| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_008204 |
Definition |
Mycobacterium phage Qyrzula, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Bclasvirinae; Rosebushvirus. |
DB of origin |
REFSEQ |
Length |
67188 |
Host Name |
Mycobacterium smegmatis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
81 |
%GC |
68.96 |
Number of singletons |
3 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_655702.1 | NC_008204_p22 | protein of an unannotated phage | phrog_783 | head-tail adaptor | connector | 1 | 19384 | 20001 |
| YP_655705.1 | NC_008204_p25 | protein of an unannotated phage | phrog_5 | tail completion or Neck1 protein | connector | 1 | 20920 | 21348 |
| YP_655747.1 | NC_008204_p67 | protein of an unannotated phage | phrog_7463 | unknown function | unknown function | -1 | 60183 | 60494 |
| YP_655688.1 | NC_008204_p8 | protein of an unannotated phage | phrog_5935 | unknown function | unknown function | -1 | 6011 | 6481 |
| YP_655726.1 | NC_008204_p46 | protein of an unannotated phage | phrog_870 | unknown function | unknown function | -1 | 43104 | 43601 |
| YP_655682.1 | NC_008204_p2 | protein of an unannotated phage | phrog_7068 | queuine tRNA-ribosyltransferase | moron, auxiliary metabolic gene and host takeover | 1 | 789 | 1919 |
| YP_655731.1 | NC_008204_p51 | protein of an unannotated phage | phrog_906 | DNA polymerase/primase | DNA, RNA and nucleotide metabolism | -1 | 47820 | 50570 |
| YP_655689.1 | NC_008204_p9 | protein of an unannotated phage | phrog_159 | RuvC-like Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 6447 | 7139 |
| YP_655752.1 | NC_008204_p72 | protein of an unannotated phage | phrog_1933 | unknown function | unknown function | -1 | 62151 | 62363 |
| YP_655693.1 | NC_008204_p13 | protein of an unannotated phage | phrog_859 | portal protein | head and packaging | 1 | 9707 | 12154 |
| YP_655690.1 | NC_008204_p10 | protein of an unannotated phage | phrog_7710 | unknown function | unknown function | 1 | 7136 | 7456 |
| YP_655757.1 | NC_008204_p77 | protein of an unannotated phage | phrog_2972 | unknown function | unknown function | -1 | 65004 | 65297 |
| YP_655703.1 | NC_008204_p23 | protein of an unannotated phage | phrog_810 | unknown function | unknown function | 1 | 19836 | 20558 |
| YP_655721.1 | NC_008204_p41 | protein of an unannotated phage | phrog_597 | DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39381 | 39560 |
| YP_655754.1 | NC_008204_p74 | protein of an unannotated phage | phrog_7394 | unknown function | unknown function | -1 | 62921 | 63142 |
| YP_655717.1 | NC_008204_p37 | protein of an unannotated phage | phrog_915 | unknown function | unknown function | 1 | 37564 | 37920 |
| YP_655710.1 | NC_008204_p30 | protein of an unannotated phage | phrog_346 | minor tail protein | tail | 1 | 30056 | 32776 |
| YP_655751.1 | NC_008204_p71 | protein of an unannotated phage | phrog_7479 | unknown function | unknown function | -1 | 61573 | 61980 |
| YP_655719.1 | NC_008204_p39 | protein of an unannotated phage | phrog_892 | tail fiber protein | tail | 1 | 38284 | 38688 |
| YP_655716.1 | NC_008204_p36 | protein of an unannotated phage | phrog_3329 | unknown function | unknown function | 1 | 36220 | 37533 |
| YP_655748.1 | NC_008204_p68 | protein of an unannotated phage | phrog_7367 | unknown function | unknown function | -1 | 60491 | 60802 |
| YP_655696.1 | NC_008204_p16 | protein of an unannotated phage | phrog_970 | unknown function | unknown function | 1 | 15440 | 16189 |
| YP_655723.1 | NC_008204_p43 | protein of an unannotated phage | phrog_636 | unknown function | unknown function | -1 | 40082 | 40579 |
| YP_655759.1 | NC_008204_p79 | protein of an unannotated phage | phrog_7256 | unknown function | unknown function | -1 | 65611 | 65979 |
| YP_655735.1 | NC_008204_p55 | protein of an unannotated phage | phrog_3835 | unknown function | unknown function | -1 | 53473 | 53883 |
| YP_655746.1 | NC_008204_p66 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 59908 | 60069 |
| YP_655740.1 | NC_008204_p60 | protein of an unannotated phage | phrog_645 | Rnase E | DNA, RNA and nucleotide metabolism | 1 | 56221 | 56880 |
| YP_655734.1 | NC_008204_p54 | protein of an unannotated phage | phrog_993 | unknown function | unknown function | -1 | 52985 | 53476 |
| YP_655744.1 | NC_008204_p64 | protein of an unannotated phage | phrog_20929 | unknown function | unknown function | -1 | 58402 | 58767 |
| YP_655741.1 | NC_008204_p61 | protein of an unannotated phage | phrog_1031 | unknown function | unknown function | 1 | 56891 | 57415 |
| YP_655730.1 | NC_008204_p50 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 47264 | 47596 |
| YP_655743.1 | NC_008204_p63 | protein of an unannotated phage | phrog_928 | unknown function | unknown function | 1 | 57837 | 58394 |
| YP_655698.1 | NC_008204_p18 | protein of an unannotated phage | phrog_2344 | unknown function | unknown function | 1 | 16765 | 17247 |
| YP_655706.1 | NC_008204_p26 | protein of an unannotated phage | phrog_6941 | unknown function | unknown function | 1 | 21403 | 21888 |
| YP_655733.1 | NC_008204_p53 | protein of an unannotated phage | phrog_3025 | unknown function | unknown function | -1 | 52608 | 52988 |
| YP_655715.1 | NC_008204_p35 | protein of an unannotated phage | phrog_282 | unknown function | unknown function | 1 | 35624 | 36223 |
| YP_655742.1 | NC_008204_p62 | protein of an unannotated phage | phrog_7186 | unknown function | unknown function | 1 | 57508 | 57840 |
| YP_655720.1 | NC_008204_p40 | protein of an unannotated phage | phrog_2804 | virion structural protein | head and packaging | 1 | 38689 | 39384 |
| YP_655685.1 | NC_008204_p5 | protein of an unannotated phage | phrog_2076 | QueE-like radical SAM domain | moron, auxiliary metabolic gene and host takeover | 1 | 3048 | 3761 |
| YP_655681.1 | NC_008204_p1 | protein of an unannotated phage | phrog_723 | ParB-like partition protein | DNA, RNA and nucleotide metabolism | 1 | 1 | 792 |
| YP_655700.1 | NC_008204_p20 | protein of an unannotated phage | phrog_792 | major tail protein | tail | 1 | 17666 | 18742 |
| YP_655727.1 | NC_008204_p47 | protein of an unannotated phage | phrog_466 | exonuclease | DNA, RNA and nucleotide metabolism | -1 | 43616 | 44983 |
| YP_655691.1 | NC_008204_p11 | protein of an unannotated phage | phrog_781 | unknown function | unknown function | 1 | 7453 | 7791 |
| YP_655699.1 | NC_008204_p19 | protein of an unannotated phage | phrog_2525 | unknown function | unknown function | 1 | 17244 | 17576 |
| YP_655728.1 | NC_008204_p48 | protein of an unannotated phage | phrog_16 | DNA helicase | DNA, RNA and nucleotide metabolism | -1 | 44980 | 46695 |
| YP_655725.1 | NC_008204_p45 | protein of an unannotated phage | phrog_526 | holin | lysis | 1 | 42454 | 42987 |
| YP_655755.1 | NC_008204_p75 | protein of an unannotated phage | phrog_1010 | unknown function | unknown function | -1 | 63252 | 63848 |
| YP_655722.1 | NC_008204_p42 | protein of an unannotated phage | phrog_955 | HTH DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 39618 | 39887 |
| YP_655708.1 | NC_008204_p28 | protein of an unannotated phage | phrog_838 | unknown function | unknown function | 1 | 27571 | 29007 |
| YP_655701.1 | NC_008204_p21 | protein of an unannotated phage | phrog_1318 | unknown function | unknown function | -1 | 18914 | 19105 |
| YP_655737.1 | NC_008204_p57 | protein of an unannotated phage | phrog_996 | unknown function | unknown function | 1 | 54463 | 55581 |
| YP_655683.1 | NC_008204_p3 | protein of an unannotated phage | phrog_1550 | QueC-like queuosine biosynthesis | moron, auxiliary metabolic gene and host takeover | 1 | 1916 | 2623 |
| YP_655753.1 | NC_008204_p73 | protein of an unannotated phage | phrog_6719 | unknown function | unknown function | -1 | 62360 | 62827 |
| YP_655684.1 | NC_008204_p4 | protein of an unannotated phage | phrog_2389 | QueD-like 6-pyruvoyl-tetrahydropterin synthase | moron, auxiliary metabolic gene and host takeover | 1 | 2620 | 3051 |
| YP_655749.1 | NC_008204_p69 | protein of an unannotated phage | singleton | unknown function | unknown function | -1 | 60865 | 61059 |
| YP_655761.1 | NC_008204_p81 | protein of an unannotated phage | phrog_7435 | unknown function | unknown function | -1 | 66269 | 66976 |
| YP_655711.1 | NC_008204_p31 | protein of an unannotated phage | phrog_416 | minor tail protein | tail | 1 | 32776 | 33981 |
| YP_655760.1 | NC_008204_p80 | protein of an unannotated phage | phrog_6718 | unknown function | unknown function | -1 | 65982 | 66173 |
| YP_655695.1 | NC_008204_p15 | protein of an unannotated phage | phrog_779 | unknown function | unknown function | 1 | 14622 | 15440 |
| YP_655724.1 | NC_008204_p44 | protein of an unannotated phage | phrog_317 | endolysin | lysis | 1 | 40943 | 42454 |
| YP_655732.1 | NC_008204_p52 | protein of an unannotated phage | phrog_17 | DNA polymerase | DNA, RNA and nucleotide metabolism | -1 | 50782 | 52584 |
| YP_655713.1 | NC_008204_p33 | protein of an unannotated phage | phrog_948 | unknown function | unknown function | 1 | 34400 | 34822 |
| YP_655712.1 | NC_008204_p32 | protein of an unannotated phage | phrog_240 | head protein | head and packaging | 1 | 34008 | 34391 |
| YP_655745.1 | NC_008204_p65 | protein of an unannotated phage | phrog_2089 | unknown function | unknown function | -1 | 59178 | 59423 |
| YP_655739.1 | NC_008204_p59 | protein of an unannotated phage | phrog_7544 | unknown function | unknown function | 1 | 55883 | 56224 |
| YP_655756.1 | NC_008204_p76 | protein of an unannotated phage | phrog_1221 | unknown function | unknown function | -1 | 63859 | 64899 |
| YP_655738.1 | NC_008204_p58 | protein of an unannotated phage | phrog_1016 | unknown function | unknown function | 1 | 55591 | 55851 |
| YP_655707.1 | NC_008204_p27 | protein of an unannotated phage | phrog_934 | tail length tape measure protein | tail | 1 | 21914 | 27562 |
| YP_655729.1 | NC_008204_p49 | protein of an unannotated phage | phrog_3892 | unknown function | unknown function | -1 | 46929 | 47264 |
| YP_655687.1 | NC_008204_p7 | protein of an unannotated phage | phrog_38 | terminase large subunit | head and packaging | 1 | 4314 | 6014 |
| YP_655718.1 | NC_008204_p38 | protein of an unannotated phage | phrog_941 | unknown function | unknown function | 1 | 37881 | 38246 |
| YP_655694.1 | NC_008204_p14 | protein of an unannotated phage | phrog_777 | major head protein | head and packaging | 1 | 12501 | 14528 |
| YP_655750.1 | NC_008204_p70 | protein of an unannotated phage | phrog_7525 | unknown function | unknown function | -1 | 61208 | 61516 |
| YP_655697.1 | NC_008204_p17 | protein of an unannotated phage | phrog_2272 | unknown function | unknown function | 1 | 16226 | 16768 |
| YP_655686.1 | NC_008204_p6 | protein of an unannotated phage | phrog_2197 | GTP cyclohydrolase | other | 1 | 3761 | 4336 |
| YP_655709.1 | NC_008204_p29 | protein of an unannotated phage | phrog_837 | minor tail protein | tail | 1 | 29010 | 30059 |
| YP_655714.1 | NC_008204_p34 | protein of an unannotated phage | phrog_282 | unknown function | unknown function | 1 | 34834 | 35478 |
| YP_655758.1 | NC_008204_p78 | protein of an unannotated phage | phrog_7689 | unknown function | unknown function | -1 | 65334 | 65465 |
| YP_655736.1 | NC_008204_p56 | protein of an unannotated phage | phrog_982 | unknown function | unknown function | -1 | 54204 | 54506 |
| YP_655704.1 | NC_008204_p24 | protein of an unannotated phage | phrog_901 | unknown function | unknown function | 1 | 20567 | 20920 |
| YP_655692.1 | NC_008204_p12 | protein of an unannotated phage | phrog_776 | portal protein | head and packaging | 1 | 7818 | 9707 |