| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_008194 |
Definition |
Mycobacterium phage 244, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Kostyavirus. |
DB of origin |
REFSEQ |
Length |
74483 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
142 |
%GC |
62.93 |
Number of singletons |
2 |
Number of paralogs |
4 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_654830.1 | NC_008194_p75 | hypothetical protein | phrog_1622 | unknown function | unknown function | 1 | 47793 | 47966 |
| YP_654892.1 | NC_008194_p137 | hypothetical protein | phrog_3174 | unknown function | unknown function | -1 | 72149 | 72532 |
| YP_654859.1 | NC_008194_p104 | hypothetical protein | phrog_2757 | unknown function | unknown function | 1 | 60929 | 61219 |
| YP_654775.1 | NC_008194_p20 | hypothetical protein | phrog_5711 | head fiber protein | head and packaging | 1 | 11637 | 12110 |
| YP_654835.1 | NC_008194_p80 | hypothetical protein | phrog_1882 | unknown function | unknown function | 1 | 49149 | 49799 |
| YP_654878.1 | NC_008194_p123 | hypothetical protein | phrog_2296 | unknown function | unknown function | 1 | 67757 | 67894 |
| YP_654764.1 | NC_008194_p9 | hypothetical protein | phrog_9 | terminase large subunit | head and packaging | 1 | 2277 | 3947 |
| YP_654799.1 | NC_008194_p44 | hypothetical protein | phrog_647 | unknown function | unknown function | -1 | 34707 | 35171 |
| YP_654865.1 | NC_008194_p110 | hypothetical protein | phrog_1492 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 62827 | 63327 |
| YP_654772.1 | NC_008194_p17 | hypothetical protein | phrog_2805 | minor tail protein | tail | 1 | 9814 | 10194 |
| YP_654805.1 | NC_008194_p50 | hypothetical protein | phrog_2815 | unknown function | unknown function | -1 | 36330 | 36476 |
| YP_654791.1 | NC_008194_p36 | hypothetical protein | phrog_2424 | unknown function | unknown function | 1 | 31803 | 32141 |
| YP_654778.1 | NC_008194_p23 | hypothetical protein | phrog_307 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 13095 | 13610 |
| YP_654804.1 | NC_008194_p49 | hypothetical protein | phrog_2702 | unknown function | unknown function | -1 | 36096 | 36311 |
| YP_654895.1 | NC_008194_p140 | hypothetical protein | phrog_2795 | unknown function | unknown function | -1 | 72949 | 73233 |
| YP_654841.1 | NC_008194_p86 | hypothetical protein | phrog_9963 | unknown function | unknown function | 1 | 52017 | 52343 |
| YP_654874.1 | NC_008194_p119 | hypothetical protein | phrog_3062 | unknown function | unknown function | 1 | 66748 | 67002 |
| YP_654790.1 | NC_008194_p35 | hypothetical protein | phrog_526 | holin | lysis | 1 | 31427 | 31810 |
| YP_654894.1 | NC_008194_p139 | hypothetical protein | phrog_2772 | unknown function | unknown function | -1 | 72707 | 72952 |
| YP_654823.1 | NC_008194_p68 | hypothetical protein | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | 1 | 44193 | 45161 |
| YP_654827.1 | NC_008194_p72 | hypothetical protein | phrog_2771 | unknown function | unknown function | 1 | 46587 | 47057 |
| YP_654807.1 | NC_008194_p52 | hypothetical protein | phrog_2847 | unknown function | unknown function | -1 | 37158 | 37460 |
| YP_654767.1 | NC_008194_p12 | hypothetical protein | phrog_2753 | head maturation protease | head and packaging | 1 | 5726 | 7018 |
| YP_654776.1 | NC_008194_p21 | hypothetical protein | phrog_621 | tail assembly chaperone | tail | 1 | 12231 | 12692 |
| YP_654883.1 | NC_008194_p128 | hypothetical protein | phrog_2579 | ParB C-terminal domain | DNA, RNA and nucleotide metabolism | -1 | 68985 | 69374 |
| YP_654846.1 | NC_008194_p91 | hypothetical protein | phrog_2844 | unknown function | unknown function | 1 | 54132 | 54263 |
| YP_654789.1 | NC_008194_p34 | hypothetical protein | phrog_317 | endolysin | lysis | 1 | 29921 | 31423 |
| YP_654784.1 | NC_008194_p29 | hypothetical protein | phrog_382 | minor tail protein with lysin activity | tail | 1 | 24957 | 27797 |
| YP_654774.1 | NC_008194_p19 | hypothetical protein | phrog_476 | major tail protein | tail | 1 | 10603 | 11577 |
| YP_654855.1 | NC_008194_p100 | hypothetical protein | phrog_1035 | endonuclease VII | DNA, RNA and nucleotide metabolism | 1 | 58683 | 59246 |
| YP_654796.1 | NC_008194_p41 | hypothetical protein | phrog_9947 | Lsr2-like DNA bridging protein | DNA, RNA and nucleotide metabolism | -1 | 33897 | 34076 |
| YP_654850.1 | NC_008194_p95 | hypothetical protein | phrog_2853 | unknown function | unknown function | 1 | 56718 | 56876 |
| YP_654844.1 | NC_008194_p89 | 5'-hydroxyl kinase, a 3'-phosphatase and a 2',3'-cyclic phosphodiesterase | phrog_505 | polynucleotide kinase | other | 1 | 53048 | 53989 |
| YP_654808.1 | NC_008194_p53 | hypothetical protein | phrog_1 | integrase | integration and excision | 1 | 37711 | 38592 |
| YP_654888.1 | NC_008194_p133 | hypothetical protein | phrog_4547 | unknown function | unknown function | -1 | 70919 | 71236 |
| YP_654877.1 | NC_008194_p122 | hypothetical protein | phrog_2823 | unknown function | unknown function | 1 | 67560 | 67760 |
| YP_654757.1 | NC_008194_p2 | hypothetical protein | phrog_2829 | unknown function | unknown function | 1 | 267 | 560 |
| YP_654821.1 | NC_008194_p66 | hypothetical protein | phrog_301 | secreted protein | other | 1 | 43538 | 43870 |
| YP_654885.1 | NC_008194_p130 | hypothetical protein | phrog_3034 | unknown function | unknown function | -1 | 69750 | 70118 |
| YP_654872.1 | NC_008194_p117 | hypothetical protein | phrog_2755 | unknown function | unknown function | 1 | 66389 | 66562 |
| YP_654814.1 | NC_008194_p59 | hypothetical protein | phrog_923 | unknown function | unknown function | 1 | 40703 | 41548 |
| YP_654779.1 | NC_008194_p24 | hypothetical protein | phrog_2723 | tail length tape measure protein | tail | 1 | 13611 | 18347 |
| YP_654829.1 | NC_008194_p74 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 47428 | 47793 |
| YP_654887.1 | NC_008194_p132 | hypothetical protein | phrog_1587 | unknown function | unknown function | -1 | 70588 | 70917 |
| YP_654875.1 | NC_008194_p120 | hypothetical protein | phrog_2174 | unknown function | unknown function | 1 | 66999 | 67412 |
| YP_654793.1 | NC_008194_p38 | hypothetical protein | phrog_726 | unknown function | unknown function | 1 | 32992 | 33408 |
| YP_654848.1 | NC_008194_p93 | hypothetical protein | phrog_1590 | unknown function | unknown function | 1 | 55622 | 56443 |
| YP_654803.1 | NC_008194_p48 | hypothetical protein | phrog_2893 | unknown function | unknown function | -1 | 35867 | 36103 |
| YP_654852.1 | NC_008194_p97 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 57329 | 57772 |
| YP_654781.1 | NC_008194_p26 | hypothetical protein | phrog_110 | minor tail protein | tail | 1 | 20026 | 21705 |
| YP_654868.1 | NC_008194_p113 | hypothetical protein | phrog_403 | DNA polymerase exonuclease subunit | DNA, RNA and nucleotide metabolism | 1 | 64274 | 65059 |
| YP_654896.1 | NC_008194_p141 | hypothetical protein | phrog_2904 | unknown function | unknown function | 1 | 73269 | 73616 |
| YP_654785.1 | NC_008194_p30 | hypothetical protein | phrog_553 | minor tail protein | tail | 1 | 27798 | 28760 |
| YP_654833.1 | NC_008194_p78 | hypothetical protein | phrog_740 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 48609 | 48926 |
| YP_654839.1 | NC_008194_p84 | hypothetical protein | phrog_1821 | transcriptional regulator WhiB-like | transcription regulation | 1 | 51568 | 51828 |
| YP_654845.1 | NC_008194_p90 | hypothetical protein | singleton | unknown function | unknown function | 1 | 53989 | 54168 |
| YP_654840.1 | NC_008194_p85 | hypothetical protein | phrog_2747 | unknown function | unknown function | 1 | 51803 | 52024 |
| YP_654788.1 | NC_008194_p33 | hypothetical protein | phrog_411 | unknown function | unknown function | 1 | 29563 | 29847 |
| YP_654794.1 | NC_008194_p39 | hypothetical protein | phrog_22 | thioredoxin domain | DNA, RNA and nucleotide metabolism | 1 | 33415 | 33660 |
| YP_654810.1 | NC_008194_p55 | hypothetical protein | phrog_950 | unknown function | unknown function | -1 | 38948 | 39721 |
| YP_654812.1 | NC_008194_p57 | hypothetical protein | phrog_3071 | unknown function | unknown function | 1 | 40474 | 40572 |
| YP_654765.1 | NC_008194_p10 | hypothetical protein | phrog_2845 | unknown function | unknown function | 1 | 3959 | 4180 |
| YP_654886.1 | NC_008194_p131 | hypothetical protein | phrog_1915 | unknown function | unknown function | -1 | 70115 | 70573 |
| YP_654869.1 | NC_008194_p114 | hypothetical protein | phrog_1941 | unknown function | unknown function | 1 | 65056 | 65298 |
| YP_654761.1 | NC_008194_p6 | hypothetical protein | phrog_83 | terminase small subunit | head and packaging | 1 | 1149 | 1610 |
| YP_654801.1 | NC_008194_p46 | hypothetical protein | phrog_1155 | unknown function | unknown function | -1 | 35530 | 35703 |
| YP_654756.1 | NC_008194_p1 | hypothetical protein | phrog_3456 | unknown function | unknown function | 1 | 34 | 270 |
| YP_654832.1 | NC_008194_p77 | hypothetical protein | phrog_289 | GTP-binding domain | other | 1 | 48199 | 48612 |
| YP_654762.1 | NC_008194_p7 | hypothetical protein | phrog_4101 | unknown function | unknown function | -1 | 1682 | 1924 |
| YP_654861.1 | NC_008194_p106 | hypothetical protein | phrog_959 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 61588 | 61878 |
| YP_654862.1 | NC_008194_p107 | hypothetical protein | phrog_19288 | unknown function | unknown function | 1 | 61889 | 62002 |
| YP_654834.1 | NC_008194_p79 | hypothetical protein | singleton | unknown function | unknown function | 1 | 48745 | 49152 |
| YP_654822.1 | NC_008194_p67 | hypothetical protein | phrog_762 | unknown function | unknown function | 1 | 43867 | 44196 |
| YP_654857.1 | NC_008194_p102 | hypothetical protein | phrog_94 | head maturation protease | head and packaging | 1 | 59715 | 60575 |
| YP_654783.1 | NC_008194_p28 | hypothetical protein | phrog_346 | minor tail protein | tail | 1 | 22564 | 24960 |
| YP_654809.1 | NC_008194_p54 | hypothetical protein | phrog_2842 | unknown function | unknown function | 1 | 38731 | 38970 |
| YP_654867.1 | NC_008194_p112 | hypothetical protein | phrog_801 | dATP / dGTP pyrophosphohydrolase | DNA, RNA and nucleotide metabolism | 1 | 63670 | 64263 |
| YP_654820.1 | NC_008194_p65 | hypothetical protein | phrog_2221 | unknown function | unknown function | 1 | 43187 | 43348 |
| YP_654893.1 | NC_008194_p138 | hypothetical protein | phrog_1438 | unknown function | unknown function | -1 | 72537 | 72710 |
| YP_654819.1 | NC_008194_p64 | hypothetical protein | phrog_2147 | unknown function | unknown function | 1 | 42954 | 43187 |
| YP_654758.1 | NC_008194_p3 | hypothetical protein | phrog_2775 | unknown function | unknown function | 1 | 557 | 742 |
| YP_654816.1 | NC_008194_p61 | hypothetical protein | phrog_2800 | unknown function | unknown function | 1 | 41693 | 41971 |
| YP_654853.1 | NC_008194_p98 | hypothetical protein | phrog_2788 | unknown function | unknown function | 1 | 57774 | 58109 |
| YP_654854.1 | NC_008194_p99 | hypothetical protein | phrog_1568 | DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 58106 | 58642 |
| YP_654766.1 | NC_008194_p11 | hypothetical protein | phrog_12 | portal protein | head and packaging | 1 | 4167 | 5723 |
| YP_654871.1 | NC_008194_p116 | hypothetical protein | phrog_2965 | unknown function | unknown function | 1 | 66265 | 66402 |
| YP_654881.1 | NC_008194_p126 | hypothetical protein | phrog_3016 | unknown function | unknown function | 1 | 68185 | 68346 |
| YP_654836.1 | NC_008194_p81 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 49796 | 50131 |
| YP_654891.1 | NC_008194_p136 | hypothetical protein | phrog_2883 | unknown function | unknown function | -1 | 71609 | 72145 |
| YP_654787.1 | NC_008194_p32 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 29245 | 29430 |
| YP_654780.1 | NC_008194_p25 | hypothetical protein | phrog_106 | minor tail protein | tail | 1 | 18377 | 20038 |
| YP_654863.1 | NC_008194_p108 | hypothetical protein | phrog_2846 | unknown function | unknown function | 1 | 62260 | 62556 |
| YP_654842.1 | NC_008194_p87 | hypothetical protein | phrog_244 | RusA-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 52340 | 52702 |
| YP_654849.1 | NC_008194_p94 | hypothetical protein | phrog_472 | WhiB transcriptional factor | transcription regulation | 1 | 56440 | 56700 |
| YP_654866.1 | NC_008194_p111 | hypothetical protein | phrog_355 | nucleoside 2-deoxyribosyltransferase | DNA, RNA and nucleotide metabolism | 1 | 63341 | 63673 |
| YP_654773.1 | NC_008194_p18 | hypothetical protein | phrog_813 | head-tail adaptor | connector | 1 | 10172 | 10576 |
| YP_654798.1 | NC_008194_p43 | hypothetical protein | phrog_3481 | unknown function | unknown function | -1 | 34513 | 34710 |
| YP_654759.1 | NC_008194_p4 | hypothetical protein | phrog_3858 | unknown function | unknown function | 1 | 739 | 1029 |
| YP_654760.1 | NC_008194_p5 | hypothetical protein | phrog_8426 | unknown function | unknown function | 1 | 1007 | 1156 |
| YP_654817.1 | NC_008194_p62 | hypothetical protein | phrog_2744 | unknown function | unknown function | 1 | 42515 | 42820 |
| YP_654828.1 | NC_008194_p73 | hypothetical protein | phrog_1389 | unknown function | unknown function | 1 | 47057 | 47425 |
| YP_654847.1 | NC_008194_p92 | hypothetical protein | phrog_968 | RNA ligase | DNA, RNA and nucleotide metabolism | 1 | 54260 | 55585 |
| YP_654763.1 | NC_008194_p8 | hypothetical protein | phrog_2202 | unknown function | unknown function | -1 | 1924 | 2232 |
| YP_654882.1 | NC_008194_p127 | hypothetical protein | phrog_686 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 68725 | 68988 |
| YP_654851.1 | NC_008194_p96 | hypothetical protein | phrog_889 | unknown function | unknown function | 1 | 56873 | 57325 |
| YP_654792.1 | NC_008194_p37 | hypothetical protein | phrog_102 | endolysin | lysis | 1 | 32138 | 32995 |
| YP_654771.1 | NC_008194_p16 | hypothetical protein | phrog_1531 | head closure | connector | 1 | 9482 | 9817 |
| YP_654818.1 | NC_008194_p63 | hypothetical protein | phrog_3463 | unknown function | unknown function | 1 | 42839 | 42946 |
| YP_654879.1 | NC_008194_p124 | hypothetical protein | phrog_2925 | unknown function | unknown function | 1 | 67891 | 68070 |
| YP_654880.1 | NC_008194_p125 | hypothetical protein | phrog_2897 | unknown function | unknown function | 1 | 68070 | 68201 |
| YP_654811.1 | NC_008194_p56 | hypothetical protein | phrog_2745 | transcriptional repressor | transcription regulation | -1 | 39816 | 40247 |
| YP_654806.1 | NC_008194_p51 | hypothetical protein | phrog_2759 | unknown function | unknown function | -1 | 36476 | 36871 |
| YP_654864.1 | NC_008194_p109 | hypothetical protein | phrog_1042 | unknown function | unknown function | 1 | 62553 | 62816 |
| YP_654797.1 | NC_008194_p42 | hypothetical protein | phrog_1223 | nucloid associated Lsr2-like | DNA, RNA and nucleotide metabolism | -1 | 34079 | 34465 |
| YP_654815.1 | NC_008194_p60 | hypothetical protein | phrog_2463 | unknown function | unknown function | 1 | 41550 | 41696 |
| YP_654858.1 | NC_008194_p103 | hypothetical protein | phrog_2785 | unknown function | unknown function | 1 | 60572 | 60928 |
| YP_654813.1 | NC_008194_p58 | hypothetical protein | phrog_2852 | unknown function | unknown function | 1 | 40569 | 40706 |
| YP_654800.1 | NC_008194_p45 | hypothetical protein | phrog_722 | unknown function | unknown function | -1 | 35168 | 35533 |
| YP_654889.1 | NC_008194_p134 | hypothetical protein | phrog_3730 | unknown function | unknown function | -1 | 71242 | 71352 |
| YP_654876.1 | NC_008194_p121 | hypothetical protein | phrog_2764 | unknown function | unknown function | 1 | 67409 | 67576 |
| YP_654825.1 | NC_008194_p70 | hypothetical protein | phrog_155 | Erf-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | 1 | 45561 | 46283 |
| YP_654777.1 | NC_008194_p22 | hypothetical protein | phrog_5940 | tail assembly chaperone | tail | 1 | 12824 | 13105 |
| YP_654782.1 | NC_008194_p27 | hypothetical protein | phrog_732 | minor tail protein | tail | 1 | 21393 | 22547 |
| YP_654770.1 | NC_008194_p15 | hypothetical protein | phrog_442 | head-tail adaptor | connector | 1 | 8901 | 9467 |
| YP_654856.1 | NC_008194_p101 | hypothetical protein | phrog_44 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | 1 | 59239 | 59679 |
| YP_654884.1 | NC_008194_p129 | hypothetical protein | phrog_2942 | unknown function | unknown function | -1 | 69493 | 69753 |
| YP_654843.1 | NC_008194_p88 | hypothetical protein | phrog_2894 | unknown function | unknown function | 1 | 52699 | 52893 |
| YP_654837.1 | NC_008194_p82 | hypothetical protein | phrog_19 | DnaB-like replicative helicase | DNA, RNA and nucleotide metabolism | 1 | 50124 | 51386 |
| YP_654890.1 | NC_008194_p135 | hypothetical protein | phrog_2287 | unknown function | unknown function | -1 | 71357 | 71593 |
| YP_654873.1 | NC_008194_p118 | hypothetical protein | phrog_2279 | unknown function | unknown function | 1 | 66555 | 66767 |
| YP_654897.1 | NC_008194_p142 | hypothetical protein | phrog_2762 | unknown function | unknown function | 1 | 73691 | 73912 |
| YP_654838.1 | NC_008194_p83 | hypothetical protein | phrog_1091 | unknown function | unknown function | 1 | 51383 | 51571 |
| YP_654826.1 | NC_008194_p71 | hypothetical protein | phrog_2750 | unknown function | unknown function | 1 | 46276 | 46587 |
| YP_654802.1 | NC_008194_p47 | hypothetical protein | phrog_861 | site-specific recombination directionality factor RDF | integration and excision | -1 | 35703 | 35870 |
| YP_654824.1 | NC_008194_p69 | hypothetical protein | phrog_572 | unknown function | unknown function | 1 | 45158 | 45568 |
| YP_654795.1 | NC_008194_p40 | hypothetical protein | phrog_27547 | unknown function | unknown function | -1 | 33700 | 33819 |
| YP_654769.1 | NC_008194_p14 | hypothetical protein | phrog_2796 | head-tail connector protein | connector | 1 | 8722 | 8901 |
| YP_654786.1 | NC_008194_p31 | hypothetical protein | phrog_644 | unknown function | unknown function | 1 | 28830 | 29258 |
| YP_654870.1 | NC_008194_p115 | hypothetical protein | phrog_97 | UvsX-like recombinase | other | 1 | 65306 | 66268 |
| YP_654860.1 | NC_008194_p105 | hypothetical protein | phrog_1969 | unknown function | unknown function | 1 | 61224 | 61535 |
| YP_654831.1 | NC_008194_p76 | hypothetical protein | phrog_2793 | unknown function | unknown function | 1 | 47969 | 48202 |
| YP_654768.1 | NC_008194_p13 | hypothetical protein | phrog_10 | major head protein | head and packaging | 1 | 7106 | 8599 |