| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007814 |
Definition |
Bacillus phage Fah, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Wbetavirus; unclassified Wbetavirus. |
DB of origin |
REFSEQ |
Length |
37974 |
Host Name |
Bacillus cereus |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
50 |
%GC |
34.94 |
Number of singletons |
0 |
Number of paralogs |
2 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_512336.1 | NC_007814_p26 | HTH transcriptional regulator | phrog_1728 | transcriptional regulator | transcription regulation | 1 | 24656 | 25990 |
| YP_512340.1 | NC_007814_p30 | hypothetical protein | phrog_4292 | unknown function | unknown function | 1 | 27344 | 27499 |
| YP_512357.1 | NC_007814_p47 | hypothetical protein | phrog_16900 | unknown function | unknown function | 1 | 36883 | 37053 |
| YP_512327.1 | NC_007814_p17 | lipoprotein | phrog_9170 | unknown function | unknown function | -1 | 18405 | 18902 |
| YP_512343.1 | NC_007814_p33 | DnaA analog, DnaD domain protein | phrog_1701 | DnaD-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 29160 | 30101 |
| YP_512333.1 | NC_007814_p23 | transcription regulator | phrog_3 | transcriptional repressor | transcription regulation | -1 | 21664 | 21900 |
| YP_512319.1 | NC_007814_p9 | structural protein | phrog_78 | tail terminator | connector | 1 | 6405 | 6764 |
| YP_512324.1 | NC_007814_p14 | structural protein | phrog_1775 | minor head protein | head and packaging | 1 | 13316 | 17182 |
| YP_512347.1 | NC_007814_p37 | mannose-6-phosphate isomerase | phrog_13536 | unknown function | unknown function | -1 | 32475 | 33008 |
| YP_512335.1 | NC_007814_p25 | site-specific serine recombinase | phrog_95 | integrase | integration and excision | 1 | 23099 | 24553 |
| YP_512323.1 | NC_007814_p13 | tail protein | phrog_202 | distal tail protein Dit | tail | 1 | 11817 | 13319 |
| YP_512314.1 | NC_007814_p4 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 3510 | 4130 |
| YP_512341.1 | NC_007814_p31 | antirepressor | phrog_463 | anti-repressor | transcription regulation | 1 | 27517 | 28332 |
| YP_512356.1 | NC_007814_p46 | hypothetical protein | phrog_1315 | unknown function | unknown function | 1 | 36671 | 36886 |
| YP_512317.1 | NC_007814_p7 | head-tail adaptor | phrog_25 | head closure Hc1 | connector | 1 | 5652 | 5975 |
| YP_512318.1 | NC_007814_p8 | head-tail joining protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 5968 | 6408 |
| YP_512348.1 | NC_007814_p38 | hypothetical protein | phrog_18684 | unknown function | unknown function | 1 | 33595 | 33765 |
| YP_512352.1 | NC_007814_p42 | distantly related to ECF sigma subunit | phrog_10998 | unknown function | unknown function | 1 | 35455 | 35679 |
| YP_512358.1 | NC_007814_p48 | hypothetical protein | phrog_9119 | unknown function | unknown function | 1 | 37085 | 37276 |
| YP_512349.1 | NC_007814_p39 | hypothetical protein | phrog_2275 | unknown function | unknown function | 1 | 33954 | 34259 |
| YP_512337.1 | NC_007814_p27 | transcription regulator | phrog_8 | transcriptional regulator | transcription regulation | -1 | 26331 | 26687 |
| YP_512328.1 | NC_007814_p18 | HTH transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | -1 | 18889 | 19101 |
| YP_512351.1 | NC_007814_p41 | HTH transcription regulator | phrog_36 | transcriptional regulator | transcription regulation | 1 | 34928 | 35335 |
| YP_512316.1 | NC_007814_p6 | DNA packaging protein | phrog_40 | head-tail adaptor Ad1 | connector | 1 | 5365 | 5655 |
| YP_512331.1 | NC_007814_p21 | FtsK/SpoIIIE ATPase | phrog_1358 | FtsK/SpoIIIE-like protein | moron, auxiliary metabolic gene and host takeover | 1 | 19782 | 21071 |
| YP_512359.1 | NC_007814_p49 | hypothetical protein | phrog_4705 | unknown function | unknown function | 1 | 37278 | 37544 |
| YP_512339.1 | NC_007814_p29 | hypothetical protein | phrog_14915 | unknown function | unknown function | 1 | 27114 | 27272 |
| YP_512311.1 | NC_007814_p1 | terminase small subunit | phrog_83 | terminase small subunit | head and packaging | 1 | 54 | 539 |
| YP_512342.1 | NC_007814_p32 | hypothetical protein | phrog_6329 | unknown function | unknown function | 1 | 28399 | 29052 |
| YP_512346.1 | NC_007814_p36 | sigma70 factor | phrog_351 | RNA polymerase sigma factor | transcription regulation | 1 | 31273 | 32019 |
| YP_512354.1 | NC_007814_p44 | hypothetical protein | phrog_9442 | unknown function | unknown function | 1 | 35912 | 36316 |
| YP_512313.1 | NC_007814_p3 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2258 | 3547 |
| YP_512345.1 | NC_007814_p35 | hypothetical protein | phrog_8412 | unknown function | unknown function | 1 | 31047 | 31280 |
| YP_512325.1 | NC_007814_p15 | holin | phrog_199 | holin | lysis | 1 | 17221 | 17646 |
| YP_512321.1 | NC_007814_p11 | hypothetical protein | phrog_187 | head-tail adaptor | connector | 1 | 7423 | 7740 |
| YP_512315.1 | NC_007814_p5 | major head protein | phrog_10 | major head protein | head and packaging | 1 | 4169 | 5347 |
| YP_512312.1 | NC_007814_p2 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 536 | 2233 |
| YP_512326.1 | NC_007814_p16 | N-acetylmuramoyl-L-alanine amidase | phrog_3088 | amidase | lysis | 1 | 17646 | 18347 |
| YP_512355.1 | NC_007814_p45 | hypothetical protein | phrog_11511 | unknown function | unknown function | 1 | 36421 | 36612 |
| YP_512338.1 | NC_007814_p28 | Cro/CI family transcription regulator | phrog_3 | transcriptional repressor | transcription regulation | 1 | 26847 | 27074 |
| YP_512332.1 | NC_007814_p22 | hypothetical protein | phrog_2190 | replication initiation protein | DNA, RNA and nucleotide metabolism | 1 | 21049 | 21630 |
| YP_512329.1 | NC_007814_p19 | hypothetical protein | phrog_4616 | unknown function | unknown function | 1 | 19285 | 19593 |
| YP_512334.1 | NC_007814_p24 | transcription regulator | phrog_1835 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 22169 | 23032 |
| YP_512330.1 | NC_007814_p20 | hypothetical protein | phrog_5703 | unknown function | unknown function | 1 | 19590 | 19772 |
| YP_512344.1 | NC_007814_p34 | DnaC, helicase loader | phrog_50 | DnaC-like helicase loader | DNA, RNA and nucleotide metabolism | 1 | 30117 | 31028 |
| YP_512322.1 | NC_007814_p12 | tail length tape measure protein | phrog_1533 | tail length tape measure protein | tail | 1 | 7963 | 11814 |
| YP_512350.1 | NC_007814_p40 | hypothetical protein | phrog_1235 | unknown function | unknown function | 1 | 34252 | 34491 |
| YP_512320.1 | NC_007814_p10 | major tail protein | phrog_88 | major tail protein | tail | 1 | 6765 | 7373 |
| YP_512360.1 | NC_007814_p50 | HNH endonuclease | phrog_144 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 37544 | 37927 |
| YP_512353.1 | NC_007814_p43 | hypothetical protein | phrog_2395 | unknown function | unknown function | 1 | 35722 | 35907 |