| functional categories (each PHROG annotation is associated to a category) | Notes | ||
| head and packaging | DNA, RNA and nucleotide metabolism | transcription regulation | - one track for each strand |
| connector | integration and excision | moron, auxiliary metabolic gene and host takeover | - Mouse over proteins to see their ID and annotations |
| tail | lysis | other | - Scroll to zoom |
| unknown function | - Click on a protein to see its PHROG | ||
Locus |
NC_008370 |
Definition |
Lactococcus phage 712, complete genome. |
Molecule type |
DNA |
Genome structure |
linear |
Taxonomy |
Viruses; Duplodnaviria; Heunggongvirae; Uroviricota; Caudoviricetes; Caudovirales; Siphoviridae; Skunavirus. |
DB of origin |
REFSEQ |
Length |
30510 |
Host Name |
Lactococcus lactis |
Host domain |
Bacteria |
Is prophage? |
undef |
Number of proteins |
55 |
%GC |
33.88 |
Number of singletons |
1 |
Number of paralogs |
1 |
| NCBI prot ID | PHROG prot ID | NCBI prot annotation | PHROG number | PHROG annotation | PHROG category | Strand | Start | End |
|---|---|---|---|---|---|---|---|---|
| YP_764290.1 | NC_008370_p31 | hypothetical protein | phrog_4546 | unknown function | unknown function | -1 | 19979 | 20089 |
| YP_764302.1 | NC_008370_p43 | DNA polymerase subunit | phrog_1284 | unknown function | unknown function | -1 | 24566 | 25462 |
| YP_764285.1 | NC_008370_p26 | hypothetical protein | phrog_10611 | unknown function | unknown function | -1 | 18567 | 18713 |
| YP_764266.1 | NC_008370_p7 | structural protein | phrog_1393 | minor head protein | head and packaging | 1 | 4477 | 5679 |
| YP_764275.1 | NC_008370_p16 | tail tape measure | phrog_58 | tail length tape measure protein | tail | 1 | 9323 | 12322 |
| YP_764274.1 | NC_008370_p15 | structural protein | phrog_1421 | virion structural protein | head and packaging | 1 | 8811 | 9323 |
| YP_764263.1 | NC_008370_p4 | HNH endonuclease | phrog_119 | HNH endonuclease | DNA, RNA and nucleotide metabolism | 1 | 2555 | 2839 |
| YP_764270.1 | NC_008370_p11 | structural protein | phrog_1440 | virion structural protein | head and packaging | 1 | 6575 | 6961 |
| YP_764297.1 | NC_008370_p38 | hypothetical protein | phrog_6484 | unknown function | unknown function | -1 | 22965 | 23195 |
| YP_764303.1 | NC_008370_p44 | hypothetical protein | phrog_33906 | unknown function | unknown function | -1 | 25455 | 25727 |
| YP_764314.1 | NC_008370_p55 | hypothetical protein | phrog_1652 | unknown function | unknown function | 1 | 29079 | 29246 |
| YP_764298.1 | NC_008370_p39 | hypothetical protein | phrog_1449 | unknown function | unknown function | -1 | 23192 | 23599 |
| YP_764288.1 | NC_008370_p29 | hypothetical protein | phrog_1509 | unknown function | unknown function | -1 | 19421 | 19660 |
| YP_764306.1 | NC_008370_p47 | hypothetical protein | phrog_2413 | unknown function | unknown function | -1 | 27046 | 27165 |
| YP_764299.1 | NC_008370_p40 | hypothetical protein | phrog_2228 | unknown function | unknown function | -1 | 23698 | 24075 |
| YP_764289.1 | NC_008370_p30 | hypothetical protein | phrog_1825 | DNA methyltransferase | other | -1 | 19736 | 19978 |
| YP_764286.1 | NC_008370_p27 | hypothetical protein | phrog_1415 | unknown function | unknown function | -1 | 18887 | 19234 |
| YP_764284.1 | NC_008370_p25 | hypothetical protein | phrog_1430 | unknown function | unknown function | -1 | 18297 | 18566 |
| YP_764264.1 | NC_008370_p5 | portal protein | phrog_12 | portal protein | head and packaging | 1 | 2852 | 3988 |
| YP_764277.1 | NC_008370_p18 | hypothetical protein | phrog_1432 | tail associated lysin | tail | 1 | 13737 | 14864 |
| YP_764268.1 | NC_008370_p9 | structural protein | phrog_1429 | virion structural protein | head and packaging | 1 | 5963 | 6277 |
| YP_764281.1 | NC_008370_p22 | lysin | phrog_670 | endolysin | lysis | 1 | 16267 | 17043 |
| YP_764260.1 | NC_008370_p1 | terminase small subunit | phrog_1437 | terminase small subunit | head and packaging | 1 | 261 | 785 |
| YP_764273.1 | NC_008370_p14 | structural protein | phrog_1420 | virion structural protein | head and packaging | 1 | 8516 | 8791 |
| YP_764313.1 | NC_008370_p54 | Holliday junction endonuclease | phrog_827 | Holliday junction resolvase | DNA, RNA and nucleotide metabolism | 1 | 28597 | 29082 |
| YP_764265.1 | NC_008370_p6 | protease | phrog_80 | head maturation protease | head and packaging | 1 | 3969 | 4505 |
| YP_764308.1 | NC_008370_p49 | hypothetical protein | phrog_37398 | unknown function | unknown function | -1 | 27751 | 27885 |
| YP_764287.1 | NC_008370_p28 | hypothetical protein | phrog_1441 | unknown function | unknown function | -1 | 19234 | 19470 |
| YP_764295.1 | NC_008370_p36 | hypothetical protein | phrog_659 | Sak-like ssDNA annealing protein | DNA, RNA and nucleotide metabolism | -1 | 22027 | 22581 |
| YP_764301.1 | NC_008370_p42 | hypothetical protein | phrog_3604 | unknown function | unknown function | -1 | 24361 | 24573 |
| YP_764293.1 | NC_008370_p34 | hypothetical protein | phrog_1295 | unknown function | unknown function | -1 | 21437 | 21652 |
| YP_764305.1 | NC_008370_p46 | hypothetical protein | phrog_9199 | unknown function | unknown function | -1 | 26308 | 26466 |
| YP_764307.1 | NC_008370_p48 | hypothetical protein | phrog_24018 | unknown function | unknown function | -1 | 27567 | 27746 |
| YP_764309.1 | NC_008370_p50 | hypothetical protein | phrog_1656 | unknown function | unknown function | -1 | 27885 | 28085 |
| YP_764280.1 | NC_008370_p21 | holin | phrog_1379 | unknown function | unknown function | 1 | 15917 | 16270 |
| YP_764304.1 | NC_008370_p45 | hypothetical protein | phrog_18661 | unknown function | unknown function | -1 | 25788 | 26297 |
| YP_764279.1 | NC_008370_p20 | receptor binding protein | phrog_1630 | receptor binding tail protein | tail | 1 | 15137 | 15895 |
| YP_764271.1 | NC_008370_p12 | structural protein | phrog_1433 | major tail protein | tail | 1 | 6974 | 7879 |
| YP_764262.1 | NC_008370_p3 | terminase large subunit | phrog_9 | terminase large subunit | head and packaging | 1 | 943 | 2565 |
| YP_764312.1 | NC_008370_p53 | hypothetical protein | phrog_1436 | unknown function | unknown function | 1 | 28469 | 28600 |
| YP_764278.1 | NC_008370_p19 | hypothetical protein | phrog_1434 | unknown function | unknown function | 1 | 14839 | 15147 |
| YP_764292.1 | NC_008370_p33 | hypothetical protein | phrog_1317 | unknown function | unknown function | -1 | 20931 | 21440 |
| YP_764283.1 | NC_008370_p24 | bidirectional terminator | phrog_3874 | transglycosylase | other | -1 | 17663 | 18235 |
| YP_764272.1 | NC_008370_p13 | tail accessory fiber/neck passage structure | phrog_5983 | tail protein | tail | 1 | 7881 | 8495 |
| YP_764269.1 | NC_008370_p10 | structural protein | phrog_1484 | virion structural protein | head and packaging | 1 | 6267 | 6605 |
| YP_764311.1 | NC_008370_p52 | hypothetical protein | phrog_1952 | unknown function | unknown function | 1 | 28336 | 28464 |
| YP_764276.1 | NC_008370_p17 | hypothetical protein | phrog_1424 | tail protein | tail | 1 | 12322 | 13737 |
| YP_764294.1 | NC_008370_p35 | hypothetical protein | phrog_1278 | single strand DNA binding protein | DNA, RNA and nucleotide metabolism | -1 | 21665 | 22024 |
| YP_764267.1 | NC_008370_p8 | structural protein | phrog_1428 | head-tail connector protein | connector | 1 | 5700 | 5963 |
| YP_764291.1 | NC_008370_p32 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 20423 | 20848 |
| YP_764300.1 | NC_008370_p41 | hypothetical protein | phrog_1405 | unknown function | unknown function | -1 | 24132 | 24389 |
| YP_764282.1 | NC_008370_p23 | HNH endonuclease | phrog_59 | HNH endonuclease | DNA, RNA and nucleotide metabolism | -1 | 17169 | 17588 |
| YP_764261.1 | NC_008370_p2 | hypothetical protein | phrog_2670 | unknown function | unknown function | 1 | 782 | 931 |
| YP_764296.1 | NC_008370_p37 | hypothetical protein | phrog_5462 | unknown function | unknown function | -1 | 22578 | 22907 |
| YP_764310.1 | NC_008370_p51 | hypothetical protein | singleton | unknown function | unknown function | -1 | 28066 | 28203 |