Genomic map of Mycobacterium virus PMC (NC_008205)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008205
Definition
Mycobacterium phage PMC, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Cheoctovirus.
DB of origin
REFSEQ
Length
56692
Host Name
Mycobacterium smegmatis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
104
%GC
61.41
Number of singletons
1
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_655850.1 NC_008205_p89 protein of an unannotated phage phrog_10901 unknown function unknown function 1 50307 50582
YP_655782.1 NC_008205_p21 protein of an unannotated phage phrog_240 head protein head and packaging 1 22984 23325
YP_655856.1 NC_008205_p95 protein of an unannotated phage phrog_1694 unknown function unknown function 1 52210 52368
YP_655840.1 NC_008205_p79 protein of an unannotated phage phrog_722 unknown function unknown function 1 48179 48367
YP_655832.1 NC_008205_p71 protein of an unannotated phage phrog_9299 unknown function unknown function 1 46372 46464
YP_655764.1 NC_008205_p3 protein of an unannotated phage phrog_104 portal protein head and packaging 1 2255 3625
YP_655818.1 NC_008205_p57 protein of an unannotated phage phrog_664 DNA binding protein DNA, RNA and nucleotide metabolism 1 40831 41196
YP_655822.1 NC_008205_p61 protein of an unannotated phage phrog_3290 single strand annealing protein DNA, RNA and nucleotide metabolism 1 41835 42413
YP_655808.1 NC_008205_p47 protein of an unannotated phage phrog_27299 unknown function unknown function 1 36653 36877
YP_655836.1 NC_008205_p75 protein of an unannotated phage phrog_2591 unknown function unknown function 1 47353 47538
YP_655863.1 NC_008205_p102 protein of an unannotated phage phrog_3297 kinase other 1 55131 55604
YP_655854.1 NC_008205_p93 protein of an unannotated phage phrog_2474 MerR-like transcriptional regulator transcription regulation 1 51819 52043
YP_655802.1 NC_008205_p41 protein of an unannotated phage phrog_3 transcriptional repressor transcription regulation 1 34272 34484
YP_655830.1 NC_008205_p69 protein of an unannotated phage phrog_4296 unknown function unknown function 1 45796 46158
YP_655861.1 NC_008205_p100 protein of an unannotated phage phrog_1579 glycosyltransferase moron, auxiliary metabolic gene and host takeover 1 53440 54876
YP_655769.1 NC_008205_p8 protein of an unannotated phage phrog_763 head-tail adaptor connector 1 6460 6789
YP_655766.1 NC_008205_p5 protein of an unannotated phage phrog_2592 head scaffolding protein head and packaging 1 4452 5045
YP_655834.1 NC_008205_p73 protein of an unannotated phage phrog_1943 unknown function unknown function 1 46741 46935
YP_655774.1 NC_008205_p13 protein of an unannotated phage phrog_15976 tail assembly chaperone tail 1 9048 9485
YP_655768.1 NC_008205_p7 protein of an unannotated phage phrog_2377 head-tail adaptor Ad1 connector 1 5894 6463
YP_655844.1 NC_008205_p83 protein of an unannotated phage phrog_1901 unknown function unknown function 1 49171 49362
YP_655816.1 NC_008205_p55 protein of an unannotated phage phrog_2096 unknown function unknown function 1 40068 40553
YP_655786.1 NC_008205_p25 protein of an unannotated phage phrog_686 HTH DNA binding protein DNA, RNA and nucleotide metabolism -1 25080 25259
YP_655811.1 NC_008205_p50 protein of an unannotated phage phrog_1797 unknown function unknown function 1 37468 38091
YP_655860.1 NC_008205_p99 protein of an unannotated phage phrog_2057 unknown function unknown function 1 53252 53413
YP_655855.1 NC_008205_p94 protein of an unannotated phage phrog_1869 unknown function unknown function 1 52040 52204
YP_655792.1 NC_008205_p31 protein of an unannotated phage phrog_102 endolysin lysis 1 27499 28500
YP_655776.1 NC_008205_p15 protein of an unannotated phage phrog_106 minor tail protein tail 1 12995 14704
YP_655763.1 NC_008205_p2 protein of an unannotated phage phrog_9 terminase large subunit head and packaging 1 587 2224
YP_655849.1 NC_008205_p88 protein of an unannotated phage phrog_2278 unknown function unknown function 1 50191 50310
YP_655817.1 NC_008205_p56 protein of an unannotated phage phrog_472 WhiB transcriptional factor transcription regulation 1 40550 40834
YP_655857.1 NC_008205_p96 protein of an unannotated phage phrog_3813 unknown function unknown function 1 52365 52622
YP_655805.1 NC_008205_p44 protein of an unannotated phage phrog_66 excisionase and transcriptional regulator integration and excision 1 35844 36041
YP_655829.1 NC_008205_p68 protein of an unannotated phage phrog_2149 replication initiation protein DNA, RNA and nucleotide metabolism 1 44894 45799
YP_655791.1 NC_008205_p30 protein of an unannotated phage phrog_700 endolysin lysis 1 26306 27499
YP_655828.1 NC_008205_p67 protein of an unannotated phage phrog_5500 unknown function unknown function 1 44679 44897
YP_655765.1 NC_008205_p4 protein of an unannotated phage phrog_1522 head maturation protease head and packaging 1 3612 4367
YP_655771.1 NC_008205_p10 protein of an unannotated phage phrog_813 head-tail adaptor connector 1 7112 7516
YP_655784.1 NC_008205_p23 protein of an unannotated phage phrog_2012 minor tail protein tail 1 23615 24253
YP_655801.1 NC_008205_p40 protein of an unannotated phage phrog_2838 transcriptional repressor transcription regulation -1 33512 34183
YP_655851.1 NC_008205_p90 protein of an unannotated phage phrog_6816 unknown function unknown function 1 50582 50824
YP_655789.1 NC_008205_p28 protein of an unannotated phage phrog_1172 unknown function unknown function 1 25862 26002
YP_655847.1 NC_008205_p86 protein of an unannotated phage phrog_1545 unknown function unknown function 1 49831 49968
YP_655843.1 NC_008205_p82 protein of an unannotated phage phrog_13181 unknown function unknown function 1 48971 49174
YP_655864.1 NC_008205_p103 protein of an unannotated phage phrog_854 glucosyltransferase moron, auxiliary metabolic gene and host takeover 1 55601 56224
YP_655793.1 NC_008205_p32 protein of an unannotated phage phrog_443 holin lysis 1 28514 28747
YP_655837.1 NC_008205_p76 protein of an unannotated phage phrog_3647 unknown function unknown function 1 47535 47696
YP_655787.1 NC_008205_p26 protein of an unannotated phage phrog_411 unknown function unknown function 1 25428 25712
YP_655859.1 NC_008205_p98 protein of an unannotated phage phrog_1385 unknown function unknown function 1 53017 53259
YP_655842.1 NC_008205_p81 protein of an unannotated phage phrog_10032 unknown function unknown function 1 48810 48974
YP_655780.1 NC_008205_p19 protein of an unannotated phage phrog_382 minor tail protein with lysin activity tail 1 19917 21803
YP_655852.1 NC_008205_p91 protein of an unannotated phage phrog_2247 unknown function unknown function 1 50821 51075
YP_655812.1 NC_008205_p51 protein of an unannotated phage phrog_3416 unknown function unknown function 1 38126 38875
YP_655778.1 NC_008205_p17 protein of an unannotated phage phrog_732 minor tail protein tail 1 16556 17386
YP_655813.1 NC_008205_p52 protein of an unannotated phage phrog_1849 unknown function unknown function 1 38955 39233
YP_655804.1 NC_008205_p43 protein of an unannotated phage phrog_2025 unknown function unknown function 1 35543 35758
YP_655820.1 NC_008205_p59 protein of an unannotated phage phrog_1834 unknown function unknown function 1 41351 41581
YP_655770.1 NC_008205_p9 protein of an unannotated phage phrog_1929 head-tail connector protein connector 1 6796 7122
YP_655841.1 NC_008205_p80 protein of an unannotated phage phrog_1900 mobile element MPME moron, auxiliary metabolic gene and host takeover 1 48476 48808
YP_655807.1 NC_008205_p46 protein of an unannotated phage phrog_1816 unknown function unknown function 1 36465 36656
YP_655815.1 NC_008205_p54 protein of an unannotated phage phrog_1333 unknown function unknown function 1 39568 40071
YP_655781.1 NC_008205_p20 protein of an unannotated phage phrog_2106 minor tail protein tail 1 21800 22966
YP_655846.1 NC_008205_p85 protein of an unannotated phage phrog_1091 unknown function unknown function 1 49652 49831
YP_655819.1 NC_008205_p58 protein of an unannotated phage phrog_2078 unknown function unknown function 1 41196 41351
YP_655762.1 NC_008205_p1 protein of an unannotated phage phrog_226 minor tail protein tail 1 109 564
YP_655809.1 NC_008205_p48 protein of an unannotated phage phrog_24657 unknown function unknown function 1 36874 37221
YP_655862.1 NC_008205_p101 protein of an unannotated phage phrog_1693 unknown function unknown function 1 54879 55091
YP_655858.1 NC_008205_p97 protein of an unannotated phage phrog_1186 unknown function unknown function 1 52619 53020
YP_655853.1 NC_008205_p92 protein of an unannotated phage phrog_1467 unknown function unknown function 1 51072 51710
YP_655827.1 NC_008205_p66 protein of an unannotated phage phrog_6193 unknown function unknown function 1 44560 44682
YP_655803.1 NC_008205_p42 protein of an unannotated phage phrog_130 anti-repressor Ant transcription regulation 1 34542 35546
YP_655785.1 NC_008205_p24 protein of an unannotated phage phrog_754 minor tail protein tail 1 24250 25074
YP_655833.1 NC_008205_p72 protein of an unannotated phage phrog_11384 unknown function unknown function 1 46457 46744
YP_655767.1 NC_008205_p6 protein of an unannotated phage phrog_267 major head protein head and packaging 1 5064 5885
YP_655797.1 NC_008205_p36 protein of an unannotated phage phrog_1791 unknown function unknown function 1 30202 30492
YP_655848.1 NC_008205_p87 protein of an unannotated phage phrog_5186 unknown function unknown function 1 49965 50138
YP_655779.1 NC_008205_p18 protein of an unannotated phage phrog_346 minor tail protein tail 1 17383 19920
YP_655775.1 NC_008205_p14 protein of an unannotated phage phrog_1942 tail length tape measure protein tail 1 9482 12994
YP_655806.1 NC_008205_p45 protein of an unannotated phage phrog_2021 unknown function unknown function 1 36085 36468
YP_655824.1 NC_008205_p63 protein of an unannotated phage phrog_2070 unknown function unknown function 1 42817 42966
YP_655835.1 NC_008205_p74 protein of an unannotated phage phrog_1573 DNA methyltransferase other 1 46932 47360
YP_655838.1 NC_008205_p77 protein of an unannotated phage phrog_3447 unknown function unknown function 1 47693 47905
YP_655798.1 NC_008205_p37 protein of an unannotated phage phrog_1839 unknown function unknown function 1 30485 30577
YP_655800.1 NC_008205_p39 protein of an unannotated phage phrog_29286 unknown function unknown function -1 32792 33049
YP_655783.1 NC_008205_p22 protein of an unannotated phage singleton unknown function unknown function 1 23444 23602
YP_655773.1 NC_008205_p12 protein of an unannotated phage phrog_621 tail assembly chaperone tail 1 8549 9100
YP_655799.1 NC_008205_p38 protein of an unannotated phage phrog_1 integrase integration and excision 1 31422 32711
YP_655772.1 NC_008205_p11 protein of an unannotated phage phrog_476 major tail protein tail 1 7626 8435
YP_655810.1 NC_008205_p49 protein of an unannotated phage phrog_780 unknown function unknown function 1 37214 37471
YP_655795.1 NC_008205_p34 protein of an unannotated phage phrog_2004 unknown function unknown function 1 29143 29376
YP_655845.1 NC_008205_p84 protein of an unannotated phage phrog_6540 unknown function unknown function 1 49359 49655
YP_655839.1 NC_008205_p78 protein of an unannotated phage phrog_647 unknown function unknown function 1 47902 48186
YP_655788.1 NC_008205_p27 protein of an unannotated phage phrog_932 unknown function unknown function 1 25719 25865
YP_655826.1 NC_008205_p65 protein of an unannotated phage phrog_1311 unknown function unknown function 1 44396 44560
YP_655814.1 NC_008205_p53 protein of an unannotated phage phrog_658 unknown function unknown function 1 39230 39577
YP_655823.1 NC_008205_p62 protein of an unannotated phage phrog_740 HNH endonuclease DNA, RNA and nucleotide metabolism 1 42410 42766
YP_655821.1 NC_008205_p60 protein of an unannotated phage phrog_2632 unknown function unknown function 1 41578 41838
YP_655777.1 NC_008205_p16 protein of an unannotated phage phrog_110 minor tail protein tail 1 14790 16499
YP_655796.1 NC_008205_p35 protein of an unannotated phage phrog_403 DNA polymerase exonuclease subunit DNA, RNA and nucleotide metabolism 1 29363 30184
YP_655794.1 NC_008205_p33 protein of an unannotated phage phrog_404 minor tail protein tail 1 28744 29118
YP_655865.1 NC_008205_p104 protein of an unannotated phage phrog_144 HNH endonuclease DNA, RNA and nucleotide metabolism 1 56224 56550
YP_655831.1 NC_008205_p70 protein of an unannotated phage phrog_2080 unknown function unknown function 1 46151 46375
YP_655825.1 NC_008205_p64 protein of an unannotated phage phrog_116 DNA methyltransferase other 1 42960 44387
YP_655790.1 NC_008205_p29 protein of an unannotated phage phrog_747 unknown function unknown function 1 26076 26309