Genomic map of Lactobacillus phage KC5a (NC_007924)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007924
Definition
Lactobacillus phage KC5a, complete genome.
Molecule type
DNA
Genome structure
circular
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Myoviridae.
DB of origin
REFSEQ
Length
38239
Host Name
Lactobacillus gasseri
Host domain
Bacteria
Is prophage?
undef
Number of proteins
61
%GC
36.89
Number of singletons
6
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_529865.1 NC_007924_p30 hypothetical protein singleton unknown function unknown function -1 12990 13103
YP_529857.1 NC_007924_p22 holiday junction resolvase phrog_140 RusA-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 9586 10047
YP_529854.1 NC_007924_p19 hypothetical protein phrog_1945 unknown function unknown function 1 8909 9208
YP_529847.1 NC_007924_p12 phage replication protein phrog_428 replication initiation protein DNA, RNA and nucleotide metabolism 1 5571 6479
YP_529846.1 NC_007924_p11 hypothetical protein phrog_8492 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 4752 5555
YP_529849.1 NC_007924_p14 hypothetical protein phrog_35711 unknown function unknown function 1 6843 7424
YP_529874.1 NC_007924_p39 phage major capsid protein phrog_422 major head protein head and packaging 1 19837 20877
YP_529894.1 NC_007924_p59 hypothetical protein phrog_6664 unknown function unknown function 1 36076 36354
YP_529861.1 NC_007924_p26 hypothetical protein phrog_22933 unknown function unknown function 1 11035 11202
YP_529855.1 NC_007924_p20 hypothetical protein singleton unknown function unknown function 1 9211 9513
YP_529892.1 NC_007924_p57 hypothetical protein phrog_134 unknown function unknown function 1 35495 35695
YP_529870.1 NC_007924_p35 phage terminase large subunit B phrog_2 terminase large subunit head and packaging 1 15382 16611
YP_529845.1 NC_007924_p10 hypothetical protein phrog_7634 unknown function unknown function 1 4468 4746
YP_529838.1 NC_007924_p3 hypothetical protein phrog_87 metallo-protease other -1 2000 2284
YP_529867.1 NC_007924_p32 hypothetical protein phrog_32324 unknown function unknown function 1 13951 14133
YP_529883.1 NC_007924_p48 minor tail protein phrog_1204 tail protein tail 1 25176 28730
YP_529841.1 NC_007924_p6 hypothetical protein phrog_823 unknown function unknown function 1 3208 3543
YP_529895.1 NC_007924_p60 holin phrog_10813 holin lysis 1 36323 36769
YP_529889.1 NC_007924_p54 hypothetical protein phrog_521 tail protein tail 1 32307 32867
YP_529840.1 NC_007924_p5 CI-like repressor phrog_3 transcriptional repressor transcription regulation 1 2951 3175
YP_529878.1 NC_007924_p43 hypothetical protein phrog_525 unknown function unknown function 1 22062 22469
YP_529868.1 NC_007924_p33 phage terminase large subunit A phrog_13702 terminase large subunit head and packaging 1 14153 14809
YP_529856.1 NC_007924_p21 hypothetical protein singleton unknown function unknown function 1 9503 9589
YP_529875.1 NC_007924_p40 hypothetical protein singleton unknown function unknown function 1 21066 21275
YP_529884.1 NC_007924_p49 LysM-like protein phrog_380 endolysin lysis 1 28732 29412
YP_529882.1 NC_007924_p47 hypothetical protein phrog_389 tail protein XkdN-like tail 1 24520 24939
YP_529839.1 NC_007924_p4 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 2457 2723
YP_529887.1 NC_007924_p52 hypothetical protein phrog_120 baseplate wedge subunit tail 1 30753 31169
YP_529869.1 NC_007924_p34 phage terminase small subunit phrog_51 terminase small subunit head and packaging 1 14871 15410
YP_529848.1 NC_007924_p13 transcriptional regulator phrog_8 transcriptional regulator transcription regulation 1 6487 6840
YP_529836.1 NC_007924_p1 integrase phrog_1 integrase integration and excision -1 121 1242
YP_529879.1 NC_007924_p44 hypothetical protein phrog_966 unknown function unknown function 1 22453 22671
YP_529842.1 NC_007924_p7 hypothetical protein phrog_18877 unknown function unknown function 1 3512 3820
YP_529893.1 NC_007924_p58 hypothetical protein phrog_4325 holin lysis 1 35733 36065
YP_529877.1 NC_007924_p42 hypothetical protein phrog_5 tail completion or Neck1 protein connector 1 21631 22065
YP_529853.1 NC_007924_p18 hypothetical protein phrog_17798 unknown function unknown function 1 8695 8904
YP_529850.1 NC_007924_p15 hypothetical protein singleton unknown function unknown function 1 7417 7728
YP_529872.1 NC_007924_p37 phage head protein phrog_115 minor head protein head and packaging 1 18004 19158
YP_529881.1 NC_007924_p46 phage core tail protein phrog_365 tail protein tail 1 24038 24508
YP_529890.1 NC_007924_p55 hypothetical protein phrog_12519 unknown function unknown function 1 32880 34955
YP_529852.1 NC_007924_p17 hypothetical protein phrog_8594 unknown function unknown function 1 8501 8719
YP_529862.1 NC_007924_p27 hypothetical protein phrog_248 transcriptional activator transcription regulation 1 11232 11762
YP_529891.1 NC_007924_p56 hypothetical protein phrog_8791 unknown function unknown function 1 34995 35495
YP_529880.1 NC_007924_p45 phage sheath tail protein phrog_279 tail sheath tail 1 22671 24026
YP_529859.1 NC_007924_p24 hypothetical protein phrog_16953 unknown function unknown function 1 10492 10827
YP_529886.1 NC_007924_p51 hypothetical protein phrog_579 unknown function unknown function 1 30434 30796
YP_529873.1 NC_007924_p38 phage minor capsid protein phrog_194 head scaffolding protein head and packaging 1 19278 19832
YP_529860.1 NC_007924_p25 hypothetical protein phrog_17520 unknown function unknown function 1 10830 11048
YP_529851.1 NC_007924_p16 anti-repressor phrog_63 anti-repressor Ant transcription regulation 1 7706 8419
YP_529837.1 NC_007924_p2 hypothetical protein phrog_6148 beta-lactamase-inhibitor protein BLIP moron, auxiliary metabolic gene and host takeover -1 1312 1935
YP_529844.1 NC_007924_p9 hypothetical protein phrog_16169 unknown function unknown function 1 4142 4468
YP_529863.1 NC_007924_p28 hypothetical protein singleton unknown function unknown function 1 12217 12501
YP_529885.1 NC_007924_p50 hypothetical protein phrog_400 tail protein tail 1 29409 30455
YP_529864.1 NC_007924_p29 transcriptional regulator phrog_18056 ParB-like partition nuclease DNA, RNA and nucleotide metabolism 1 12628 12912
YP_529843.1 NC_007924_p8 recombination protein phrog_15265 recombinase other 1 3945 4097
YP_529896.1 NC_007924_p61 lysin phrog_291 endolysin lysis 1 36762 37502
YP_529876.1 NC_007924_p41 hypothetical protein phrog_615 head-tail adaptor connector 1 21272 21634
YP_529866.1 NC_007924_p31 hypothetical protein phrog_1305 DNA binding protein DNA, RNA and nucleotide metabolism 1 13353 13970
YP_529871.1 NC_007924_p36 phage portal protein phrog_64 portal protein head and packaging 1 16602 18014
YP_529888.1 NC_007924_p53 tail protein phrog_6 baseplate wedge subunit tail 1 31166 32317
YP_529858.1 NC_007924_p23 hypothetical protein phrog_20359 unknown function unknown function 1 10049 10339