Genomic map of Lactococcus virus 712 (NC_008370)


functional categories (each PHROG annotation is associated to a category)             Notes   
 
head and packaging     DNA, RNA and nucleotide metabolism     transcription regulation             - one track for each strand
connector integration and excision moron, auxiliary metabolic gene and host takeover             - Mouse over proteins to see their ID and annotations
tail lysis other             - Scroll to zoom
unknown function             - Click on a protein to see its PHROG






More about this genome

Locus
NC_008370
Definition
Lactococcus phage 712, complete genome.
Molecule type
DNA
Genome structure
linear
Taxonomy
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus.
DB of origin
REFSEQ
Length
30510
Host Name
Lactococcus lactis
Host domain
Bacteria
Is prophage?
undef
Number of proteins
55
%GC
33.88
Number of singletons
1
Number of paralogs
1

   List of proteins encoded in this genome

NCBI prot ID PHROG prot ID NCBI prot annotation PHROG number PHROG annotation PHROG category Strand Start End
YP_764290.1 NC_008370_p31 hypothetical protein phrog_4546 unknown function unknown function -1 19979 20089
YP_764302.1 NC_008370_p43 DNA polymerase subunit phrog_1284 unknown function unknown function -1 24566 25462
YP_764285.1 NC_008370_p26 hypothetical protein phrog_10611 unknown function unknown function -1 18567 18713
YP_764266.1 NC_008370_p7 structural protein phrog_1393 minor head protein head and packaging 1 4477 5679
YP_764275.1 NC_008370_p16 tail tape measure phrog_58 tail length tape measure protein tail 1 9323 12322
YP_764274.1 NC_008370_p15 structural protein phrog_1421 virion structural protein head and packaging 1 8811 9323
YP_764263.1 NC_008370_p4 HNH endonuclease phrog_119 HNH endonuclease DNA, RNA and nucleotide metabolism 1 2555 2839
YP_764270.1 NC_008370_p11 structural protein phrog_1440 virion structural protein head and packaging 1 6575 6961
YP_764297.1 NC_008370_p38 hypothetical protein phrog_6484 unknown function unknown function -1 22965 23195
YP_764303.1 NC_008370_p44 hypothetical protein phrog_33906 unknown function unknown function -1 25455 25727
YP_764314.1 NC_008370_p55 hypothetical protein phrog_1652 unknown function unknown function 1 29079 29246
YP_764298.1 NC_008370_p39 hypothetical protein phrog_1449 unknown function unknown function -1 23192 23599
YP_764288.1 NC_008370_p29 hypothetical protein phrog_1509 unknown function unknown function -1 19421 19660
YP_764306.1 NC_008370_p47 hypothetical protein phrog_2413 unknown function unknown function -1 27046 27165
YP_764299.1 NC_008370_p40 hypothetical protein phrog_2228 unknown function unknown function -1 23698 24075
YP_764289.1 NC_008370_p30 hypothetical protein phrog_1825 DNA methyltransferase other -1 19736 19978
YP_764286.1 NC_008370_p27 hypothetical protein phrog_1415 unknown function unknown function -1 18887 19234
YP_764284.1 NC_008370_p25 hypothetical protein phrog_1430 unknown function unknown function -1 18297 18566
YP_764264.1 NC_008370_p5 portal protein phrog_12 portal protein head and packaging 1 2852 3988
YP_764277.1 NC_008370_p18 hypothetical protein phrog_1432 tail associated lysin tail 1 13737 14864
YP_764268.1 NC_008370_p9 structural protein phrog_1429 virion structural protein head and packaging 1 5963 6277
YP_764281.1 NC_008370_p22 lysin phrog_670 endolysin lysis 1 16267 17043
YP_764260.1 NC_008370_p1 terminase small subunit phrog_1437 terminase small subunit head and packaging 1 261 785
YP_764273.1 NC_008370_p14 structural protein phrog_1420 virion structural protein head and packaging 1 8516 8791
YP_764313.1 NC_008370_p54 Holliday junction endonuclease phrog_827 Holliday junction resolvase DNA, RNA and nucleotide metabolism 1 28597 29082
YP_764265.1 NC_008370_p6 protease phrog_80 head maturation protease head and packaging 1 3969 4505
YP_764308.1 NC_008370_p49 hypothetical protein phrog_37398 unknown function unknown function -1 27751 27885
YP_764287.1 NC_008370_p28 hypothetical protein phrog_1441 unknown function unknown function -1 19234 19470
YP_764295.1 NC_008370_p36 hypothetical protein phrog_659 Sak-like ssDNA annealing protein DNA, RNA and nucleotide metabolism -1 22027 22581
YP_764301.1 NC_008370_p42 hypothetical protein phrog_3604 unknown function unknown function -1 24361 24573
YP_764293.1 NC_008370_p34 hypothetical protein phrog_1295 unknown function unknown function -1 21437 21652
YP_764305.1 NC_008370_p46 hypothetical protein phrog_9199 unknown function unknown function -1 26308 26466
YP_764307.1 NC_008370_p48 hypothetical protein phrog_24018 unknown function unknown function -1 27567 27746
YP_764309.1 NC_008370_p50 hypothetical protein phrog_1656 unknown function unknown function -1 27885 28085
YP_764280.1 NC_008370_p21 holin phrog_1379 unknown function unknown function 1 15917 16270
YP_764304.1 NC_008370_p45 hypothetical protein phrog_18661 unknown function unknown function -1 25788 26297
YP_764279.1 NC_008370_p20 receptor binding protein phrog_1630 receptor binding tail protein tail 1 15137 15895
YP_764271.1 NC_008370_p12 structural protein phrog_1433 major tail protein tail 1 6974 7879
YP_764262.1 NC_008370_p3 terminase large subunit phrog_9 terminase large subunit head and packaging 1 943 2565
YP_764312.1 NC_008370_p53 hypothetical protein phrog_1436 unknown function unknown function 1 28469 28600
YP_764278.1 NC_008370_p19 hypothetical protein phrog_1434 unknown function unknown function 1 14839 15147
YP_764292.1 NC_008370_p33 hypothetical protein phrog_1317 unknown function unknown function -1 20931 21440
YP_764283.1 NC_008370_p24 bidirectional terminator phrog_3874 transglycosylase other -1 17663 18235
YP_764272.1 NC_008370_p13 tail accessory fiber/neck passage structure phrog_5983 tail protein tail 1 7881 8495
YP_764269.1 NC_008370_p10 structural protein phrog_1484 virion structural protein head and packaging 1 6267 6605
YP_764311.1 NC_008370_p52 hypothetical protein phrog_1952 unknown function unknown function 1 28336 28464
YP_764276.1 NC_008370_p17 hypothetical protein phrog_1424 tail protein tail 1 12322 13737
YP_764294.1 NC_008370_p35 hypothetical protein phrog_1278 single strand DNA binding protein DNA, RNA and nucleotide metabolism -1 21665 22024
YP_764267.1 NC_008370_p8 structural protein phrog_1428 head-tail connector protein connector 1 5700 5963
YP_764291.1 NC_008370_p32 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 20423 20848
YP_764300.1 NC_008370_p41 hypothetical protein phrog_1405 unknown function unknown function -1 24132 24389
YP_764282.1 NC_008370_p23 HNH endonuclease phrog_59 HNH endonuclease DNA, RNA and nucleotide metabolism -1 17169 17588
YP_764261.1 NC_008370_p2 hypothetical protein phrog_2670 unknown function unknown function 1 782 931
YP_764296.1 NC_008370_p37 hypothetical protein phrog_5462 unknown function unknown function -1 22578 22907
YP_764310.1 NC_008370_p51 hypothetical protein singleton unknown function unknown function -1 28066 28203