 20558 21607
YP_001293403.1 NC_007805_p59 Conserved hypothetical protein phrog_518 Rha-like transcriptional regulator transcription regulation 1 36329 36859
YP_001293398.1 NC_007805_p54 DnaB-like replicative helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 32597 34027
YP_001293369.1 NC_007805_p25 hypothetical protein phrog_2712 tail fiber protein tail 1 19190 19792
YP_001293382.1 NC_007805_p38 Conserved hypothetical protein phrog_3282 sigma factor transcription regulation -1 25417 25800
YP_001293350.1 NC_007805_p6 hypothetical protein phrog_122 head decoration head and packaging 1 6535 6852
YP_001293396.1 NC_007805_p52 hypothetical protein phrog_16167 replication initiation protein DNA, RNA and nucleotide metabolism 1 30931 31815
YP_001293348.1 NC_007805_p4 portal protein phrog_21 portal protein head and packaging 1 2769 4415
YP_001293406.1 NC_007805_p62 lysis protein Rz phrog_13 Rz-like spanin lysis 1 37911 38360
YP_001293351.1 NC_007805_p7 hypothetical protein phrog_7243 unknown function unknown function 1 6849 7178
YP_001293366.1 NC_007805_p22 hypothetical protein phrog_9891 unknown function unknown function 1 18159 18350
YP_001293402.1 NC_007805_p58 hypothetical protein phrog_3412 unknown function unknown function 1 35359 35916
YP_001293380.1 NC_007805_p36 Conserved hypothetical protein phrog_130 anti-repressor Ant transcription regulation -1 24308 25105
YP_001293365.1 NC_007805_p21 hypothetical protein phrog_1084 unknown function unknown function 1 17579 18166
YP_001293384.1 NC_007805_p40 Cro repressor phrog_35 transcriptional repressor transcription regulation 1 26748 26969
YP_001293387.1 NC_007805_p43 hypothetical protein phrog_12707 unknown function unknown function 1 27876 28226
YP_001293371.1 NC_007805_p27 hypothetical protein phrog_2687 unknown function unknown function 1 20091 20324
YP_001293360.1 NC_007805_p16 hypothetical protein phrog_5842 unknown function unknown function 1 12824 14521
YP_001293394.1 NC_007805_p50 hypothetical protein phrog_7732 transcriptional regulator transcription regulation 1 30510 30740
YP_001293401.1 NC_007805_p57 hypothetical protein phrog_4935 unknown function unknown function 1 35078 35362
YP_001293376.1 NC_007805_p32 hypothetical protein phrog_3765 unknown function unknown function -1 22797 22919
YP_001293359.1 NC_007805_p15 hypothetical protein phrog_5314 unknown function unknown function 1 12432 12824
YP_001293355.1 NC_007805_p11 hypothetical protein phrog_11596 unknown function unknown function 1 8679 9311
YP_001293358.1 NC_007805_p14 hypothetical protein phrog_5314 unknown function unknown function 1 12303 12824
YP_001293375.1 NC_007805_p31 hypothetical protein phrog_8961 unknown function unknown function -1 22606 22800
YP_001293362.1 NC_007805_p18 hypothetical protein phrog_9464 unknown function unknown function 1 14934 15479
YP_001293397.1 NC_007805_p53 DNA replication protein DnaC phrog_50 DnaC-like helicase loader DNA, RNA and nucleotide metabolism 1 31812 32600
YP_001293399.1 NC_007805_p55 hypothetical protein phrog_6158 unknown function unknown function 1 34087 34395
YP_001293370.1 NC_007805_p26 hypothetical protein phrog_2398 unknown function unknown function 1 19792 20094
YP_001293345.1 NC_007805_p1 small subunit (Nu1 homolog) of DNA packaging dimer phrog_57 terminase small subunit head and packaging 1 67 612
YP_001293349.1 NC_007805_p5 Clp protease phrog_133 head maturation protease head and packaging 1 4387 6468
YP_001293373.1 NC_007805_p29 hypothetical protein phrog_4764 excisionase integration and excision -1 21607 21849
YP_001293392.1 NC_007805_p48 hypothetical protein phrog_19529 unknown function unknown function 1 29414 29749
YP_001293405.1 NC_007805_p61 Predicted chitinase phrog_181 endolysin lysis 1 37273 37890
YP_001293391.1 NC_007805_p47 hypothetical protein phrog_24223 unknown function unknown function 1 29092 29421
YP_001293378.1 NC_007805_p34 hypothetical protein phrog_7514 unknown function unknown function -1 23665 24000
YP_001293368.1 NC_007805_p24 hypothetical protein phrog_7980 unknown function unknown function 1 18916 19197
YP_001293388.1 NC_007805_p44 hypothetical protein phrog_6327 unknown function unknown function 1 28223 28501
YP_001293383.1 NC_007805_p39 Repressor protein phrog_4 transcriptional repressor transcription regulation -1 25986 26660
YP_001293404.1 NC_007805_p60 Holin phrog_126 holin/anti-holin lysis 1 36944 37276
YP_001293346.1 NC_007805_p2 large subunit (GpA homolog) of DNA packaging dimer phrog_15 terminase large subunit head and packaging 1 584 2563
YP_001293400.1 NC_007805_p56 metallophosphoesterase phrog_246 NinI-like serine-threonine phosphatase other 1 34392 35081
YP_001293357.1 NC_007805_p13 tail length tape measure protein phrog_28 tail length tape measure protein tail 1 9780 12263
YP_001293390.1 NC_007805_p46 hypothetical protein phrog_12894 unknown function unknown function 1 28799 29095
YP_001293353.1 NC_007805_p9 hypothetical protein phrog_3357 unknown function unknown function 1 7649 7843
YP_001293363.1 NC_007805_p19 hypothetical protein phrog_7250 unknown function unknown function 1 15490 15894
YP_001293407.1 NC_007805_p63 hypothetical protein phrog_1924 minor tail protein tail 1 38357 39100
YP_001293393.1 NC_007805_p49 DNA-binding protein (Roi) phrog_63 anti-repressor Ant transcription regulation 1 29746 30513
YP_001293379.1 NC_007805_p35 hypothetical protein phrog_2685 partition protein ATPase other -1 24003 24233
YP_001293385.1 NC_007805_p41 hypothetical protein phrog_12729 unknown function unknown function 1 27178 27570
YP_001293374.1 NC_007805_p30 hypothetical protein phrog_7215 unknown function unknown function -1 21833 22609
YP_001293389.1 NC_007805_p45 hypothetical protein singleton unknown function unknown function 1 28498 28806
YP_001293381.1 NC_007805_p37 hypothetical protein phrog_27325 unknown function unknown function -1 25116 25406
YP_001293377.1 NC_007805_p33 Conserved hypothetical protein phrog_28713 unknown function unknown function -1 22916 23668
YP_001293367.1 NC_007805_p23 hypothetical protein phrog_7946 unknown function unknown function 1 18322 18915
YP_001293364.1 NC_007805_p20 hypothetical protein phrog_11921 unknown function unknown function 1 15891 17549
YP_001293361.1 NC_007805_p17 hypothetical protein phrog_6427 unknown function unknown function 1 14524 14934
YP_001293354.1 NC_007805_p10 hypothetical protein phrog_807 major tail protein with Ig-like domain tail 1 7845 8597
YP_001293386.1 NC_007805_p42 hypothetical protein singleton unknown function unknown function 1 27509 27769
YP_001293356.1 NC_007805_p12 hypothetical protein phrog_7608 unknown function unknown function 1 9375 9677
YP_001293395.1 NC_007805_p51 hypothetical protein singleton unknown function unknown function 1 30737 30931
YP_001293352.1 NC_007805_p8 hypothetical protein phrog_5185 unknown function unknown function 1 7175 7645