| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_007967 |
Definition |
Streptomyces phage mu1/6, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae. |
DB of origin |
REFSEQ |
Length |
38194 |
Host Name |
Streptomyces aureofaciens |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
52 |
%GC |
71.19 |
Number of singletons |
22 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_579213.1 | NC_007967_p41 | hypothetical protein | singleton | unknown function | unknown function | 1 | 27133 | 27642 |
| YP_579183.1 | NC_007967_p11 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7301 | 7741 |
| YP_579221.1 | NC_007967_p49 | hypothetical protein | phrog_9849 | unknown function | unknown function | 1 | 35562 | 36365 |
| YP_579218.1 | NC_007967_p46 | hypothetical protein | phrog_33 | distal tail protein Dit | tail | 1 | 32404 | 33252 |
| YP_579223.1 | NC_007967_p51 | holin | singleton | unknown function | unknown function | 1 | 37656 | 37922 |
| YP_579202.1 | NC_007967_p30 | hypothetical protein | singleton | unknown function | unknown function | 1 | 17695 | 18474 |
| YP_579176.1 | NC_007967_p4 | transcriptional regulator | phrog_3 | transcriptional repressor | transcription regulation | -1 | 3067 | 3348 |
| YP_579215.1 | NC_007967_p43 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28257 | 28712 |
| YP_579181.1 | NC_007967_p9 | hypothetical protein | phrog_66 | excisionase and transcriptional regulator | integration and excision | 1 | 6534 | 6779 |
| YP_579194.1 | NC_007967_p22 | hypothetical protein | phrog_722 | unknown function | unknown function | 1 | 14435 | 15232 |
| YP_579179.1 | NC_007967_p7 | transcriptional regulator | phrog_8 | transcriptional regulator | transcription regulation | -1 | 5680 | 6000 |
| YP_579207.1 | NC_007967_p35 | prohead protease | phrog_80 | head maturation protease | head and packaging | 1 | 22914 | 23783 |
| YP_579220.1 | NC_007967_p48 | hypothetical protein | phrog_1885 | minor tail protein | tail | 1 | 34376 | 35560 |
| YP_579208.1 | NC_007967_p36 | major capsid protein | phrog_10 | major head protein | head and packaging | 1 | 23940 | 25199 |
| YP_579219.1 | NC_007967_p47 | hypothetical protein | phrog_17342 | unknown function | unknown function | 1 | 33264 | 34376 |
| YP_579197.1 | NC_007967_p25 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15913 | 16305 |
| YP_579193.1 | NC_007967_p21 | DNA helicase | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 12693 | 14438 |
| YP_579174.1 | NC_007967_p2 | transcriptional regulator | singleton | unknown function | unknown function | -1 | 899 | 1750 |
| YP_579206.1 | NC_007967_p34 | hypothetical protein | singleton | unknown function | unknown function | 1 | 22567 | 22917 |
| YP_579212.1 | NC_007967_p40 | hypothetical protein | singleton | unknown function | unknown function | 1 | 26693 | 27133 |
| YP_579211.1 | NC_007967_p39 | tail component protein | phrog_5 | tail completion or Neck1 protein | connector | 1 | 26265 | 26693 |
| YP_579216.1 | NC_007967_p44 | hypothetical protein | singleton | unknown function | unknown function | 1 | 28763 | 28912 |
| YP_579192.1 | NC_007967_p20 | hypothetical protein | singleton | unknown function | unknown function | 1 | 12428 | 12685 |
| YP_579177.1 | NC_007967_p5 | integrase | phrog_1 | integrase | integration and excision | -1 | 4016 | 5266 |
| YP_579184.1 | NC_007967_p12 | hypothetical protein | singleton | unknown function | unknown function | 1 | 7741 | 8043 |
| YP_579180.1 | NC_007967_p8 | hypothetical protein | phrog_14639 | cro-like repressor | transcription regulation | 1 | 6205 | 6537 |
| YP_579201.1 | NC_007967_p29 | transcriptional factor WhiB-like | phrog_12112 | transcriptional regulator WhiB-like | transcription regulation | 1 | 17056 | 17571 |
| YP_579191.1 | NC_007967_p19 | hypothetical protein | phrog_15058 | unknown function | unknown function | 1 | 12075 | 12428 |
| YP_579205.1 | NC_007967_p33 | portal protein | phrog_2662 | portal protein | head and packaging | 1 | 20395 | 22566 |
| YP_579203.1 | NC_007967_p31 | hypothetical protein | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 18535 | 18948 |
| YP_579217.1 | NC_007967_p45 | minor tail protein | phrog_305 | tail length tape measure protein | tail | 1 | 28919 | 32404 |
| YP_579182.1 | NC_007967_p10 | hypothetical protein | singleton | unknown function | unknown function | 1 | 6868 | 7197 |
| YP_579224.1 | NC_007967_p52 | hypothetical protein | phrog_9869 | unknown function | unknown function | 1 | 37919 | 38194 |
| YP_579200.1 | NC_007967_p28 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16797 | 17024 |
| YP_579199.1 | NC_007967_p27 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16633 | 16800 |
| YP_579189.1 | NC_007967_p17 | transcriptional factor WhiB-like | phrog_12112 | transcriptional regulator WhiB-like | transcription regulation | 1 | 11372 | 11884 |
| YP_579178.1 | NC_007967_p6 | hypothetical protein | phrog_22170 | unknown function | unknown function | -1 | 5256 | 5672 |
| YP_579190.1 | NC_007967_p18 | hypothetical protein | phrog_34544 | unknown function | unknown function | 1 | 11881 | 12078 |
| YP_579198.1 | NC_007967_p26 | hypothetical protein | singleton | unknown function | unknown function | 1 | 16367 | 16636 |
| YP_579196.1 | NC_007967_p24 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15737 | 15916 |
| YP_579188.1 | NC_007967_p16 | hypothetical protein | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 10758 | 11375 |
| YP_579186.1 | NC_007967_p14 | hypothetical protein | phrog_16191 | unknown function | unknown function | 1 | 8957 | 10045 |
| YP_579185.1 | NC_007967_p13 | hypothetical protein | phrog_298 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 8040 | 8957 |
| YP_579204.1 | NC_007967_p32 | terminase large subunit | phrog_2 | terminase large subunit | head and packaging | 1 | 18945 | 20291 |
| YP_579173.1 | NC_007967_p1 | hypothetical protein | singleton | unknown function | unknown function | -1 | 325 | 885 |
| YP_579175.1 | NC_007967_p3 | hypothetical protein | singleton | unknown function | unknown function | -1 | 1823 | 2071 |
| YP_579195.1 | NC_007967_p23 | hypothetical protein | singleton | unknown function | unknown function | 1 | 15356 | 15697 |
| YP_579187.1 | NC_007967_p15 | DNA polymerase III | phrog_192 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 10042 | 10758 |
| YP_579209.1 | NC_007967_p37 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25272 | 25580 |
| YP_579214.1 | NC_007967_p42 | hypothetical protein | phrog_4971 | major tail protein | tail | 1 | 27642 | 28211 |
| YP_579222.1 | NC_007967_p50 | endolysin | phrog_17214 | endolysin | lysis | 1 | 36463 | 37644 |
| YP_579210.1 | NC_007967_p38 | hypothetical protein | singleton | unknown function | unknown function | 1 | 25582 | 26265 |