Genomic map of Mycobacterium phage PBI1 (NC_008198)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008198
Definition
Mycobacterium phage PBI1, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Dclasvirinae; Plotvirus; Mycobacterium virus PBI1.
DB of origin
REFSEQ
Length
64494
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
81
%GC
59.71
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_655205.1 NC_008198_p9 protein of an unannotated phage phrog_64 portal protein head and packaging 1 6328 7911
YP_655211.1 NC_008198_p15 protein of an unannotated phage phrog_4866 head scaffolding protein head and packaging 1 9660 10367
YP_655255.1 NC_008198_p59 protein of an unannotated phage phrog_415 polynucleotide kinase other 1 47232 47849
YP_655207.1 NC_008198_p11 protein of an unannotated phage phrog_5556 tail protein tail 1 8125 8577
YP_655234.1 NC_008198_p38 protein of an unannotated phage phrog_726 unknown function unknown function 1 32229 32684
YP_655213.1 NC_008198_p17 protein of an unannotated phage phrog_3990 major head protein head and packaging 1 10812 12023
YP_655252.1 NC_008198_p56 protein of an unannotated phage phrog_124 Sak4-like ssDNA annealing protein DNA, RNA and nucleotide metabolism 1 44420 45280
YP_655218.1 NC_008198_p22 protein of an unannotated phage phrog_4995 unknown function unknown function 1 13479 13898
YP_655266.1 NC_008198_p70 protein of an unannotated phage phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 56286 56519
YP_655261.1 NC_008198_p65 protein of an unannotated phage phrog_85 thymidylate synthase DNA, RNA and nucleotide metabolism 1 53534 54634
YP_655222.1 NC_008198_p26 protein of an unannotated phage singleton unknown function unknown function 1 16141 16311
YP_655249.1 NC_008198_p53 protein of an unannotated phage phrog_549 unknown function unknown function 1 42653 43033
YP_655223.1 NC_008198_p27 protein of an unannotated phage phrog_6435 tail length tape measure protein tail 1 16313 21085
YP_655274.1 NC_008198_p78 protein of an unannotated phage phrog_10449 unknown function unknown function 1 59055 59357
YP_655244.1 NC_008198_p48 protein of an unannotated phage phrog_11197 unknown function unknown function 1 39145 39384
YP_655248.1 NC_008198_p52 protein of an unannotated phage phrog_10024 unknown function unknown function 1 41984 42472
YP_655262.1 NC_008198_p66 protein of an unannotated phage phrog_1981 unknown function unknown function 1 54941 55459
YP_655236.1 NC_008198_p40 protein of an unannotated phage phrog_11465 unknown function unknown function 1 33955 34536
YP_655220.1 NC_008198_p24 protein of an unannotated phage phrog_4971 major tail protein tail 1 14493 15335
YP_655233.1 NC_008198_p37 protein of an unannotated phage phrog_8515 unknown function unknown function 1 31580 32245
YP_655208.1 NC_008198_p12 protein of an unannotated phage phrog_2864 unknown function unknown function 1 8546 8725
YP_655276.1 NC_008198_p80 protein of an unannotated phage phrog_10882 unknown function unknown function 1 60617 60928
YP_655227.1 NC_008198_p31 protein of an unannotated phage phrog_382 minor tail protein with lysin activity tail 1 26517 28565
YP_655250.1 NC_008198_p54 protein of an unannotated phage phrog_1218 exonuclease DNA, RNA and nucleotide metabolism 1 43038 44216
YP_655251.1 NC_008198_p55 protein of an unannotated phage phrog_8491 unknown function unknown function 1 44218 44406
YP_655241.1 NC_008198_p45 protein of an unannotated phage phrog_421 unknown function unknown function 1 37031 38140
YP_655267.1 NC_008198_p71 protein of an unannotated phage phrog_10394 unknown function unknown function 1 56578 56793
YP_655277.1 NC_008198_p81 protein of an unannotated phage phrog_1156 DNA primase DNA, RNA and nucleotide metabolism 1 61116 64067
YP_655239.1 NC_008198_p43 protein of an unannotated phage phrog_9402 unknown function unknown function 1 36408 36689
YP_655268.1 NC_008198_p72 protein of an unannotated phage phrog_658 unknown function unknown function 1 56797 57237
YP_655269.1 NC_008198_p73 protein of an unannotated phage phrog_10149 unknown function unknown function 1 57249 57824
YP_655202.1 NC_008198_p6 protein of an unannotated phage phrog_11599 unknown function unknown function 1 2136 3776
YP_655203.1 NC_008198_p7 protein of an unannotated phage phrog_15359 unknown function unknown function 1 3773 4543
YP_655275.1 NC_008198_p79 protein of an unannotated phage phrog_11488 DNA binding protein DNA, RNA and nucleotide metabolism 1 59784 60569
YP_655214.1 NC_008198_p18 protein of an unannotated phage phrog_5318 unknown function unknown function 1 12020 12388
YP_655226.1 NC_008198_p30 protein of an unannotated phage phrog_346 minor tail protein tail 1 24247 26517
YP_655230.1 NC_008198_p34 protein of an unannotated phage phrog_3758 virion structural protein head and packaging 1 29764 30192
YP_655246.1 NC_008198_p50 protein of an unannotated phage phrog_62 DNA helicase DNA, RNA and nucleotide metabolism 1 39660 41603
YP_655265.1 NC_008198_p69 protein of an unannotated phage phrog_10494 unknown function unknown function 1 56008 56283
YP_655197.1 NC_008198_p1 protein of an unannotated phage phrog_5460 unknown function unknown function 1 1 309
YP_655273.1 NC_008198_p77 protein of an unannotated phage phrog_8685 unknown function unknown function 1 58813 59058
YP_655260.1 NC_008198_p64 protein of an unannotated phage phrog_10638 unknown function unknown function 1 52985 53506
YP_655225.1 NC_008198_p29 protein of an unannotated phage phrog_1885 minor tail protein tail 1 22592 24247
YP_655200.1 NC_008198_p4 protein of an unannotated phage phrog_10761 unknown function unknown function 1 1772 1936
YP_655258.1 NC_008198_p62 protein of an unannotated phage phrog_3142 FabG-like 3-oxoacyl-(acyl-carrier-protein) reductase moron, auxiliary metabolic gene and host takeover 1 48875 49570
YP_655243.1 NC_008198_p47 protein of an unannotated phage phrog_5307 unknown function unknown function 1 38477 39067
YP_655253.1 NC_008198_p57 protein of an unannotated phage phrog_10064 unknown function unknown function 1 45281 46210
YP_655237.1 NC_008198_p41 protein of an unannotated phage phrog_636 unknown function unknown function -1 34542 35423
YP_655198.1 NC_008198_p2 protein of an unannotated phage phrog_7407 unknown function unknown function 1 421 1524
YP_655201.1 NC_008198_p5 protein of an unannotated phage phrog_12064 unknown function unknown function 1 1946 2125
YP_655219.1 NC_008198_p23 protein of an unannotated phage phrog_10150 unknown function unknown function 1 13935 14291
YP_655224.1 NC_008198_p28 protein of an unannotated phage phrog_7161 minor tail protein tail 1 21138 22595
YP_655231.1 NC_008198_p35 protein of an unannotated phage phrog_1512 endolysin lysis 1 30201 31184
YP_655259.1 NC_008198_p63 protein of an unannotated phage phrog_405 DNA polymerase DNA, RNA and nucleotide metabolism 1 49783 52983
YP_655245.1 NC_008198_p49 protein of an unannotated phage phrog_17737 unknown function unknown function 1 39442 39657
YP_655228.1 NC_008198_p32 protein of an unannotated phage phrog_553 minor tail protein tail 1 28565 29431
YP_655271.1 NC_008198_p75 protein of an unannotated phage phrog_13969 unknown function unknown function 1 58380 58505
YP_655215.1 NC_008198_p19 protein of an unannotated phage phrog_5274 unknown function unknown function 1 12391 12723
YP_655204.1 NC_008198_p8 protein of an unannotated phage phrog_2 terminase large subunit head and packaging 1 4540 6306
YP_655270.1 NC_008198_p74 protein of an unannotated phage phrog_10814 unknown function unknown function 1 57841 58380
YP_655235.1 NC_008198_p39 protein of an unannotated phage phrog_102 endolysin lysis 1 32686 33945
YP_655221.1 NC_008198_p25 protein of an unannotated phage phrog_4336 tail assembly chaperone tail 1 15417 16070
YP_655199.1 NC_008198_p3 protein of an unannotated phage phrog_10843 unknown function unknown function 1 1568 1762
YP_655240.1 NC_008198_p44 protein of an unannotated phage phrog_7969 unknown function unknown function 1 36784 37029
YP_655212.1 NC_008198_p16 protein of an unannotated phage phrog_5042 unknown function unknown function 1 10383 10802
YP_655229.1 NC_008198_p33 protein of an unannotated phage phrog_6443 unknown function unknown function 1 29474 29761
YP_655256.1 NC_008198_p60 protein of an unannotated phage phrog_6636 methyltransferase other 1 47849 48379
YP_655254.1 NC_008198_p58 protein of an unannotated phage phrog_8720 unknown function unknown function 1 46425 47228
YP_655238.1 NC_008198_p42 protein of an unannotated phage phrog_10424 unknown function unknown function -1 35737 36222
YP_655257.1 NC_008198_p61 protein of an unannotated phage phrog_10271 unknown function unknown function 1 48382 48867
YP_655232.1 NC_008198_p36 protein of an unannotated phage phrog_9801 unknown function unknown function 1 31181 31435
YP_655263.1 NC_008198_p67 protein of an unannotated phage phrog_2507 unknown function unknown function 1 55485 55661
YP_655272.1 NC_008198_p76 protein of an unannotated phage phrog_1581 unknown function unknown function 1 58502 58816
YP_655264.1 NC_008198_p68 protein of an unannotated phage phrog_10832 unknown function unknown function 1 55658 56011
YP_655206.1 NC_008198_p10 protein of an unannotated phage phrog_1375 unknown function unknown function 1 7922 8128
YP_655242.1 NC_008198_p46 protein of an unannotated phage phrog_11235 unknown function unknown function 1 38231 38413
YP_655216.1 NC_008198_p20 protein of an unannotated phage phrog_4904 unknown function unknown function 1 12720 13127
YP_655247.1 NC_008198_p51 protein of an unannotated phage phrog_10722 unknown function unknown function 1 41600 41881
YP_655217.1 NC_008198_p21 protein of an unannotated phage phrog_5 tail completion or Neck1 protein connector 1 13201 13482
YP_655209.1 NC_008198_p13 protein of an unannotated phage phrog_23863 unknown function unknown function 1 8813 9058
YP_655210.1 NC_008198_p14 protein of an unannotated phage phrog_25879 head morphogenesis head and packaging 1 8974 9627