Genomic map of Phormidium phage Pf-WMP4 (NC_008367)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008367
Definition
Phormidium phage Pf-WMP4, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Podoviridae.
DB of origin
REFSEQ
Length
40938
Host Name
Phormidium
Host domain
Bacteria
Is prophage?
undef
Number of proteins
45
%GC
51.8
Number of singletons
30
Number of paralogs
0

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_762637.1 NC_008367_p7 PfWMP4_07 singleton unknown function unknown function 1 4026 5000
YP_762649.1 NC_008367_p19 DNA polymerase phrog_17 DNA polymerase DNA, RNA and nucleotide metabolism 1 10336 12228
YP_762669.1 NC_008367_p39 PfWMP4_39 phrog_332 head-tail adaptor connector -1 34318 36243
YP_762671.1 NC_008367_p41 PfWMP4_41 singleton unknown function unknown function -1 38001 38513
YP_762652.1 NC_008367_p22 PfWMP4_22 singleton unknown function unknown function 1 13172 13774
YP_762664.1 NC_008367_p34 PfWMP4_34 singleton unknown function unknown function -1 27480 28682
YP_762635.1 NC_008367_p5 PfWMP4_05 singleton unknown function unknown function 1 3240 3422
YP_762663.1 NC_008367_p33 PfWMP4_33 phrog_21656 peptidase other -1 24439 27480
YP_762672.1 NC_008367_p42 PfWMP4_42 singleton unknown function unknown function -1 38531 38965
YP_762655.1 NC_008367_p25 PfWMP4_25 phrog_1990 Cas4-domain exonuclease DNA, RNA and nucleotide metabolism 1 14439 15296
YP_762670.1 NC_008367_p40 PfWMP4_40 phrog_38 terminase large subunit head and packaging -1 36243 37988
YP_762633.1 NC_008367_p3 PfWMP4_03 singleton unknown function unknown function 1 826 1305
YP_762650.1 NC_008367_p20 PfWMP4_20 singleton unknown function unknown function 1 12225 12512
YP_762656.1 NC_008367_p26 PfWMP4_26 singleton unknown function unknown function 1 15293 15487
YP_762675.1 NC_008367_p45 PfWMP4_45 singleton unknown function unknown function -1 40595 40765
YP_762662.1 NC_008367_p32 PfWMP4_32 phrog_832 RNA polymerase ADP-ribosylase DNA, RNA and nucleotide metabolism -1 20060 24439
YP_762667.1 NC_008367_p37 PfWMP4_37 phrog_267 major head protein head and packaging -1 32477 33502
YP_762674.1 NC_008367_p44 PfWMP4_44 singleton unknown function unknown function -1 40332 40598
YP_762643.1 NC_008367_p13 PfWMP4_13 singleton unknown function unknown function 1 8527 8688
YP_762661.1 NC_008367_p31 PfWMP4_31 phrog_19395 tail fiber protein; host specificity tail -1 16920 20063
YP_762636.1 NC_008367_p6 PfWMP4_06 phrog_6355 unknown function unknown function 1 3485 3799
YP_762653.1 NC_008367_p23 PfWMP4_23 singleton unknown function unknown function 1 13815 14114
YP_762645.1 NC_008367_p15 PfWMP4_15 singleton unknown function unknown function 1 8885 9190
YP_762657.1 NC_008367_p27 PfWMP4_27 singleton unknown function unknown function 1 15504 15683
YP_762634.1 NC_008367_p4 PfWMP4_04 singleton unknown function unknown function 1 1426 2055
YP_762665.1 NC_008367_p35 PfWMP4_35 phrog_21185 tail protein tail -1 28685 31723
YP_762668.1 NC_008367_p38 PfWMP4_38 phrog_19777 head scaffolding protein head and packaging -1 33530 34321
YP_762654.1 NC_008367_p24 PfWMP4_24 singleton unknown function unknown function 1 14111 14437
YP_762651.1 NC_008367_p21 PfWMP4_21 singleton unknown function unknown function 1 12831 13010
YP_762640.1 NC_008367_p10 PfWMP4_10 phrog_531 Rnase H DNA, RNA and nucleotide metabolism 1 5977 6480
YP_762641.1 NC_008367_p11 PfWMP4_11 singleton unknown function unknown function 1 6474 6671
YP_762631.1 NC_008367_p1 PfWMP4_01 singleton unknown function unknown function 1 251 409
YP_762644.1 NC_008367_p14 PfWMP4_14 singleton unknown function unknown function 1 8685 8888
YP_762638.1 NC_008367_p8 PfWMP4_08 singleton unknown function unknown function 1 5185 5472
YP_762639.1 NC_008367_p9 PfWMP4_09 singleton unknown function unknown function 1 5457 5984
YP_762646.1 NC_008367_p16 PfWMP4_16 singleton unknown function unknown function 1 9192 9452
YP_762632.1 NC_008367_p2 PfWMP4_02 singleton unknown function unknown function 1 476 739
YP_762673.1 NC_008367_p43 PfWMP4_43 singleton unknown function unknown function -1 39274 40125
YP_762660.1 NC_008367_p30 PfWMP4_30 singleton unknown function unknown function -1 16588 16920
YP_762647.1 NC_008367_p17 PfWMP4_17 phrog_945 endonuclease DNA, RNA and nucleotide metabolism 1 9418 9879
YP_762666.1 NC_008367_p36 PfWMP4_36 phrog_10775 tail protein tail -1 31720 32355
YP_762658.1 NC_008367_p28 PfWMP4_28 singleton unknown function unknown function 1 15795 16100
YP_762659.1 NC_008367_p29 PfWMP4_29 singleton unknown function unknown function 1 16410 16532
YP_762642.1 NC_008367_p12 DNA primase/helicae phrog_239 DNA primase/helicase DNA, RNA and nucleotide metabolism 1 7076 8530
YP_762648.1 NC_008367_p18 PfWMP4_18 singleton unknown function unknown function 1 9876 10358