Genomic map of Streptomyces phage mu1/6 (NC_007967)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_007967
Definition
Streptomyces phage mu1/6, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae.
DB of origin
REFSEQ
Length
38194
Host Name
Streptomyces aureofaciens
Host domain
Bacteria
Is prophage?
undef
Number of proteins
52
%GC
71.19
Number of singletons
22
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_579213.1 NC_007967_p41 hypothetical protein singleton unknown function unknown function 1 27133 27642
YP_579183.1 NC_007967_p11 hypothetical protein singleton unknown function unknown function 1 7301 7741
YP_579221.1 NC_007967_p49 hypothetical protein phrog_9849 unknown function unknown function 1 35562 36365
YP_579218.1 NC_007967_p46 hypothetical protein phrog_33 distal tail protein Dit tail 1 32404 33252
YP_579223.1 NC_007967_p51 holin singleton unknown function unknown function 1 37656 37922
YP_579202.1 NC_007967_p30 hypothetical protein singleton unknown function unknown function 1 17695 18474
YP_579176.1 NC_007967_p4 transcriptional regulator phrog_3 transcriptional repressor transcription regulation -1 3067 3348
YP_579215.1 NC_007967_p43 hypothetical protein singleton unknown function unknown function 1 28257 28712
YP_579181.1 NC_007967_p9 hypothetical protein phrog_66 excisionase and transcriptional regulator integration and excision 1 6534 6779
YP_579194.1 NC_007967_p22 hypothetical protein phrog_722 unknown function unknown function 1 14435 15232
YP_579179.1 NC_007967_p7 transcriptional regulator phrog_8 transcriptional regulator transcription regulation -1 5680 6000
YP_579207.1 NC_007967_p35 prohead protease phrog_80 head maturation protease head and packaging 1 22914 23783
YP_579220.1 NC_007967_p48 hypothetical protein phrog_1885 minor tail protein tail 1 34376 35560
YP_579208.1 NC_007967_p36 major capsid protein phrog_10 major head protein head and packaging 1 23940 25199
YP_579219.1 NC_007967_p47 hypothetical protein phrog_17342 unknown function unknown function 1 33264 34376
YP_579197.1 NC_007967_p25 hypothetical protein singleton unknown function unknown function 1 15913 16305
YP_579193.1 NC_007967_p21 DNA helicase phrog_19 DnaB-like replicative helicase DNA, RNA and nucleotide metabolism 1 12693 14438
YP_579174.1 NC_007967_p2 transcriptional regulator singleton unknown function unknown function -1 899 1750
YP_579206.1 NC_007967_p34 hypothetical protein singleton unknown function unknown function 1 22567 22917
YP_579212.1 NC_007967_p40 hypothetical protein singleton unknown function unknown function 1 26693 27133
YP_579211.1 NC_007967_p39 tail component protein phrog_5 tail completion or Neck1 protein connector 1 26265 26693
YP_579216.1 NC_007967_p44 hypothetical protein singleton unknown function unknown function 1 28763 28912
YP_579192.1 NC_007967_p20 hypothetical protein singleton unknown function unknown function 1 12428 12685
YP_579177.1 NC_007967_p5 integrase phrog_1 integrase integration and excision -1 4016 5266
YP_579184.1 NC_007967_p12 hypothetical protein singleton unknown function unknown function 1 7741 8043
YP_579180.1 NC_007967_p8 hypothetical protein phrog_14639 cro-like repressor transcription regulation 1 6205 6537
YP_579201.1 NC_007967_p29 transcriptional factor WhiB-like phrog_12112 transcriptional regulator WhiB-like transcription regulation 1 17056 17571
YP_579191.1 NC_007967_p19 hypothetical protein phrog_15058 unknown function unknown function 1 12075 12428
YP_579205.1 NC_007967_p33 portal protein phrog_2662 portal protein head and packaging 1 20395 22566
YP_579203.1 NC_007967_p31 hypothetical protein phrog_645 Rnase E DNA, RNA and nucleotide metabolism 1 18535 18948
YP_579217.1 NC_007967_p45 minor tail protein phrog_305 tail length tape measure protein tail 1 28919 32404
YP_579182.1 NC_007967_p10 hypothetical protein singleton unknown function unknown function 1 6868 7197
YP_579224.1 NC_007967_p52 hypothetical protein phrog_9869 unknown function unknown function 1 37919 38194
YP_579200.1 NC_007967_p28 hypothetical protein singleton unknown function unknown function 1 16797 17024
YP_579199.1 NC_007967_p27 hypothetical protein singleton unknown function unknown function 1 16633 16800
YP_579189.1 NC_007967_p17 transcriptional factor WhiB-like phrog_12112 transcriptional regulator WhiB-like transcription regulation 1 11372 11884
YP_579178.1 NC_007967_p6 hypothetical protein phrog_22170 unknown function unknown function -1 5256 5672
YP_579190.1 NC_007967_p18 hypothetical protein phrog_34544 unknown function unknown function 1 11881 12078
YP_579198.1 NC_007967_p26 hypothetical protein singleton unknown function unknown function 1 16367 16636
YP_579196.1 NC_007967_p24 hypothetical protein singleton unknown function unknown function 1 15737 15916
YP_579188.1 NC_007967_p16 hypothetical protein phrog_159 RuvC-like Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 10758 11375
YP_579186.1 NC_007967_p14 hypothetical protein phrog_16191 unknown function unknown function 1 8957 10045
YP_579185.1 NC_007967_p13 hypothetical protein phrog_298 exonuclease DNA, RNA and nucleotide metabolism 1 8040 8957
YP_579204.1 NC_007967_p32 terminase large subunit phrog_2 terminase large subunit head and packaging 1 18945 20291
YP_579173.1 NC_007967_p1 hypothetical protein singleton unknown function unknown function -1 325 885
YP_579175.1 NC_007967_p3 hypothetical protein singleton unknown function unknown function -1 1823 2071
YP_579195.1 NC_007967_p23 hypothetical protein singleton unknown function unknown function 1 15356 15697
YP_579187.1 NC_007967_p15 DNA polymerase III phrog_192 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 10042 10758
YP_579209.1 NC_007967_p37 hypothetical protein singleton unknown function unknown function 1 25272 25580
YP_579214.1 NC_007967_p42 hypothetical protein phrog_4971 major tail protein tail 1 27642 28211
YP_579222.1 NC_007967_p50 endolysin phrog_17214 endolysin lysis 1 36463 37644
YP_579210.1 NC_007967_p38 hypothetical protein singleton unknown function unknown function 1 25582 26265